EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000017424 (Gene tree)
Gene ID: 102012786
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 53
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 2347 bases
Position: chrJH721969.1:3352604-3354950
Accession: 102012786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000025349	KH_1	PF00013.29	3.1e-12	1	1
ENSCLAP00000025349	DEAD	PF00270.29	6.3e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000025598	-	2347	XM_013506291	ENSCLAP00000025349	673 (aa)	XP_013361745	UPI0006979DE7

Gene Model

Click here to download ENSCLAG00000017424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000017424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000017424	-	60	33.095	ENSCLAG00000015856	DDX47	89	33.095
ENSCLAG00000017424	-	54	32.065	ENSCLAG00000014891	EIF4A2	88	32.317
ENSCLAG00000017424	-	51	30.084	ENSCLAG00000011203	DDX55	59	30.084
ENSCLAG00000017424	-	57	37.563	ENSCLAG00000015404	DDX41	62	37.596
ENSCLAG00000017424	-	58	32.274	ENSCLAG00000012235	DDX21	52	32.274
ENSCLAG00000017424	-	55	31.332	ENSCLAG00000016749	DDX6	77	31.152
ENSCLAG00000017424	-	89	62.852	ENSCLAG00000010261	-	90	62.748
ENSCLAG00000017424	-	57	35.236	ENSCLAG00000000993	DDX3X	61	35.236
ENSCLAG00000017424	-	57	39.614	ENSCLAG00000002986	DDX23	50	39.518
ENSCLAG00000017424	-	55	33.069	ENSCLAG00000012844	DDX49	78	33.069
ENSCLAG00000017424	-	60	33.086	ENSCLAG00000011057	DDX59	63	33.002
ENSCLAG00000017424	-	65	41.535	ENSCLAG00000006874	DDX5	71	41.535
ENSCLAG00000017424	-	53	32.958	ENSCLAG00000014502	EIF4A3	85	32.958
ENSCLAG00000017424	-	65	42.152	ENSCLAG00000017294	DDX17	88	42.553
ENSCLAG00000017424	-	60	37.621	ENSCLAG00000005386	DDX4	54	38.786
ENSCLAG00000017424	-	52	34.426	ENSCLAG00000004684	DDX18	54	34.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000017424	-	91	70.684	ENSAMEG00000019953	-	98	70.684	Ailuropoda_melanoleuca
ENSCLAG00000017424	-	88	70.017	ENSBTAG00000046635	-	93	70.270	Bos_taurus
ENSCLAG00000017424	-	57	72.178	ENSCAFG00020005312	-	82	71.990	Canis_lupus_dingo
ENSCLAG00000017424	-	89	69.167	ENSCHIG00000020582	-	94	70.084	Capra_hircus
ENSCLAG00000017424	-	100	79.198	ENSCPOG00000013960	-	99	79.198	Cavia_porcellus
ENSCLAG00000017424	-	90	69.587	ENSEASG00005001728	-	91	69.587	Equus_asinus_asinus
ENSCLAG00000017424	-	90	69.091	ENSECAG00000035665	-	94	69.091	Equus_caballus
ENSCLAG00000017424	-	90	69.256	ENSECAG00000037015	DDX53	94	69.256	Equus_caballus
ENSCLAG00000017424	-	67	62.693	ENSFDAG00000018215	-	84	66.749	Fukomys_damarensis
ENSCLAG00000017424	-	73	81.059	ENSFDAG00000020660	-	96	81.059	Fukomys_damarensis
ENSCLAG00000017424	-	97	69.139	ENSSTOG00000027719	-	79	72.787	Ictidomys_tridecemlineatus
ENSCLAG00000017424	-	91	67.317	ENSLAFG00000011531	-	95	67.317	Loxodonta_africana
ENSCLAG00000017424	-	89	71.906	ENSMPUG00000019441	-	96	71.476	Mustela_putorius_furo
ENSCLAG00000017424	-	90	67.213	ENSMLUG00000022233	-	98	67.210	Myotis_lucifugus
ENSCLAG00000017424	-	88	67.839	ENSMLUG00000022321	-	94	67.374	Myotis_lucifugus
ENSCLAG00000017424	-	90	69.652	ENSOCUG00000004437	-	92	69.320	Oryctolagus_cuniculus
ENSCLAG00000017424	-	91	68.033	ENSOGAG00000026282	-	94	67.863	Otolemur_garnettii
ENSCLAG00000017424	-	88	70.558	ENSOARG00000016525	-	94	70.558	Ovis_aries
ENSCLAG00000017424	-	87	72.260	ENSPPRG00000011327	-	87	72.260	Panthera_pardus
ENSCLAG00000017424	-	87	72.260	ENSPTIG00000001243	-	87	72.260	Panthera_tigris_altaica
ENSCLAG00000017424	-	91	68.033	ENSPVAG00000001484	-	94	68.033	Pteropus_vampyrus
ENSCLAG00000017424	-	91	70.310	ENSSSCG00000012169	-	95	70.310	Sus_scrofa
ENSCLAG00000017424	-	93	68.379	ENSTBEG00000014650	-	93	69.357	Tupaia_belangeri
ENSCLAG00000017424	-	100	57.903	ENSTTRG00000016514	-	95	60.905	Tursiops_truncatus
ENSCLAG00000017424	-	91	71.824	ENSUAMG00000000177	-	94	71.824	Ursus_americanus
ENSCLAG00000017424	-	55	79.301	ENSUMAG00000011448	-	91	74.092	Ursus_maritimus
ENSCLAG00000017424	-	99	65.327	ENSVPAG00000007860	-	93	69.687	Vicugna_pacos
ENSCLAG00000017424	-	94	67.402	ENSVVUG00000012789	-	95	70.050	Vulpes_vulpes