EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000017623 (Gene tree)
Gene ID: 102015417
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 375 bases
Position: chrJH721957.1:7029557-7029931
Accession: 102015417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000025535	RNA_pol_L_2	PF13656.6	4.8e-28	1	1
ENSCLAP00000025535	RNA_pol_L	PF01193.24	8.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000025797	POLR1D-201	375	XM_005406376	ENSCLAP00000025535	124 (aa)	XP_005406433	-

Gene Model

Click here to download ENSCLAG00000017623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000017623's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000017623	POLR1D	85	33.019	ENSCLAG00000005238	-	88	33.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000017623	POLR1D	100	96.774	ENSG00000186184	POLR1D	100	96.552	Homo_sapiens
ENSCLAG00000017623	POLR1D	90	64.865	ENSAPOG00000021882	polr1d	94	69.000	Acanthochromis_polyacanthus
ENSCLAG00000017623	POLR1D	100	96.774	ENSAMEG00000019095	POLR1D	99	96.774	Ailuropoda_melanoleuca
ENSCLAG00000017623	POLR1D	86	72.222	ENSACIG00000013328	polr1d	94	72.222	Amphilophus_citrinellus
ENSCLAG00000017623	POLR1D	90	67.857	ENSAOCG00000018500	polr1d	98	67.857	Amphiprion_ocellaris
ENSCLAG00000017623	POLR1D	90	66.964	ENSAPEG00000009489	polr1d	98	66.964	Amphiprion_percula
ENSCLAG00000017623	POLR1D	86	67.290	ENSATEG00000019322	polr1d	94	67.290	Anabas_testudineus
ENSCLAG00000017623	POLR1D	90	66.667	ENSACAG00000015753	POLR1D	96	66.667	Anolis_carolinensis
ENSCLAG00000017623	POLR1D	100	96.774	ENSANAG00000024486	POLR1D	93	96.774	Aotus_nancymaae
ENSCLAG00000017623	POLR1D	86	71.028	ENSACLG00000023805	polr1d	94	71.028	Astatotilapia_calliptera
ENSCLAG00000017623	POLR1D	85	67.925	ENSAMXG00000036118	polr1d	92	67.925	Astyanax_mexicanus
ENSCLAG00000017623	POLR1D	100	93.548	ENSBTAG00000033252	-	93	93.548	Bos_taurus
ENSCLAG00000017623	POLR1D	100	93.548	ENSBTAG00000008642	POLR1D	93	93.548	Bos_taurus
ENSCLAG00000017623	POLR1D	66	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSCLAG00000017623	POLR1D	100	97.581	ENSCJAG00000044669	POLR1D	93	97.581	Callithrix_jacchus
ENSCLAG00000017623	POLR1D	100	96.774	ENSCAFG00000006755	POLR1D	93	96.774	Canis_familiaris
ENSCLAG00000017623	POLR1D	100	94.355	ENSCHIG00000021910	POLR1D	93	94.355	Capra_hircus
ENSCLAG00000017623	POLR1D	100	92.742	ENSTSYG00000026817	-	93	92.742	Carlito_syrichta
ENSCLAG00000017623	POLR1D	100	81.746	ENSTSYG00000034852	-	98	82.353	Carlito_syrichta
ENSCLAG00000017623	POLR1D	56	84.058	ENSCAPG00000006058	-	70	84.058	Cavia_aperea
ENSCLAG00000017623	POLR1D	56	85.507	ENSCPOG00000030450	-	70	85.507	Cavia_porcellus
ENSCLAG00000017623	POLR1D	100	75.806	ENSCCAG00000020191	-	92	75.806	Cebus_capucinus
ENSCLAG00000017623	POLR1D	100	95.161	ENSCCAG00000021349	-	93	95.161	Cebus_capucinus
ENSCLAG00000017623	POLR1D	100	95.161	ENSCATG00000030710	-	93	95.161	Cercocebus_atys
ENSCLAG00000017623	POLR1D	100	85.484	ENSCATG00000022900	-	93	85.484	Cercocebus_atys
ENSCLAG00000017623	POLR1D	78	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSCLAG00000017623	POLR1D	100	91.935	ENSCANG00000037694	-	93	91.935	Colobus_angolensis_palliatus
ENSCLAG00000017623	POLR1D	100	95.161	ENSCANG00000028632	-	93	95.161	Colobus_angolensis_palliatus
ENSCLAG00000017623	POLR1D	100	93.548	ENSCGRG00001021251	Polr1d	93	93.548	Cricetulus_griseus_chok1gshd
ENSCLAG00000017623	POLR1D	100	93.548	ENSCGRG00000011639	Polr1d	93	93.548	Cricetulus_griseus_crigri
ENSCLAG00000017623	POLR1D	84	69.231	ENSCSEG00000018268	polr1d	91	69.159	Cynoglossus_semilaevis
ENSCLAG00000017623	POLR1D	85	71.429	ENSCVAG00000018527	polr1d	92	71.429	Cyprinodon_variegatus
ENSCLAG00000017623	POLR1D	89	65.455	ENSDARG00000037570	polr1d	98	65.455	Danio_rerio
ENSCLAG00000017623	POLR1D	100	92.742	ENSDNOG00000046247	-	93	92.742	Dasypus_novemcinctus
ENSCLAG00000017623	POLR1D	100	94.355	ENSDNOG00000043676	-	93	94.355	Dasypus_novemcinctus
ENSCLAG00000017623	POLR1D	100	94.355	ENSDORG00000029155	Polr1d	93	94.355	Dipodomys_ordii
ENSCLAG00000017623	POLR1D	69	43.023	FBgn0086447	l(2)37Cg	81	43.023	Drosophila_melanogaster
ENSCLAG00000017623	POLR1D	100	91.129	ENSETEG00000012797	POLR1D	100	91.129	Echinops_telfairi
ENSCLAG00000017623	POLR1D	69	72.093	ENSEBUG00000011748	polr1d	60	72.093	Eptatretus_burgeri
ENSCLAG00000017623	POLR1D	94	96.581	ENSEASG00005022487	POLR1D	91	96.581	Equus_asinus_asinus
ENSCLAG00000017623	POLR1D	100	95.161	ENSEEUG00000013144	POLR1D	100	95.161	Erinaceus_europaeus
ENSCLAG00000017623	POLR1D	85	68.868	ENSELUG00000005105	rpac2	93	68.868	Esox_lucius
ENSCLAG00000017623	POLR1D	100	95.161	ENSFCAG00000030162	POLR1D	93	95.161	Felis_catus
ENSCLAG00000017623	POLR1D	77	76.042	ENSFALG00000011463	POLR1D	95	76.042	Ficedula_albicollis
ENSCLAG00000017623	POLR1D	100	96.774	ENSFDAG00000004463	POLR1D	93	96.774	Fukomys_damarensis
ENSCLAG00000017623	POLR1D	86	74.074	ENSFHEG00000015410	polr1d	94	74.074	Fundulus_heteroclitus
ENSCLAG00000017623	POLR1D	52	70.312	ENSGALG00000007470	POLR1D	63	70.312	Gallus_gallus
ENSCLAG00000017623	POLR1D	85	72.381	ENSGAFG00000001693	polr1d	92	72.381	Gambusia_affinis
ENSCLAG00000017623	POLR1D	94	67.797	ENSGACG00000018585	polr1d	100	67.797	Gasterosteus_aculeatus
ENSCLAG00000017623	POLR1D	85	78.302	ENSGAGG00000008503	POLR1D	93	78.302	Gopherus_agassizii
ENSCLAG00000017623	POLR1D	100	96.774	ENSGGOG00000004235	POLR1D	93	96.774	Gorilla_gorilla
ENSCLAG00000017623	POLR1D	86	71.028	ENSHBUG00000002111	polr1d	94	71.028	Haplochromis_burtoni
ENSCLAG00000017623	POLR1D	100	96.774	ENSHGLG00000003202	POLR1D	93	96.774	Heterocephalus_glaber_female
ENSCLAG00000017623	POLR1D	100	96.774	ENSHGLG00100009393	POLR1D	93	96.774	Heterocephalus_glaber_male
ENSCLAG00000017623	POLR1D	86	68.224	ENSHCOG00000003258	polr1d	94	68.224	Hippocampus_comes
ENSCLAG00000017623	POLR1D	85	73.333	ENSIPUG00000014810	polr1d	91	73.333	Ictalurus_punctatus
ENSCLAG00000017623	POLR1D	100	97.581	ENSSTOG00000013877	POLR1D	93	97.581	Ictidomys_tridecemlineatus
ENSCLAG00000017623	POLR1D	100	91.935	ENSJJAG00000022671	-	100	91.667	Jaculus_jaculus
ENSCLAG00000017623	POLR1D	100	74.194	ENSJJAG00000021667	-	73	74.194	Jaculus_jaculus
ENSCLAG00000017623	POLR1D	85	66.981	ENSKMAG00000015256	polr1d	93	66.981	Kryptolebias_marmoratus
ENSCLAG00000017623	POLR1D	85	70.476	ENSLBEG00000015919	polr1d	92	70.476	Labrus_bergylta
ENSCLAG00000017623	POLR1D	94	65.517	ENSLACG00000006810	POLR1D	96	65.517	Latimeria_chalumnae
ENSCLAG00000017623	POLR1D	58	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSCLAG00000017623	POLR1D	100	87.903	ENSLAFG00000032290	POLR1D	93	87.903	Loxodonta_africana
ENSCLAG00000017623	POLR1D	100	95.968	ENSMFAG00000045264	POLR1D	96	95.968	Macaca_fascicularis
ENSCLAG00000017623	POLR1D	100	75.000	ENSMMUG00000041570	-	92	75.000	Macaca_mulatta
ENSCLAG00000017623	POLR1D	94	95.690	ENSMMUG00000020386	POLR1D	100	95.690	Macaca_mulatta
ENSCLAG00000017623	POLR1D	100	79.032	ENSMNEG00000038120	-	93	79.032	Macaca_nemestrina
ENSCLAG00000017623	POLR1D	100	95.968	ENSMNEG00000008630	-	93	95.968	Macaca_nemestrina
ENSCLAG00000017623	POLR1D	100	84.677	ENSMLEG00000032251	-	93	84.677	Mandrillus_leucophaeus
ENSCLAG00000017623	POLR1D	100	95.968	ENSMLEG00000041048	-	93	95.968	Mandrillus_leucophaeus
ENSCLAG00000017623	POLR1D	81	70.297	ENSMAMG00000014834	polr1d	94	70.297	Mastacembelus_armatus
ENSCLAG00000017623	POLR1D	82	73.529	ENSMZEG00005006638	polr1d	90	73.529	Maylandia_zebra
ENSCLAG00000017623	POLR1D	74	77.174	ENSMGAG00000005322	POLR1D	84	77.174	Meleagris_gallopavo
ENSCLAG00000017623	POLR1D	100	93.548	ENSMAUG00000001946	Polr1d	93	93.548	Mesocricetus_auratus
ENSCLAG00000017623	POLR1D	100	78.226	ENSMICG00000007349	-	94	78.226	Microcebus_murinus
ENSCLAG00000017623	POLR1D	100	95.968	ENSMICG00000016883	-	93	95.968	Microcebus_murinus
ENSCLAG00000017623	POLR1D	99	92.683	ENSMOCG00000021288	Polr1d	92	92.683	Microtus_ochrogaster
ENSCLAG00000017623	POLR1D	86	68.224	ENSMMOG00000009605	polr1d	94	68.224	Mola_mola
ENSCLAG00000017623	POLR1D	90	80.180	ENSMODG00000023881	POLR1D	97	80.180	Monodelphis_domestica
ENSCLAG00000017623	POLR1D	84	68.269	ENSMALG00000010652	polr1d	91	68.269	Monopterus_albus
ENSCLAG00000017623	POLR1D	100	89.516	MGP_CAROLIEiJ_G0028034	Polr1d	93	89.516	Mus_caroli
ENSCLAG00000017623	POLR1D	100	89.516	ENSMUSG00000029642	Polr1d	93	89.516	Mus_musculus
ENSCLAG00000017623	POLR1D	100	88.710	MGP_PahariEiJ_G0024600	Polr1d	93	88.710	Mus_pahari
ENSCLAG00000017623	POLR1D	100	90.323	MGP_SPRETEiJ_G0029032	Polr1d	93	90.323	Mus_spretus
ENSCLAG00000017623	POLR1D	100	86.290	ENSMLUG00000004118	-	93	86.290	Myotis_lucifugus
ENSCLAG00000017623	POLR1D	100	95.161	ENSMLUG00000027169	-	93	95.161	Myotis_lucifugus
ENSCLAG00000017623	POLR1D	94	94.828	ENSNGAG00000006014	Polr1d	100	94.828	Nannospalax_galili
ENSCLAG00000017623	POLR1D	86	71.028	ENSNBRG00000020327	polr1d	94	71.028	Neolamprologus_brichardi
ENSCLAG00000017623	POLR1D	100	96.774	ENSNLEG00000000358	POLR1D	93	96.774	Nomascus_leucogenys
ENSCLAG00000017623	POLR1D	100	83.065	ENSODEG00000014801	-	92	83.065	Octodon_degus
ENSCLAG00000017623	POLR1D	100	98.387	ENSODEG00000005294	-	93	98.387	Octodon_degus
ENSCLAG00000017623	POLR1D	85	80.952	ENSOANG00000008708	-	97	80.952	Ornithorhynchus_anatinus
ENSCLAG00000017623	POLR1D	100	95.161	ENSOCUG00000015706	POLR1D	76	95.161	Oryctolagus_cuniculus
ENSCLAG00000017623	POLR1D	86	70.093	ENSORLG00000010257	polr1d	94	70.093	Oryzias_latipes
ENSCLAG00000017623	POLR1D	90	67.857	ENSORLG00020000533	polr1d	76	67.857	Oryzias_latipes_hni
ENSCLAG00000017623	POLR1D	92	68.421	ENSORLG00015013267	polr1d	75	68.421	Oryzias_latipes_hsok
ENSCLAG00000017623	POLR1D	95	66.949	ENSOMEG00000014912	polr1d	79	66.949	Oryzias_melastigma
ENSCLAG00000017623	POLR1D	100	95.161	ENSOGAG00000014601	POLR1D	93	95.161	Otolemur_garnettii
ENSCLAG00000017623	POLR1D	100	94.355	ENSOARG00000017005	POLR1D	95	94.355	Ovis_aries
ENSCLAG00000017623	POLR1D	100	95.968	ENSPPAG00000028138	POLR1D	93	95.968	Pan_paniscus
ENSCLAG00000017623	POLR1D	99	95.122	ENSPPRG00000003381	POLR1D	92	95.122	Panthera_pardus
ENSCLAG00000017623	POLR1D	100	95.161	ENSPTIG00000018137	POLR1D	93	95.161	Panthera_tigris_altaica
ENSCLAG00000017623	POLR1D	100	96.774	ENSPTRG00000005734	POLR1D	93	96.774	Pan_troglodytes
ENSCLAG00000017623	POLR1D	100	83.871	ENSPANG00000035051	-	93	83.871	Papio_anubis
ENSCLAG00000017623	POLR1D	100	95.968	ENSPANG00000020259	-	93	95.968	Papio_anubis
ENSCLAG00000017623	POLR1D	93	61.739	ENSPKIG00000021891	polr1d	90	52.212	Paramormyrops_kingsleyae
ENSCLAG00000017623	POLR1D	94	72.650	ENSPSIG00000011822	POLR1D	91	72.650	Pelodiscus_sinensis
ENSCLAG00000017623	POLR1D	90	66.964	ENSPMGG00000010359	polr1d	97	66.964	Periophthalmus_magnuspinnatus
ENSCLAG00000017623	POLR1D	94	58.974	ENSPMGG00000012998	POLR1D	86	58.974	Periophthalmus_magnuspinnatus
ENSCLAG00000017623	POLR1D	100	91.935	ENSPEMG00000006336	-	95	91.935	Peromyscus_maniculatus_bairdii
ENSCLAG00000017623	POLR1D	88	60.550	ENSPMAG00000004228	polr1d	92	60.550	Petromyzon_marinus
ENSCLAG00000017623	POLR1D	90	80.180	ENSPCIG00000001673	POLR1D	97	80.180	Phascolarctos_cinereus
ENSCLAG00000017623	POLR1D	85	72.381	ENSPFOG00000023343	polr1d	92	73.750	Poecilia_formosa
ENSCLAG00000017623	POLR1D	85	72.381	ENSPLAG00000009675	polr1d	92	72.381	Poecilia_latipinna
ENSCLAG00000017623	POLR1D	85	72.381	ENSPMEG00000004628	polr1d	92	72.381	Poecilia_mexicana
ENSCLAG00000017623	POLR1D	85	72.381	ENSPREG00000022032	polr1d	92	72.381	Poecilia_reticulata
ENSCLAG00000017623	POLR1D	100	95.968	ENSPCOG00000028175	POLR1D	93	95.968	Propithecus_coquereli
ENSCLAG00000017623	POLR1D	86	71.028	ENSPNYG00000000107	polr1d	94	71.028	Pundamilia_nyererei
ENSCLAG00000017623	POLR1D	81	67.327	ENSPNAG00000001512	polr1d	87	66.346	Pygocentrus_nattereri
ENSCLAG00000017623	POLR1D	100	92.742	ENSRBIG00000000336	-	93	92.742	Rhinopithecus_bieti
ENSCLAG00000017623	POLR1D	100	95.968	ENSRBIG00000036378	-	93	95.968	Rhinopithecus_bieti
ENSCLAG00000017623	POLR1D	100	92.742	ENSRROG00000026751	-	93	92.742	Rhinopithecus_roxellana
ENSCLAG00000017623	POLR1D	100	95.968	ENSRROG00000042232	-	93	95.968	Rhinopithecus_roxellana
ENSCLAG00000017623	POLR1D	73	53.846	YNL113W	RPC19	77	47.706	Saccharomyces_cerevisiae
ENSCLAG00000017623	POLR1D	100	96.774	ENSSBOG00000028482	-	93	96.774	Saimiri_boliviensis_boliviensis
ENSCLAG00000017623	POLR1D	85	92.381	ENSSBOG00000030146	-	77	92.381	Saimiri_boliviensis_boliviensis
ENSCLAG00000017623	POLR1D	92	76.316	ENSSHAG00000001190	POLR1D	88	76.316	Sarcophilus_harrisii
ENSCLAG00000017623	POLR1D	90	70.270	ENSSFOG00015011375	polr1d	97	70.270	Scleropages_formosus
ENSCLAG00000017623	POLR1D	86	68.224	ENSSMAG00000011861	polr1d	94	68.224	Scophthalmus_maximus
ENSCLAG00000017623	POLR1D	86	67.290	ENSSDUG00000011930	polr1d	94	67.290	Seriola_dumerili
ENSCLAG00000017623	POLR1D	93	61.739	ENSSLDG00000023871	polr1d	97	61.739	Seriola_lalandi_dorsalis
ENSCLAG00000017623	POLR1D	100	95.161	ENSSARG00000007840	POLR1D	93	95.161	Sorex_araneus
ENSCLAG00000017623	POLR1D	85	76.190	ENSSPUG00000005786	POLR1D	95	72.973	Sphenodon_punctatus
ENSCLAG00000017623	POLR1D	85	72.381	ENSSPAG00000011764	polr1d	92	72.381	Stegastes_partitus
ENSCLAG00000017623	POLR1D	100	94.355	ENSSSCG00000009310	POLR1D	93	94.355	Sus_scrofa
ENSCLAG00000017623	POLR1D	77	76.042	ENSTGUG00000005450	POLR1D	100	76.042	Taeniopygia_guttata
ENSCLAG00000017623	POLR1D	84	67.308	ENSTRUG00000019741	polr1d	91	67.308	Takifugu_rubripes
ENSCLAG00000017623	POLR1D	100	94.355	ENSTBEG00000007006	POLR1D	100	94.355	Tupaia_belangeri
ENSCLAG00000017623	POLR1D	100	96.774	ENSUAMG00000011413	POLR1D	93	96.774	Ursus_americanus
ENSCLAG00000017623	POLR1D	100	96.774	ENSUMAG00000016968	POLR1D	97	96.774	Ursus_maritimus
ENSCLAG00000017623	POLR1D	100	96.774	ENSVVUG00000009216	POLR1D	93	96.774	Vulpes_vulpes
ENSCLAG00000017623	POLR1D	79	74.490	ENSXCOG00000011731	polr1d	75	74.490	Xiphophorus_couchianus
ENSCLAG00000017623	POLR1D	79	74.490	ENSXMAG00000017538	polr1d	75	74.490	Xiphophorus_maculatus