EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000000147 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 131969 bases
Position: chr15:16709248-16841216
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000000257	TUDOR	PF00567.24	9.8e-32	1	2
ENSCPBP00000000257	TUDOR	PF00567.24	9.8e-32	2	2
ENSCPBP00000000249	TUDOR	PF00567.24	1.1e-31	1	2
ENSCPBP00000000249	TUDOR	PF00567.24	1.1e-31	2	2
ENSCPBP00000000257	DEAD	PF00270.29	1.3e-08	1	1
ENSCPBP00000000249	DEAD	PF00270.29	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000000339	-	3096	-	ENSCPBP00000000257	1031 (aa)	-	-
ENSCPBT00000000327	-	3399	-	ENSCPBP00000000249	1132 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000000147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000000147's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000000147	-	86	44.787	ENSAPOG00000006421	tdrd12	86	44.787	Acanthochromis_polyacanthus
ENSCPBG00000000147	-	69	65.090	ENSAMEG00000015440	-	92	71.812	Ailuropoda_melanoleuca
ENSCPBG00000000147	-	92	41.010	ENSACIG00000021652	tdrd12	98	41.010	Amphilophus_citrinellus
ENSCPBG00000000147	-	95	38.180	ENSAOCG00000016463	tdrd12	94	38.091	Amphiprion_ocellaris
ENSCPBG00000000147	-	95	39.251	ENSAPEG00000015105	tdrd12	98	40.653	Amphiprion_percula
ENSCPBG00000000147	-	94	40.594	ENSATEG00000011608	tdrd12	99	40.594	Anabas_testudineus
ENSCPBG00000000147	-	92	69.496	ENSAPLG00000011417	-	97	61.914	Anas_platyrhynchos
ENSCPBG00000000147	-	75	57.705	ENSACAG00000029615	-	92	57.610	Anolis_carolinensis
ENSCPBG00000000147	-	98	64.552	ENSANAG00000023166	-	87	64.552	Aotus_nancymaae
ENSCPBG00000000147	-	93	44.130	ENSAMXG00000013811	tdrd12	98	44.130	Astyanax_mexicanus
ENSCPBG00000000147	-	94	65.690	ENSCJAG00000000763	-	83	65.690	Callithrix_jacchus
ENSCPBG00000000147	-	97	68.605	ENSCAFG00000007505	TDRD12	87	68.482	Canis_familiaris
ENSCPBG00000000147	-	97	68.605	ENSCAFG00020019790	-	85	68.605	Canis_lupus_dingo
ENSCPBG00000000147	-	95	65.354	ENSTSYG00000012034	-	85	65.354	Carlito_syrichta
ENSCPBG00000000147	-	90	67.323	ENSCPOG00000002876	-	87	67.323	Cavia_porcellus
ENSCPBG00000000147	-	94	65.738	ENSCCAG00000037592	-	83	65.738	Cebus_capucinus
ENSCPBG00000000147	-	96	63.551	ENSCATG00000038627	-	85	63.551	Cercocebus_atys
ENSCPBG00000000147	-	97	67.323	ENSCLAG00000012138	-	87	67.323	Chinchilla_lanigera
ENSCPBG00000000147	-	94	65.267	ENSCSAG00000004794	-	83	65.267	Chlorocebus_sabaeus
ENSCPBG00000000147	-	94	63.296	ENSCANG00000040785	-	83	63.296	Colobus_angolensis_palliatus
ENSCPBG00000000147	-	91	67.843	ENSCGRG00001021407	-	87	68.110	Cricetulus_griseus_chok1gshd
ENSCPBG00000000147	-	89	67.647	ENSCGRG00000007286	-	87	67.647	Cricetulus_griseus_crigri
ENSCPBG00000000147	-	86	41.630	ENSCSEG00000001744	-	71	41.630	Cynoglossus_semilaevis
ENSCPBG00000000147	-	63	45.703	ENSCVAG00000004277	tdrd12	90	45.703	Cyprinodon_variegatus
ENSCPBG00000000147	-	90	48.567	ENSDARG00000075217	tdrd12	74	49.559	Danio_rerio
ENSCPBG00000000147	-	97	67.315	ENSDNOG00000017244	-	86	66.412	Dasypus_novemcinctus
ENSCPBG00000000147	-	90	63.376	ENSDORG00000012134	-	89	63.376	Dipodomys_ordii
ENSCPBG00000000147	-	60	63.699	ENSETEG00000015088	-	68	63.699	Echinops_telfairi
ENSCPBG00000000147	-	96	67.829	ENSEASG00005021053	-	85	69.600	Equus_asinus_asinus
ENSCPBG00000000147	-	85	67.677	ENSEEUG00000008457	-	80	67.677	Erinaceus_europaeus
ENSCPBG00000000147	-	91	45.895	ENSELUG00000017494	tdrd12	84	52.788	Esox_lucius
ENSCPBG00000000147	-	98	52.790	ENSFALG00000000259	-	92	52.455	Ficedula_albicollis
ENSCPBG00000000147	-	90	65.902	ENSFDAG00000014797	-	87	65.902	Fukomys_damarensis
ENSCPBG00000000147	-	55	45.082	ENSFHEG00000002884	-	55	45.082	Fundulus_heteroclitus
ENSCPBG00000000147	-	98	52.562	ENSGALG00000004704	-	95	52.212	Gallus_gallus
ENSCPBG00000000147	-	92	43.128	ENSGAFG00000003729	tdrd12	77	43.128	Gambusia_affinis
ENSCPBG00000000147	-	98	89.764	ENSGAGG00000000247	-	95	92.369	Gopherus_agassizii
ENSCPBG00000000147	-	94	65.223	ENSGGOG00000011938	-	85	64.794	Gorilla_gorilla
ENSCPBG00000000147	-	93	42.363	ENSHBUG00000020426	tdrd12	99	42.363	Haplochromis_burtoni
ENSCPBG00000000147	-	90	66.142	ENSHGLG00000015608	-	90	66.142	Heterocephalus_glaber_female
ENSCPBG00000000147	-	92	64.117	ENSHGLG00100008227	-	88	64.117	Heterocephalus_glaber_male
ENSCPBG00000000147	-	92	43.810	ENSIPUG00000016825	tdrd12	82	43.810	Ictalurus_punctatus
ENSCPBG00000000147	-	90	66.242	ENSSTOG00000013638	-	87	66.242	Ictidomys_tridecemlineatus
ENSCPBG00000000147	-	70	44.512	ENSKMAG00000008031	tdrd12	84	44.512	Kryptolebias_marmoratus
ENSCPBG00000000147	-	92	38.949	ENSLBEG00000005601	tdrd12	98	38.949	Labrus_bergylta
ENSCPBG00000000147	-	92	61.472	ENSLACG00000010650	-	87	61.472	Latimeria_chalumnae
ENSCPBG00000000147	-	90	48.889	ENSLOCG00000001690	tdrd12	83	45.033	Lepisosteus_oculatus
ENSCPBG00000000147	-	94	65.126	ENSLAFG00000008698	-	88	65.126	Loxodonta_africana
ENSCPBG00000000147	-	94	65.503	ENSMFAG00000044756	-	83	65.503	Macaca_fascicularis
ENSCPBG00000000147	-	97	65.748	ENSMMUG00000015608	-	83	65.363	Macaca_mulatta
ENSCPBG00000000147	-	94	65.363	ENSMNEG00000043067	-	83	65.748	Macaca_nemestrina
ENSCPBG00000000147	-	92	65.251	ENSMLEG00000042036	-	88	65.251	Mandrillus_leucophaeus
ENSCPBG00000000147	-	86	43.814	ENSMAMG00000013867	tdrd12	84	43.814	Mastacembelus_armatus
ENSCPBG00000000147	-	93	42.613	ENSMZEG00005024214	tdrd12	99	42.613	Maylandia_zebra
ENSCPBG00000000147	-	67	64.058	ENSMGAG00000005627	-	100	64.058	Meleagris_gallopavo
ENSCPBG00000000147	-	89	65.094	ENSMAUG00000013767	-	86	65.094	Mesocricetus_auratus
ENSCPBG00000000147	-	94	65.647	ENSMICG00000003623	-	85	65.647	Microcebus_murinus
ENSCPBG00000000147	-	93	66.369	ENSMOCG00000002366	-	92	66.369	Microtus_ochrogaster
ENSCPBG00000000147	-	95	38.681	ENSMMOG00000018662	tdrd12	99	39.623	Mola_mola
ENSCPBG00000000147	-	90	71.724	ENSMODG00000012286	-	81	71.724	Monodelphis_domestica
ENSCPBG00000000147	-	86	42.268	ENSMALG00000006918	tdrd12	77	42.268	Monopterus_albus
ENSCPBG00000000147	-	94	64.583	MGP_CAROLIEiJ_G0029587	-	97	67.164	Mus_caroli
ENSCPBG00000000147	-	94	64.632	MGP_PahariEiJ_G0012821	-	97	68.159	Mus_pahari
ENSCPBG00000000147	-	94	64.583	MGP_SPRETEiJ_G0030686	-	97	69.347	Mus_spretus
ENSCPBG00000000147	-	94	66.064	ENSMPUG00000007791	-	91	61.724	Mustela_putorius_furo
ENSCPBG00000000147	-	86	68.525	ENSMLUG00000010694	-	89	68.525	Myotis_lucifugus
ENSCPBG00000000147	-	89	66.667	ENSNGAG00000000793	-	86	66.667	Nannospalax_galili
ENSCPBG00000000147	-	67	42.090	ENSNBRG00000017878	-	92	44.848	Neolamprologus_brichardi
ENSCPBG00000000147	-	93	64.525	ENSNLEG00000007635	-	83	64.485	Nomascus_leucogenys
ENSCPBG00000000147	-	62	85.714	ENSMEUG00000014059	-	59	85.714	Notamacropus_eugenii
ENSCPBG00000000147	-	85	67.454	ENSOPRG00000015809	-	79	67.454	Ochotona_princeps
ENSCPBG00000000147	-	90	66.557	ENSODEG00000014443	-	86	66.557	Octodon_degus
ENSCPBG00000000147	-	84	45.495	ENSONIG00000010630	tdrd12	99	36.100	Oreochromis_niloticus
ENSCPBG00000000147	-	54	60.821	ENSOANG00000029707	-	92	60.443	Ornithorhynchus_anatinus
ENSCPBG00000000147	-	90	65.900	ENSOCUG00000016911	-	87	65.900	Oryctolagus_cuniculus
ENSCPBG00000000147	-	97	37.040	ENSORLG00000027859	tdrd12	96	37.128	Oryzias_latipes
ENSCPBG00000000147	-	86	43.787	ENSORLG00015020835	tdrd12	69	43.787	Oryzias_latipes_hsok
ENSCPBG00000000147	-	93	40.570	ENSOMEG00000021862	tdrd12	98	40.570	Oryzias_melastigma
ENSCPBG00000000147	-	94	65.738	ENSOGAG00000001571	-	89	65.738	Otolemur_garnettii
ENSCPBG00000000147	-	97	66.537	ENSOARG00000004254	-	90	66.537	Ovis_aries
ENSCPBG00000000147	-	94	64.944	ENSPPAG00000042284	-	83	64.944	Pan_paniscus
ENSCPBG00000000147	-	94	65.594	ENSPPRG00000002389	-	87	65.594	Panthera_pardus
ENSCPBG00000000147	-	94	65.642	ENSPTRG00000010795	TDRD12	83	65.642	Pan_troglodytes
ENSCPBG00000000147	-	97	65.649	ENSPANG00000001203	-	86	67.411	Papio_anubis
ENSCPBG00000000147	-	86	47.222	ENSPKIG00000006407	tdrd12	69	47.222	Paramormyrops_kingsleyae
ENSCPBG00000000147	-	86	90.551	ENSPSIG00000012970	-	90	90.551	Pelodiscus_sinensis
ENSCPBG00000000147	-	93	40.854	ENSPMGG00000022691	tdrd12	99	40.854	Periophthalmus_magnuspinnatus
ENSCPBG00000000147	-	95	67.054	ENSPEMG00000009233	-	87	69.141	Peromyscus_maniculatus_bairdii
ENSCPBG00000000147	-	97	69.231	ENSPCIG00000020993	-	87	69.231	Phascolarctos_cinereus
ENSCPBG00000000147	-	86	44.412	ENSPFOG00000008184	tdrd12	72	44.412	Poecilia_formosa
ENSCPBG00000000147	-	73	40.597	ENSPMEG00000006420	tdrd12	99	40.597	Poecilia_mexicana
ENSCPBG00000000147	-	75	45.765	ENSPREG00000004916	tdrd12	71	44.860	Poecilia_reticulata
ENSCPBG00000000147	-	96	65.649	ENSPPYG00000009821	-	83	65.649	Pongo_abelii
ENSCPBG00000000147	-	74	64.940	ENSPCAG00000013510	-	70	64.940	Procavia_capensis
ENSCPBG00000000147	-	93	64.507	ENSPCOG00000023600	-	83	64.507	Propithecus_coquereli
ENSCPBG00000000147	-	88	75.897	ENSPVAG00000014599	-	82	75.897	Pteropus_vampyrus
ENSCPBG00000000147	-	93	39.782	ENSPNYG00000022866	tdrd12	99	41.509	Pundamilia_nyererei
ENSCPBG00000000147	-	89	46.686	ENSPNAG00000003413	tdrd12	97	40.860	Pygocentrus_nattereri
ENSCPBG00000000147	-	98	67.910	ENSRNOG00000012719	Tdrd12	87	67.910	Rattus_norvegicus
ENSCPBG00000000147	-	94	63.485	ENSRBIG00000019899	-	84	63.485	Rhinopithecus_bieti
ENSCPBG00000000147	-	94	65.223	ENSRROG00000036351	-	83	65.223	Rhinopithecus_roxellana
ENSCPBG00000000147	-	96	65.223	ENSSBOG00000034916	-	85	65.223	Saimiri_boliviensis_boliviensis
ENSCPBG00000000147	-	93	71.984	ENSSHAG00000002599	-	88	71.984	Sarcophilus_harrisii
ENSCPBG00000000147	-	79	46.078	ENSSFOG00015000297	tdrd12	76	46.078	Scleropages_formosus
ENSCPBG00000000147	-	97	36.418	ENSSMAG00000002870	tdrd12	99	36.779	Scophthalmus_maximus
ENSCPBG00000000147	-	93	41.758	ENSSDUG00000017304	tdrd12	98	41.758	Seriola_dumerili
ENSCPBG00000000147	-	93	40.460	ENSSLDG00000004415	tdrd12	98	40.460	Seriola_lalandi_dorsalis
ENSCPBG00000000147	-	92	63.971	ENSSARG00000005357	-	89	64.103	Sorex_araneus
ENSCPBG00000000147	-	91	72.526	ENSSPUG00000013174	-	91	72.526	Sphenodon_punctatus
ENSCPBG00000000147	-	95	37.364	ENSSPAG00000005706	tdrd12	94	37.364	Stegastes_partitus
ENSCPBG00000000147	-	78	64.028	ENSSSCG00000002857	-	80	64.028	Sus_scrofa
ENSCPBG00000000147	-	63	58.396	ENSTGUG00000009121	-	100	58.396	Taeniopygia_guttata
ENSCPBG00000000147	-	90	36.017	ENSTRUG00000021888	tdrd12	92	41.776	Takifugu_rubripes
ENSCPBG00000000147	-	79	66.667	ENSTBEG00000007609	-	74	66.667	Tupaia_belangeri
ENSCPBG00000000147	-	94	64.771	ENSTTRG00000012206	-	88	64.771	Tursiops_truncatus
ENSCPBG00000000147	-	95	62.838	ENSUAMG00000007298	-	86	62.838	Ursus_americanus
ENSCPBG00000000147	-	95	62.973	ENSUMAG00000014314	-	86	62.973	Ursus_maritimus
ENSCPBG00000000147	-	87	60.630	ENSVPAG00000012051	-	87	60.474	Vicugna_pacos
ENSCPBG00000000147	-	97	68.605	ENSVVUG00000016637	-	86	69.778	Vulpes_vulpes
ENSCPBG00000000147	-	67	49.107	ENSXETG00000031945	-	85	49.107	Xenopus_tropicalis
ENSCPBG00000000147	-	92	41.916	ENSXMAG00000020908	tdrd12	97	41.916	Xiphophorus_maculatus