EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000000137 (Gene tree)
Gene ID: 101954020
Gene Symbol: POC1B
Alias: FLJ14923|TUWD12|WDR51B
Full Name: POC1 centriolar protein B
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 146356 bases
Position: chr1:9772451-9918806
Accession: 30836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000000135	eIF2A	PF08662.11	2.7e-08	1	1
ENSCPBP00000000145	eIF2A	PF08662.11	4.4e-08	1	1
ENSCPBP00000000154	eIF2A	PF08662.11	7e-08	1	1
ENSCPBP00000000160	eIF2A	PF08662.11	7e-08	1	1
ENSCPBP00000000164	eIF2A	PF08662.11	9.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000000205	POC1B-203	1588	XM_005279130	ENSCPBP00000000154	440 (aa)	XP_005279187	UPI0003891383
ENSCPBT00000000217	POC1B-205	2118	-	ENSCPBP00000000164	473 (aa)	-	-
ENSCPBT00000000196	POC1B-202	1537	XM_005279129	ENSCPBP00000000145	482 (aa)	XP_005279186	UPI000389096D
ENSCPBT00000000182	POC1B-201	1613	-	ENSCPBP00000000135	434 (aa)	XP_005279191	UPI0003890883
ENSCPBT00000000211	POC1B-204	1484	XM_005279131	ENSCPBP00000000160	440 (aa)	XP_005279188	UPI0003891383

Gene Model

Click here to download ENSCPBG00000000137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000000137's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000000137	POC1B	62	33.735	ENSCPBG00000026050	DCAF13	68	33.735
ENSCPBG00000000137	POC1B	67	68.266	ENSCPBG00000016728	POC1A	98	69.444
ENSCPBG00000000137	POC1B	60	30.290	ENSCPBG00000027061	PRPF19	56	30.290
ENSCPBG00000000137	POC1B	68	32.386	ENSCPBG00000026959	KATNB1	50	33.486
ENSCPBG00000000137	POC1B	71	31.615	ENSCPBG00000021091	WDR5B	91	31.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000000137	POC1B	99	62.838	ENSG00000139323	POC1B	98	72.340	Homo_sapiens
ENSCPBG00000000137	POC1B	98	63.470	ENSAMEG00000001812	POC1B	98	63.636	Ailuropoda_melanoleuca
ENSCPBG00000000137	POC1B	99	62.443	ENSANAG00000023816	POC1B	99	61.934	Aotus_nancymaae
ENSCPBG00000000137	POC1B	99	64.237	ENSBTAG00000000687	POC1B	99	64.399	Bos_taurus
ENSCPBG00000000137	POC1B	99	62.838	ENSCJAG00000019637	POC1B	99	62.346	Callithrix_jacchus
ENSCPBG00000000137	POC1B	98	64.450	ENSCAFG00000006105	POC1B	97	64.450	Canis_familiaris
ENSCPBG00000000137	POC1B	98	64.450	ENSCAFG00020016403	POC1B	98	64.450	Canis_lupus_dingo
ENSCPBG00000000137	POC1B	99	63.348	ENSCHIG00000026402	POC1B	99	63.410	Capra_hircus
ENSCPBG00000000137	POC1B	83	70.914	ENSTSYG00000010732	POC1B	97	66.253	Carlito_syrichta
ENSCPBG00000000137	POC1B	98	56.651	ENSCAPG00000015652	POC1B	98	56.651	Cavia_aperea
ENSCPBG00000000137	POC1B	99	63.522	ENSCPOG00000015525	POC1B	99	63.278	Cavia_porcellus
ENSCPBG00000000137	POC1B	99	63.288	ENSCATG00000036201	POC1B	99	62.963	Cercocebus_atys
ENSCPBG00000000137	POC1B	99	64.027	ENSCLAG00000006831	POC1B	99	63.801	Chinchilla_lanigera
ENSCPBG00000000137	POC1B	99	61.416	ENSCSAG00000003775	POC1B	99	60.494	Chlorocebus_sabaeus
ENSCPBG00000000137	POC1B	99	63.063	ENSCANG00000043354	POC1B	99	62.757	Colobus_angolensis_palliatus
ENSCPBG00000000137	POC1B	99	64.480	ENSDNOG00000011916	POC1B	99	64.706	Dasypus_novemcinctus
ENSCPBG00000000137	POC1B	99	64.033	ENSDORG00000013903	Poc1b	99	64.241	Dipodomys_ordii
ENSCPBG00000000137	POC1B	99	63.575	ENSEASG00005019319	POC1B	99	63.348	Equus_asinus_asinus
ENSCPBG00000000137	POC1B	99	63.348	ENSECAG00000013326	POC1B	99	63.122	Equus_caballus
ENSCPBG00000000137	POC1B	99	63.205	ENSFCAG00000007623	POC1B	99	62.838	Felis_catus
ENSCPBG00000000137	POC1B	98	66.744	ENSFALG00000010636	POC1B	89	64.069	Ficedula_albicollis
ENSCPBG00000000137	POC1B	99	63.326	ENSFDAG00000020160	POC1B	99	63.098	Fukomys_damarensis
ENSCPBG00000000137	POC1B	82	94.118	ENSGAGG00000013124	POC1B	99	94.118	Gopherus_agassizii
ENSCPBG00000000137	POC1B	99	62.613	ENSGGOG00000008572	POC1B	99	62.140	Gorilla_gorilla
ENSCPBG00000000137	POC1B	99	63.946	ENSHGLG00000014556	POC1B	99	63.719	Heterocephalus_glaber_female
ENSCPBG00000000137	POC1B	99	63.946	ENSHGLG00100000295	POC1B	99	62.100	Heterocephalus_glaber_male
ENSCPBG00000000137	POC1B	99	61.503	ENSSTOG00000006306	POC1B	99	61.312	Ictidomys_tridecemlineatus
ENSCPBG00000000137	POC1B	99	61.263	ENSJJAG00000013503	Poc1b	98	60.373	Jaculus_jaculus
ENSCPBG00000000137	POC1B	99	61.618	ENSLOCG00000016379	POC1B	97	61.191	Lepisosteus_oculatus
ENSCPBG00000000137	POC1B	99	64.853	ENSLAFG00000017550	POC1B	99	64.644	Loxodonta_africana
ENSCPBG00000000137	POC1B	99	63.288	ENSMFAG00000043490	POC1B	99	62.963	Macaca_fascicularis
ENSCPBG00000000137	POC1B	99	63.288	ENSMNEG00000040128	POC1B	99	62.963	Macaca_nemestrina
ENSCPBG00000000137	POC1B	99	63.288	ENSMLEG00000031700	POC1B	99	62.963	Mandrillus_leucophaeus
ENSCPBG00000000137	POC1B	99	61.263	ENSMOCG00000015822	Poc1b	99	61.345	Microtus_ochrogaster
ENSCPBG00000000137	POC1B	98	61.660	ENSMODG00000009882	POC1B	99	61.462	Monodelphis_domestica
ENSCPBG00000000137	POC1B	99	58.691	MGP_PahariEiJ_G0031323	Poc1b	99	58.333	Mus_pahari
ENSCPBG00000000137	POC1B	99	64.167	ENSMPUG00000007581	POC1B	99	64.315	Mustela_putorius_furo
ENSCPBG00000000137	POC1B	99	63.946	ENSMLUG00000002893	POC1B	99	63.265	Myotis_lucifugus
ENSCPBG00000000137	POC1B	99	61.458	ENSNGAG00000019321	Poc1b	99	61.250	Nannospalax_galili
ENSCPBG00000000137	POC1B	99	63.739	ENSNLEG00000034847	POC1B	99	62.757	Nomascus_leucogenys
ENSCPBG00000000137	POC1B	99	63.575	ENSODEG00000009236	POC1B	99	63.466	Octodon_degus
ENSCPBG00000000137	POC1B	100	68.409	ENSOANG00000006637	POC1B	100	67.955	Ornithorhynchus_anatinus
ENSCPBG00000000137	POC1B	99	63.554	ENSOCUG00000008219	POC1B	99	63.326	Oryctolagus_cuniculus
ENSCPBG00000000137	POC1B	99	63.348	ENSOARG00000015648	POC1B	99	63.374	Ovis_aries
ENSCPBG00000000137	POC1B	99	62.838	ENSPPAG00000030897	POC1B	99	62.346	Pan_paniscus
ENSCPBG00000000137	POC1B	99	62.980	ENSPPRG00000006168	POC1B	99	62.613	Panthera_pardus
ENSCPBG00000000137	POC1B	99	62.980	ENSPTIG00000019536	POC1B	99	62.613	Panthera_tigris_altaica
ENSCPBG00000000137	POC1B	99	62.838	ENSPTRG00000005284	POC1B	99	62.346	Pan_troglodytes
ENSCPBG00000000137	POC1B	99	63.063	ENSPANG00000015875	POC1B	99	62.757	Papio_anubis
ENSCPBG00000000137	POC1B	100	90.682	ENSPSIG00000004298	POC1B	99	89.937	Pelodiscus_sinensis
ENSCPBG00000000137	POC1B	66	76.829	ENSPCIG00000014731	-	90	76.829	Phascolarctos_cinereus
ENSCPBG00000000137	POC1B	99	62.613	ENSPPYG00000004819	POC1B	99	62.140	Pongo_abelii
ENSCPBG00000000137	POC1B	99	49.420	ENSPCAG00000002158	POC1B	99	48.554	Procavia_capensis
ENSCPBG00000000137	POC1B	99	63.864	ENSPVAG00000011562	POC1B	99	64.027	Pteropus_vampyrus
ENSCPBG00000000137	POC1B	99	58.246	ENSPNAG00000026557	POC1B	96	58.038	Pygocentrus_nattereri
ENSCPBG00000000137	POC1B	99	61.187	ENSRBIG00000001080	POC1B	99	59.792	Rhinopithecus_bieti
ENSCPBG00000000137	POC1B	99	63.431	ENSRROG00000044376	POC1B	99	63.093	Rhinopithecus_roxellana
ENSCPBG00000000137	POC1B	99	62.670	ENSSBOG00000023395	POC1B	99	62.346	Saimiri_boliviensis_boliviensis
ENSCPBG00000000137	POC1B	99	56.762	ENSSARG00000010807	POC1B	99	56.762	Sorex_araneus
ENSCPBG00000000137	POC1B	99	65.073	ENSSSCG00000000920	POC1B	99	65.227	Sus_scrofa
ENSCPBG00000000137	POC1B	99	64.009	ENSTGUG00000008063	POC1B	99	62.815	Taeniopygia_guttata
ENSCPBG00000000137	POC1B	98	58.756	ENSTBEG00000014216	POC1B	100	59.039	Tupaia_belangeri
ENSCPBG00000000137	POC1B	99	64.237	ENSTTRG00000002513	POC1B	99	63.975	Tursiops_truncatus
ENSCPBG00000000137	POC1B	99	63.466	ENSUAMG00000006889	POC1B	99	63.693	Ursus_americanus
ENSCPBG00000000137	POC1B	98	63.470	ENSUMAG00000002434	POC1B	98	63.636	Ursus_maritimus
ENSCPBG00000000137	POC1B	80	77.778	ENSVPAG00000001441	POC1B	82	77.778	Vicugna_pacos
ENSCPBG00000000137	POC1B	74	71.649	ENSVVUG00000011627	-	93	71.649	Vulpes_vulpes
ENSCPBG00000000137	POC1B	100	60.581	ENSXETG00000021865	poc1b	97	68.120	Xenopus_tropicalis