EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000017409 (Gene tree)
Gene ID: 102003603
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 1-like 2
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 603 bases
Position: chrJH722051.1:918685-919287
Accession: 102003603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000025334	RRM_5	PF13893.6	2.1e-06	1	1
ENSCLAP00000025334	RRM_1	PF00076.22	3.9e-43	1	2
ENSCLAP00000025334	RRM_1	PF00076.22	3.9e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000025583	-	603	XM_005414600	ENSCLAP00000025334	200 (aa)	XP_005414657	UPI00038EA685

Gene Model

Click here to download ENSCLAG00000017409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000017409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000017409	-	79	32.203	ENSCLAG00000001273	TIAL1	76	32.000
ENSCLAG00000017409	-	99	74.619	ENSCLAG00000011899	PABPC4	58	74.619
ENSCLAG00000017409	-	98	61.224	ENSCLAG00000017628	PABPC4L	98	61.224
ENSCLAG00000017409	-	99	68.528	ENSCLAG00000005298	PABPC1L	59	68.528
ENSCLAG00000017409	-	98	56.771	ENSCLAG00000000647	PABPC5	93	57.143
ENSCLAG00000017409	-	85	32.895	ENSCLAG00000007826	ELAVL1	94	32.895
ENSCLAG00000017409	-	98	73.571	ENSCLAG00000009676	PABPC1	54	73.571
ENSCLAG00000017409	-	100	100.000	ENSCLAG00000017412	-	100	100.000
ENSCLAG00000017409	-	97	30.303	ENSCLAG00000009857	TIA1	85	30.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000017409	-	100	95.500	ENSG00000186288	PABPC1L2A	100	95.500	Homo_sapiens
ENSCLAG00000017409	-	100	95.500	ENSG00000184388	PABPC1L2B	100	95.500	Homo_sapiens
ENSCLAG00000017409	-	98	77.551	ENSAPOG00000017776	pabpc1b	60	77.551	Acanthochromis_polyacanthus
ENSCLAG00000017409	-	98	78.061	ENSAPOG00000015105	pabpc1a	58	78.061	Acanthochromis_polyacanthus
ENSCLAG00000017409	-	100	96.000	ENSAMEG00000019441	-	100	96.000	Ailuropoda_melanoleuca
ENSCLAG00000017409	-	98	78.061	ENSACIG00000004685	pabpc1a	58	78.061	Amphilophus_citrinellus
ENSCLAG00000017409	-	98	77.551	ENSACIG00000018366	pabpc1b	59	77.551	Amphilophus_citrinellus
ENSCLAG00000017409	-	98	78.061	ENSAOCG00000011656	pabpc1a	58	78.061	Amphiprion_ocellaris
ENSCLAG00000017409	-	98	77.551	ENSAOCG00000019839	pabpc1b	58	77.551	Amphiprion_ocellaris
ENSCLAG00000017409	-	98	77.551	ENSAPEG00000010435	pabpc1b	58	77.551	Amphiprion_percula
ENSCLAG00000017409	-	98	78.061	ENSAPEG00000006963	pabpc1a	58	78.061	Amphiprion_percula
ENSCLAG00000017409	-	98	78.061	ENSATEG00000012917	pabpc1b	58	78.061	Anabas_testudineus
ENSCLAG00000017409	-	98	78.061	ENSATEG00000024852	pabpc1a	58	78.061	Anabas_testudineus
ENSCLAG00000017409	-	100	95.500	ENSANAG00000019429	-	100	95.500	Aotus_nancymaae
ENSCLAG00000017409	-	100	95.500	ENSANAG00000019431	-	100	95.500	Aotus_nancymaae
ENSCLAG00000017409	-	98	78.061	ENSACLG00000009399	pabpc1a	68	76.667	Astatotilapia_calliptera
ENSCLAG00000017409	-	98	77.041	ENSACLG00000014335	pabpc1b	58	77.041	Astatotilapia_calliptera
ENSCLAG00000017409	-	98	77.551	ENSAMXG00000008599	pabpc1b	58	77.551	Astyanax_mexicanus
ENSCLAG00000017409	-	100	96.500	ENSBTAG00000052491	-	94	96.500	Bos_taurus
ENSCLAG00000017409	-	100	96.000	ENSBTAG00000050902	-	95	96.000	Bos_taurus
ENSCLAG00000017409	-	100	95.500	ENSCJAG00000041326	-	100	95.500	Callithrix_jacchus
ENSCLAG00000017409	-	100	96.000	ENSCAFG00020002052	-	96	96.000	Canis_lupus_dingo
ENSCLAG00000017409	-	100	95.500	ENSCHIG00000006283	-	100	95.500	Capra_hircus
ENSCLAG00000017409	-	100	96.000	ENSCHIG00000011138	-	100	96.000	Capra_hircus
ENSCLAG00000017409	-	100	96.000	ENSTSYG00000001775	-	100	96.000	Carlito_syrichta
ENSCLAG00000017409	-	100	96.500	ENSCPOG00000009525	-	100	96.500	Cavia_porcellus
ENSCLAG00000017409	-	100	95.500	ENSCCAG00000031524	-	100	95.500	Cebus_capucinus
ENSCLAG00000017409	-	100	95.500	ENSCATG00000042826	-	100	95.500	Cercocebus_atys
ENSCLAG00000017409	-	100	95.500	ENSCATG00000043125	-	100	95.500	Cercocebus_atys
ENSCLAG00000017409	-	100	95.500	ENSCSAG00000000102	-	100	95.500	Chlorocebus_sabaeus
ENSCLAG00000017409	-	99	92.965	ENSCGRG00001023387	-	98	92.965	Cricetulus_griseus_chok1gshd
ENSCLAG00000017409	-	98	78.061	ENSCSEG00000013324	pabpc1a	58	78.061	Cynoglossus_semilaevis
ENSCLAG00000017409	-	98	77.041	ENSCSEG00000015241	-	58	77.041	Cynoglossus_semilaevis
ENSCLAG00000017409	-	98	78.571	ENSCVAG00000005489	pabpc1b	58	78.571	Cyprinodon_variegatus
ENSCLAG00000017409	-	98	78.061	ENSCVAG00000021872	pabpc1a	58	78.061	Cyprinodon_variegatus
ENSCLAG00000017409	-	98	77.041	ENSDARG00000021140	pabpc1b	99	79.545	Danio_rerio
ENSCLAG00000017409	-	98	77.551	ENSDARG00000017219	pabpc1a	58	77.551	Danio_rerio
ENSCLAG00000017409	-	100	94.500	ENSDNOG00000030926	-	100	94.500	Dasypus_novemcinctus
ENSCLAG00000017409	-	100	95.000	ENSDORG00000011362	-	100	95.000	Dipodomys_ordii
ENSCLAG00000017409	-	100	96.500	ENSEASG00005010399	-	95	96.500	Equus_asinus_asinus
ENSCLAG00000017409	-	100	96.500	ENSECAG00000002620	-	95	96.500	Equus_caballus
ENSCLAG00000017409	-	100	91.500	ENSEEUG00000008203	-	100	91.500	Erinaceus_europaeus
ENSCLAG00000017409	-	98	77.551	ENSELUG00000003614	pabpc1a	60	77.551	Esox_lucius
ENSCLAG00000017409	-	93	55.080	ENSELUG00000005389	-	78	55.080	Esox_lucius
ENSCLAG00000017409	-	98	78.061	ENSELUG00000015062	-	58	78.061	Esox_lucius
ENSCLAG00000017409	-	100	96.000	ENSFCAG00000039701	-	100	96.000	Felis_catus
ENSCLAG00000017409	-	100	96.500	ENSFDAG00000005484	-	100	96.500	Fukomys_damarensis
ENSCLAG00000017409	-	98	78.061	ENSFHEG00000018979	pabpc1a	58	78.061	Fundulus_heteroclitus
ENSCLAG00000017409	-	98	78.061	ENSFHEG00000008186	pabpc1b	58	78.061	Fundulus_heteroclitus
ENSCLAG00000017409	-	98	77.551	ENSGMOG00000002448	-	57	77.551	Gadus_morhua
ENSCLAG00000017409	-	98	77.551	ENSGMOG00000013448	pabpc1a	57	77.551	Gadus_morhua
ENSCLAG00000017409	-	98	78.571	ENSGAFG00000010193	pabpc1b	60	78.571	Gambusia_affinis
ENSCLAG00000017409	-	98	78.061	ENSGAFG00000019750	pabpc1a	61	78.061	Gambusia_affinis
ENSCLAG00000017409	-	98	78.061	ENSGACG00000003572	pabpc1a	58	78.061	Gasterosteus_aculeatus
ENSCLAG00000017409	-	98	78.061	ENSGACG00000003771	pabpc1b	64	78.061	Gasterosteus_aculeatus
ENSCLAG00000017409	-	100	95.500	ENSGGOG00000038606	-	100	95.500	Gorilla_gorilla
ENSCLAG00000017409	-	100	95.500	ENSGGOG00000043933	-	100	95.500	Gorilla_gorilla
ENSCLAG00000017409	-	98	77.041	ENSHBUG00000002075	pabpc1b	60	77.041	Haplochromis_burtoni
ENSCLAG00000017409	-	98	78.061	ENSHBUG00000020487	pabpc1a	68	76.667	Haplochromis_burtoni
ENSCLAG00000017409	-	100	96.500	ENSHGLG00000019668	-	100	96.500	Heterocephalus_glaber_female
ENSCLAG00000017409	-	100	96.500	ENSHGLG00000019762	-	100	96.500	Heterocephalus_glaber_female
ENSCLAG00000017409	-	100	96.500	ENSHGLG00100020854	-	100	96.500	Heterocephalus_glaber_male
ENSCLAG00000017409	-	98	78.061	ENSHCOG00000013502	pabpc1a	58	78.061	Hippocampus_comes
ENSCLAG00000017409	-	95	68.254	ENSHCOG00000003175	pabpc1b	69	67.347	Hippocampus_comes
ENSCLAG00000017409	-	98	77.551	ENSIPUG00000008848	pabpc1a	59	77.551	Ictalurus_punctatus
ENSCLAG00000017409	-	98	59.794	ENSIPUG00000021244	-	52	59.184	Ictalurus_punctatus
ENSCLAG00000017409	-	98	77.551	ENSIPUG00000010791	-	61	77.551	Ictalurus_punctatus
ENSCLAG00000017409	-	100	96.500	ENSSTOG00000022096	-	100	96.500	Ictidomys_tridecemlineatus
ENSCLAG00000017409	-	100	96.500	ENSSTOG00000026028	-	100	96.500	Ictidomys_tridecemlineatus
ENSCLAG00000017409	-	100	96.000	ENSJJAG00000007037	-	100	96.000	Jaculus_jaculus
ENSCLAG00000017409	-	98	78.061	ENSKMAG00000000605	pabpc1a	58	78.061	Kryptolebias_marmoratus
ENSCLAG00000017409	-	98	78.061	ENSKMAG00000008049	pabpc1b	63	78.061	Kryptolebias_marmoratus
ENSCLAG00000017409	-	98	77.551	ENSLBEG00000026845	pabpc1b	58	77.551	Labrus_bergylta
ENSCLAG00000017409	-	98	78.061	ENSLBEG00000024002	-	58	78.061	Labrus_bergylta
ENSCLAG00000017409	-	99	94.975	ENSLAFG00000023096	-	99	94.975	Loxodonta_africana
ENSCLAG00000017409	-	100	95.025	ENSMFAG00000028878	-	100	95.025	Macaca_fascicularis
ENSCLAG00000017409	-	100	95.500	ENSMMUG00000009740	-	100	95.500	Macaca_mulatta
ENSCLAG00000017409	-	100	95.500	ENSMMUG00000037681	-	100	95.500	Macaca_mulatta
ENSCLAG00000017409	-	100	95.500	ENSMMUG00000039929	-	100	95.500	Macaca_mulatta
ENSCLAG00000017409	-	100	95.500	ENSMNEG00000037732	-	100	95.500	Macaca_nemestrina
ENSCLAG00000017409	-	100	95.500	ENSMLEG00000027495	-	100	95.500	Mandrillus_leucophaeus
ENSCLAG00000017409	-	98	78.061	ENSMAMG00000014610	pabpc1b	59	78.061	Mastacembelus_armatus
ENSCLAG00000017409	-	98	78.061	ENSMAMG00000004502	-	68	76.667	Mastacembelus_armatus
ENSCLAG00000017409	-	98	78.061	ENSMZEG00005025416	pabpc1a	68	76.667	Maylandia_zebra
ENSCLAG00000017409	-	98	77.041	ENSMZEG00005026745	pabpc1b	58	77.041	Maylandia_zebra
ENSCLAG00000017409	-	100	96.500	ENSMICG00000047642	-	100	96.500	Microcebus_murinus
ENSCLAG00000017409	-	98	78.061	ENSMMOG00000018044	pabpc1a	68	76.667	Mola_mola
ENSCLAG00000017409	-	98	77.551	ENSMMOG00000018009	pabpc1b	62	77.551	Mola_mola
ENSCLAG00000017409	-	98	71.939	ENSMODG00000013156	-	58	71.939	Monodelphis_domestica
ENSCLAG00000017409	-	98	66.154	ENSMODG00000015024	-	57	66.154	Monodelphis_domestica
ENSCLAG00000017409	-	98	78.061	ENSMALG00000006066	pabpc1b	63	78.061	Monopterus_albus
ENSCLAG00000017409	-	98	78.061	ENSMALG00000013020	-	62	78.061	Monopterus_albus
ENSCLAG00000017409	-	100	96.500	ENSNGAG00000012688	-	100	96.500	Nannospalax_galili
ENSCLAG00000017409	-	98	77.041	ENSNBRG00000013737	pabpc1b	62	77.041	Neolamprologus_brichardi
ENSCLAG00000017409	-	98	78.061	ENSNBRG00000003068	-	68	76.667	Neolamprologus_brichardi
ENSCLAG00000017409	-	100	95.500	ENSNLEG00000018128	-	100	95.500	Nomascus_leucogenys
ENSCLAG00000017409	-	100	96.000	ENSODEG00000018540	-	100	96.000	Octodon_degus
ENSCLAG00000017409	-	98	77.041	ENSONIG00000002717	pabpc1b	58	77.041	Oreochromis_niloticus
ENSCLAG00000017409	-	98	78.061	ENSONIG00000006871	-	58	78.061	Oreochromis_niloticus
ENSCLAG00000017409	-	100	96.000	ENSOCUG00000002565	-	100	96.000	Oryctolagus_cuniculus
ENSCLAG00000017409	-	98	78.061	ENSORLG00000002691	pabpc1a	68	76.667	Oryzias_latipes
ENSCLAG00000017409	-	98	75.000	ENSORLG00000003008	-	58	75.000	Oryzias_latipes
ENSCLAG00000017409	-	98	75.000	ENSORLG00020022259	-	58	75.000	Oryzias_latipes_hni
ENSCLAG00000017409	-	98	78.061	ENSORLG00020022398	pabpc1a	58	78.061	Oryzias_latipes_hni
ENSCLAG00000017409	-	98	78.061	ENSORLG00015013633	pabpc1	58	78.061	Oryzias_latipes_hsok
ENSCLAG00000017409	-	98	75.000	ENSORLG00015010932	-	58	75.000	Oryzias_latipes_hsok
ENSCLAG00000017409	-	98	78.061	ENSOMEG00000020219	pabpc1a	58	78.061	Oryzias_melastigma
ENSCLAG00000017409	-	98	74.444	ENSOMEG00000013627	pabpc1b	67	74.444	Oryzias_melastigma
ENSCLAG00000017409	-	100	96.500	ENSOGAG00000026047	-	100	96.500	Otolemur_garnettii
ENSCLAG00000017409	-	100	96.500	ENSOGAG00000029513	-	100	96.500	Otolemur_garnettii
ENSCLAG00000017409	-	100	95.500	ENSOARG00000005943	-	100	95.500	Ovis_aries
ENSCLAG00000017409	-	100	95.500	ENSPPAG00000012920	-	100	95.500	Pan_paniscus
ENSCLAG00000017409	-	100	96.000	ENSPPRG00000011804	-	100	96.000	Panthera_pardus
ENSCLAG00000017409	-	100	96.000	ENSPPRG00000011809	-	100	96.000	Panthera_pardus
ENSCLAG00000017409	-	100	95.500	ENSPTRG00000028252	-	100	95.500	Pan_troglodytes
ENSCLAG00000017409	-	100	95.500	ENSPANG00000011549	-	100	95.500	Papio_anubis
ENSCLAG00000017409	-	98	77.551	ENSPKIG00000005676	pabpc1b	58	77.551	Paramormyrops_kingsleyae
ENSCLAG00000017409	-	98	77.041	ENSPMGG00000022487	pabpc1a	75	77.041	Periophthalmus_magnuspinnatus
ENSCLAG00000017409	-	98	78.061	ENSPMGG00000023134	-	79	78.061	Periophthalmus_magnuspinnatus
ENSCLAG00000017409	-	98	78.061	ENSPFOG00000010815	pabpc1a	57	78.061	Poecilia_formosa
ENSCLAG00000017409	-	98	78.061	ENSPFOG00000005917	pabpc1b	58	78.061	Poecilia_formosa
ENSCLAG00000017409	-	98	78.571	ENSPLAG00000001388	pabpc1b	58	78.571	Poecilia_latipinna
ENSCLAG00000017409	-	98	78.061	ENSPLAG00000004114	pabpc1a	58	78.061	Poecilia_latipinna
ENSCLAG00000017409	-	98	78.061	ENSPMEG00000014399	pabpc1b	58	78.061	Poecilia_mexicana
ENSCLAG00000017409	-	98	78.061	ENSPMEG00000001334	pabpc1a	58	78.061	Poecilia_mexicana
ENSCLAG00000017409	-	98	78.571	ENSPREG00000010911	pabpc1b	60	78.571	Poecilia_reticulata
ENSCLAG00000017409	-	98	78.061	ENSPREG00000019595	pabpc1a	91	85.124	Poecilia_reticulata
ENSCLAG00000017409	-	100	95.500	ENSPPYG00000020468	-	100	95.500	Pongo_abelii
ENSCLAG00000017409	-	100	95.000	ENSPCAG00000005308	-	100	95.000	Procavia_capensis
ENSCLAG00000017409	-	100	97.000	ENSPCOG00000026349	-	100	97.000	Propithecus_coquereli
ENSCLAG00000017409	-	100	93.000	ENSPVAG00000016117	-	100	93.000	Pteropus_vampyrus
ENSCLAG00000017409	-	98	77.041	ENSPNYG00000012578	pabpc1b	60	77.041	Pundamilia_nyererei
ENSCLAG00000017409	-	98	78.061	ENSPNYG00000005192	pabpc1a	61	76.667	Pundamilia_nyererei
ENSCLAG00000017409	-	98	76.531	ENSPNAG00000028408	pabpc1a	64	76.531	Pygocentrus_nattereri
ENSCLAG00000017409	-	98	78.061	ENSPNAG00000024626	pabpc1b	58	78.061	Pygocentrus_nattereri
ENSCLAG00000017409	-	98	77.041	ENSRBIG00000028738	-	69	77.041	Rhinopithecus_bieti
ENSCLAG00000017409	-	100	95.500	ENSRBIG00000027173	-	100	95.500	Rhinopithecus_bieti
ENSCLAG00000017409	-	100	95.500	ENSRROG00000017404	-	100	95.500	Rhinopithecus_roxellana
ENSCLAG00000017409	-	98	69.388	ENSSHAG00000000511	-	59	69.388	Sarcophilus_harrisii
ENSCLAG00000017409	-	98	78.061	ENSSFOG00015006662	pabpc1a	58	78.061	Scleropages_formosus
ENSCLAG00000017409	-	87	69.540	ENSSFOG00015019668	-	67	69.540	Scleropages_formosus
ENSCLAG00000017409	-	98	78.061	ENSSFOG00015002752	-	58	78.061	Scleropages_formosus
ENSCLAG00000017409	-	98	78.061	ENSSMAG00000010803	pabpc1a	58	78.061	Scophthalmus_maximus
ENSCLAG00000017409	-	98	78.061	ENSSMAG00000006869	pabpc1b	58	78.061	Scophthalmus_maximus
ENSCLAG00000017409	-	98	78.061	ENSSDUG00000006675	pabpc1a	58	78.061	Seriola_dumerili
ENSCLAG00000017409	-	98	77.551	ENSSDUG00000011965	pabpc1b	58	77.551	Seriola_dumerili
ENSCLAG00000017409	-	98	78.061	ENSSLDG00000011661	pabpc1a	58	78.061	Seriola_lalandi_dorsalis
ENSCLAG00000017409	-	98	77.551	ENSSLDG00000014156	pabpc1b	58	77.551	Seriola_lalandi_dorsalis
ENSCLAG00000017409	-	98	78.061	ENSSPAG00000014453	-	58	78.061	Stegastes_partitus
ENSCLAG00000017409	-	98	77.551	ENSSPAG00000019265	pabpc1b	63	77.551	Stegastes_partitus
ENSCLAG00000017409	-	100	96.000	ENSSSCG00000036336	-	100	96.000	Sus_scrofa
ENSCLAG00000017409	-	100	96.000	ENSSSCG00000032167	-	100	96.000	Sus_scrofa
ENSCLAG00000017409	-	98	79.082	ENSTRUG00000003767	-	59	79.082	Takifugu_rubripes
ENSCLAG00000017409	-	98	78.061	ENSTRUG00000011577	-	58	78.061	Takifugu_rubripes
ENSCLAG00000017409	-	98	79.592	ENSTNIG00000009153	pabpc1b	58	79.592	Tetraodon_nigroviridis
ENSCLAG00000017409	-	98	73.762	ENSTNIG00000013307	pabpc1a	58	73.762	Tetraodon_nigroviridis
ENSCLAG00000017409	-	100	96.000	ENSTTRG00000013181	-	100	96.000	Tursiops_truncatus
ENSCLAG00000017409	-	100	96.000	ENSUAMG00000008089	-	100	96.000	Ursus_americanus
ENSCLAG00000017409	-	98	58.673	ENSUMAG00000023926	-	88	58.163	Ursus_maritimus
ENSCLAG00000017409	-	100	96.000	ENSUMAG00000003364	-	100	96.000	Ursus_maritimus
ENSCLAG00000017409	-	100	95.500	ENSVVUG00000015892	-	97	95.500	Vulpes_vulpes
ENSCLAG00000017409	-	98	78.571	ENSXCOG00000019901	pabpc1b	60	78.571	Xiphophorus_couchianus
ENSCLAG00000017409	-	98	78.061	ENSXCOG00000017066	pabpc1a	61	78.061	Xiphophorus_couchianus
ENSCLAG00000017409	-	98	78.571	ENSXMAG00000003753	pabpc1b	89	78.571	Xiphophorus_maculatus
ENSCLAG00000017409	-	98	78.061	ENSXMAG00000002555	pabpc1a	60	78.061	Xiphophorus_maculatus