EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000017916 (Gene tree)
Gene ID: 102004730
Gene Symbol: CSTF2T
Alias: CstF-64T|DKFZp434C1013|KIAA0689|tauCstF-64
Full Name: cleavage stimulation factor subunit 2 tau variant
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 1920 bases
Position: chrJH721885.1:6832580-6834499
Accession: 102004730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000025790	RRM_1	PF00076.22	4.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000026090	CSTF2T-201	1920	XM_005385903	ENSCLAP00000025790	639 (aa)	XP_005385960	UPI00038E95E7

Gene Model

Click here to download ENSCLAG00000017916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000017916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000017916	CSTF2T	99	66.771	ENSCLAG00000001904	CSTF2	89	86.503

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000017916	CSTF2T	100	89.062	ENSG00000177613	CSTF2T	100	88.750	Homo_sapiens
ENSCLAG00000017916	CSTF2T	100	87.011	ENSAMEG00000015766	CSTF2T	100	87.011	Ailuropoda_melanoleuca
ENSCLAG00000017916	CSTF2T	55	79.320	ENSANAG00000027508	-	89	78.249	Aotus_nancymaae
ENSCLAG00000017916	CSTF2T	100	84.337	ENSBTAG00000018406	CSTF2T	100	84.940	Bos_taurus
ENSCLAG00000017916	CSTF2T	55	71.955	ENSCJAG00000039083	-	93	71.955	Callithrix_jacchus
ENSCLAG00000017916	CSTF2T	55	78.754	ENSCJAG00000011554	-	97	77.620	Callithrix_jacchus
ENSCLAG00000017916	CSTF2T	92	100.000	ENSCAFG00000015567	CSTF2T	99	95.918	Canis_familiaris
ENSCLAG00000017916	CSTF2T	100	83.409	ENSCHIG00000016590	CSTF2T	100	84.323	Capra_hircus
ENSCLAG00000017916	CSTF2T	100	88.889	ENSTSYG00000007750	CSTF2T	100	89.202	Carlito_syrichta
ENSCLAG00000017916	CSTF2T	100	90.557	ENSCPOG00000004195	CSTF2T	100	91.420	Cavia_porcellus
ENSCLAG00000017916	CSTF2T	55	78.187	ENSCCAG00000020816	-	88	78.249	Cebus_capucinus
ENSCLAG00000017916	CSTF2T	55	78.754	ENSCATG00000041868	-	95	78.754	Cercocebus_atys
ENSCLAG00000017916	CSTF2T	100	90.000	ENSCSAG00000018437	CSTF2T	100	90.000	Chlorocebus_sabaeus
ENSCLAG00000017916	CSTF2T	70	88.535	ENSCHOG00000011888	-	68	88.535	Choloepus_hoffmanni
ENSCLAG00000017916	CSTF2T	54	77.874	ENSCANG00000005843	-	92	78.161	Colobus_angolensis_palliatus
ENSCLAG00000017916	CSTF2T	100	84.251	ENSCGRG00001003222	Cstf2t	100	84.709	Cricetulus_griseus_chok1gshd
ENSCLAG00000017916	CSTF2T	100	85.145	ENSCGRG00000008682	Cstf2t	100	85.605	Cricetulus_griseus_crigri
ENSCLAG00000017916	CSTF2T	52	90.355	ENSCSEG00000002596	-	89	85.000	Cynoglossus_semilaevis
ENSCLAG00000017916	CSTF2T	100	86.250	ENSDNOG00000003283	CSTF2T	100	86.875	Dasypus_novemcinctus
ENSCLAG00000017916	CSTF2T	82	87.097	ENSDORG00000011245	Cstf2t	100	85.540	Dipodomys_ordii
ENSCLAG00000017916	CSTF2T	100	88.820	ENSEASG00005012929	CSTF2T	100	89.441	Equus_asinus_asinus
ENSCLAG00000017916	CSTF2T	100	88.752	ENSECAG00000004701	CSTF2T	100	88.752	Equus_caballus
ENSCLAG00000017916	CSTF2T	81	82.456	ENSELUG00000004079	-	77	88.660	Esox_lucius
ENSCLAG00000017916	CSTF2T	100	89.358	ENSFCAG00000046300	CSTF2T	100	89.358	Felis_catus
ENSCLAG00000017916	CSTF2T	100	87.328	ENSFDAG00000021170	CSTF2T	100	91.756	Fukomys_damarensis
ENSCLAG00000017916	CSTF2T	100	87.656	ENSGGOG00000036416	-	100	87.812	Gorilla_gorilla
ENSCLAG00000017916	CSTF2T	100	87.656	ENSGGOG00000042388	-	100	87.812	Gorilla_gorilla
ENSCLAG00000017916	CSTF2T	82	92.060	ENSHGLG00000015478	CSTF2T	100	92.061	Heterocephalus_glaber_female
ENSCLAG00000017916	CSTF2T	82	92.060	ENSHGLG00100000336	CSTF2T	100	91.921	Heterocephalus_glaber_male
ENSCLAG00000017916	CSTF2T	100	89.358	ENSSTOG00000026303	CSTF2T	100	89.358	Ictidomys_tridecemlineatus
ENSCLAG00000017916	CSTF2T	100	81.690	ENSLAFG00000002058	CSTF2T	100	82.629	Loxodonta_africana
ENSCLAG00000017916	CSTF2T	54	78.779	ENSMFAG00000042009	-	97	78.779	Macaca_fascicularis
ENSCLAG00000017916	CSTF2T	55	78.249	ENSMMUG00000042906	-	99	78.249	Macaca_mulatta
ENSCLAG00000017916	CSTF2T	54	78.779	ENSMNEG00000031410	-	97	78.779	Macaca_nemestrina
ENSCLAG00000017916	CSTF2T	100	87.344	ENSMAUG00000006359	Cstf2t	100	85.000	Mesocricetus_auratus
ENSCLAG00000017916	CSTF2T	100	88.144	ENSMICG00000000867	-	100	86.895	Microcebus_murinus
ENSCLAG00000017916	CSTF2T	100	81.288	ENSMICG00000030551	-	100	82.993	Microcebus_murinus
ENSCLAG00000017916	CSTF2T	100	86.022	ENSMOCG00000020428	Cstf2t	100	86.636	Microtus_ochrogaster
ENSCLAG00000017916	CSTF2T	100	84.006	MGP_CAROLIEiJ_G0022872	Cstf2t	100	84.317	Mus_caroli
ENSCLAG00000017916	CSTF2T	83	87.547	ENSMUSG00000053536	Cstf2t	100	86.371	Mus_musculus
ENSCLAG00000017916	CSTF2T	83	87.736	MGP_PahariEiJ_G0014365	Cstf2t	100	86.830	Mus_pahari
ENSCLAG00000017916	CSTF2T	100	83.920	MGP_SPRETEiJ_G0023790	Cstf2t	100	86.677	Mus_spretus
ENSCLAG00000017916	CSTF2T	100	88.263	ENSMPUG00000020141	CSTF2T	100	88.576	Mustela_putorius_furo
ENSCLAG00000017916	CSTF2T	100	80.031	ENSMLUG00000027140	-	100	79.407	Myotis_lucifugus
ENSCLAG00000017916	CSTF2T	100	83.033	ENSMLUG00000011187	-	100	83.333	Myotis_lucifugus
ENSCLAG00000017916	CSTF2T	100	88.612	ENSNGAG00000003304	Cstf2t	100	87.988	Nannospalax_galili
ENSCLAG00000017916	CSTF2T	100	85.692	ENSNLEG00000012025	CSTF2T	100	85.381	Nomascus_leucogenys
ENSCLAG00000017916	CSTF2T	100	88.144	ENSODEG00000012386	CSTF2T	100	86.895	Octodon_degus
ENSCLAG00000017916	CSTF2T	100	78.247	ENSOCUG00000004647	-	100	78.247	Oryctolagus_cuniculus
ENSCLAG00000017916	CSTF2T	100	89.515	ENSOGAG00000014565	CSTF2T	100	89.828	Otolemur_garnettii
ENSCLAG00000017916	CSTF2T	100	83.886	ENSOARG00000013688	-	100	84.789	Ovis_aries
ENSCLAG00000017916	CSTF2T	100	84.733	ENSOARG00000019124	-	100	85.954	Ovis_aries
ENSCLAG00000017916	CSTF2T	54	77.011	ENSPPAG00000032242	-	96	77.586	Pan_paniscus
ENSCLAG00000017916	CSTF2T	100	89.045	ENSPPRG00000018659	CSTF2T	100	89.202	Panthera_pardus
ENSCLAG00000017916	CSTF2T	59	89.333	ENSPTIG00000021145	CSTF2T	100	85.935	Panthera_tigris_altaica
ENSCLAG00000017916	CSTF2T	54	77.011	ENSPTRG00000043097	-	96	77.586	Pan_troglodytes
ENSCLAG00000017916	CSTF2T	54	78.779	ENSPANG00000029734	-	97	78.779	Papio_anubis
ENSCLAG00000017916	CSTF2T	100	89.302	ENSPPYG00000002441	CSTF2T	100	89.147	Pongo_abelii
ENSCLAG00000017916	CSTF2T	100	87.383	ENSPCAG00000000046	CSTF2T	100	88.785	Procavia_capensis
ENSCLAG00000017916	CSTF2T	99	86.364	ENSPCOG00000010982	CSTF2T	99	86.207	Propithecus_coquereli
ENSCLAG00000017916	CSTF2T	100	88.732	ENSPVAG00000006274	CSTF2T	100	87.950	Pteropus_vampyrus
ENSCLAG00000017916	CSTF2T	100	87.907	ENSRNOG00000050289	Cstf2t	100	87.907	Rattus_norvegicus
ENSCLAG00000017916	CSTF2T	100	88.594	ENSRBIG00000029324	CSTF2T	100	88.594	Rhinopithecus_bieti
ENSCLAG00000017916	CSTF2T	100	88.750	ENSRROG00000042507	CSTF2T	100	88.750	Rhinopithecus_roxellana
ENSCLAG00000017916	CSTF2T	100	88.106	ENSSBOG00000022638	CSTF2T	100	88.576	Saimiri_boliviensis_boliviensis
ENSCLAG00000017916	CSTF2T	88	87.676	ENSSARG00000002013	-	87	87.676	Sorex_araneus
ENSCLAG00000017916	CSTF2T	61	83.406	ENSSPAG00000009247	-	96	52.087	Stegastes_partitus
ENSCLAG00000017916	CSTF2T	100	90.141	ENSSSCG00000010430	CSTF2T	100	89.671	Sus_scrofa
ENSCLAG00000017916	CSTF2T	100	79.186	ENSTBEG00000014379	CSTF2T	100	78.717	Tupaia_belangeri
ENSCLAG00000017916	CSTF2T	100	89.671	ENSTTRG00000003341	CSTF2T	100	90.141	Tursiops_truncatus
ENSCLAG00000017916	CSTF2T	100	84.940	ENSUMAG00000011141	CSTF2T	100	85.542	Ursus_maritimus
ENSCLAG00000017916	CSTF2T	62	95.522	ENSVVUG00000002575	CSTF2T	95	95.146	Vulpes_vulpes