EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000000343 (Gene tree)
Gene ID: 101946235
Gene Symbol: SKIV2L
Alias: 170A|DDX13|HLP|SKI2W|SKIV2|SKIV2L1
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 18480 bases
Position: chrKK083365.1:14716-33195
Accession: 10898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000001349	rRNA_proc-arch	PF13234.6	1.3e-17	1	1
ENSCPBP00000001369	rRNA_proc-arch	PF13234.6	1.3e-17	1	1
ENSCPBP00000001513	rRNA_proc-arch	PF13234.6	1.2e-16	1	1
ENSCPBP00000001461	rRNA_proc-arch	PF13234.6	1.2e-16	1	1
ENSCPBP00000001513	DEAD	PF00270.29	3.4e-14	1	1
ENSCPBP00000001349	DEAD	PF00270.29	3.5e-14	1	1
ENSCPBP00000001369	DEAD	PF00270.29	3.5e-14	1	1
ENSCPBP00000001461	DEAD	PF00270.29	3.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000001694	SKIV2L-202	3267	-	ENSCPBP00000001369	1088 (aa)	-	-
ENSCPBT00000001670	SKIV2L-201	3264	-	ENSCPBP00000001349	1087 (aa)	-	-
ENSCPBT00000001806	SKIV2L-203	3300	-	ENSCPBP00000001461	1099 (aa)	-	-
ENSCPBT00000001863	SKIV2L-204	3204	-	ENSCPBP00000001513	1067 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000000343's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000000343's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000000343	SKIV2L	68	42.778	ENSCPBG00000026551	MTREX	65	44.253

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000000343	SKIV2L	96	64.912	ENSG00000204351	SKIV2L	87	64.912	Homo_sapiens
ENSCPBG00000000343	SKIV2L	91	66.024	ENSAPOG00000008257	skiv2l	88	58.550	Acanthochromis_polyacanthus
ENSCPBG00000000343	SKIV2L	96	65.232	ENSAMEG00000002078	SKIV2L	87	63.919	Ailuropoda_melanoleuca
ENSCPBG00000000343	SKIV2L	98	56.816	ENSACIG00000016719	skiv2l	89	57.112	Amphilophus_citrinellus
ENSCPBG00000000343	SKIV2L	91	66.368	ENSAOCG00000017352	skiv2l	88	58.468	Amphiprion_ocellaris
ENSCPBG00000000343	SKIV2L	91	66.368	ENSAPEG00000001055	skiv2l	88	58.468	Amphiprion_percula
ENSCPBG00000000343	SKIV2L	92	67.407	ENSATEG00000007601	skiv2l	89	59.457	Anabas_testudineus
ENSCPBG00000000343	SKIV2L	97	78.363	ENSACAG00000011746	SKIV2L	87	78.363	Anolis_carolinensis
ENSCPBG00000000343	SKIV2L	96	65.816	ENSANAG00000037992	SKIV2L	87	65.497	Aotus_nancymaae
ENSCPBG00000000343	SKIV2L	97	62.353	ENSACLG00000006886	skiv2l	89	60.375	Astatotilapia_calliptera
ENSCPBG00000000343	SKIV2L	94	60.920	ENSAMXG00000011517	skiv2l	85	60.920	Astyanax_mexicanus
ENSCPBG00000000343	SKIV2L	96	64.537	ENSBTAG00000005587	SKIV2L	87	64.327	Bos_taurus
ENSCPBG00000000343	SKIV2L	91	44.886	WBGene00008502	skih-2	82	45.143	Caenorhabditis_elegans
ENSCPBG00000000343	SKIV2L	96	65.497	ENSCJAG00000002263	SKIV2L	87	65.497	Callithrix_jacchus
ENSCPBG00000000343	SKIV2L	96	65.017	ENSCAFG00000000679	SKIV2L	87	64.912	Canis_familiaris
ENSCPBG00000000343	SKIV2L	96	65.017	ENSCAFG00020000948	SKIV2L	87	64.912	Canis_lupus_dingo
ENSCPBG00000000343	SKIV2L	96	64.327	ENSCHIG00000012897	SKIV2L	87	64.327	Capra_hircus
ENSCPBG00000000343	SKIV2L	96	64.648	ENSTSYG00000012133	SKIV2L	87	64.327	Carlito_syrichta
ENSCPBG00000000343	SKIV2L	96	64.972	ENSCPOG00000001307	SKIV2L	87	64.327	Cavia_porcellus
ENSCPBG00000000343	SKIV2L	96	65.497	ENSCCAG00000026206	SKIV2L	87	65.497	Cebus_capucinus
ENSCPBG00000000343	SKIV2L	96	65.497	ENSCATG00000036901	SKIV2L	87	65.497	Cercocebus_atys
ENSCPBG00000000343	SKIV2L	96	64.912	ENSCLAG00000007678	SKIV2L	87	64.912	Chinchilla_lanigera
ENSCPBG00000000343	SKIV2L	96	64.558	ENSCSAG00000008988	SKIV2L	87	64.327	Chlorocebus_sabaeus
ENSCPBG00000000343	SKIV2L	89	58.011	ENSCING00000005576	-	86	58.011	Ciona_intestinalis
ENSCPBG00000000343	SKIV2L	96	65.389	ENSCANG00000039709	SKIV2L	87	64.912	Colobus_angolensis_palliatus
ENSCPBG00000000343	SKIV2L	96	65.022	ENSCGRG00001008385	Skiv2l	87	64.327	Cricetulus_griseus_chok1gshd
ENSCPBG00000000343	SKIV2L	91	67.564	ENSCSEG00000011326	skiv2l	89	59.392	Cynoglossus_semilaevis
ENSCPBG00000000343	SKIV2L	99	60.217	ENSCVAG00000003072	skiv2l	84	69.352	Cyprinodon_variegatus
ENSCPBG00000000343	SKIV2L	96	63.372	ENSDARG00000062206	skiv2l	90	58.861	Danio_rerio
ENSCPBG00000000343	SKIV2L	89	66.237	ENSDNOG00000037590	SKIV2L	80	65.497	Dasypus_novemcinctus
ENSCPBG00000000343	SKIV2L	90	52.047	FBgn0039117	tst	83	52.047	Drosophila_melanogaster
ENSCPBG00000000343	SKIV2L	63	81.250	ENSETEG00000009522	SKIV2L	56	83.784	Echinops_telfairi
ENSCPBG00000000343	SKIV2L	90	55.042	ENSEBUG00000013680	-	72	69.140	Eptatretus_burgeri
ENSCPBG00000000343	SKIV2L	90	66.029	ENSEASG00005015534	SKIV2L	87	65.279	Equus_asinus_asinus
ENSCPBG00000000343	SKIV2L	90	64.762	ENSECAG00000021823	SKIV2L	82	64.762	Equus_caballus
ENSCPBG00000000343	SKIV2L	98	64.000	ENSELUG00000000181	skiv2l	84	68.237	Esox_lucius
ENSCPBG00000000343	SKIV2L	96	65.050	ENSFCAG00000004519	SKIV2L	87	64.912	Felis_catus
ENSCPBG00000000343	SKIV2L	95	65.193	ENSFDAG00000009438	SKIV2L	87	65.031	Fukomys_damarensis
ENSCPBG00000000343	SKIV2L	99	59.936	ENSFHEG00000008853	skiv2l	82	69.194	Fundulus_heteroclitus
ENSCPBG00000000343	SKIV2L	99	59.743	ENSGMOG00000005926	skiv2l	89	59.081	Gadus_morhua
ENSCPBG00000000343	SKIV2L	76	61.702	ENSGALG00000035499	SKIV2L	84	62.539	Gallus_gallus
ENSCPBG00000000343	SKIV2L	99	59.506	ENSGAFG00000002382	skiv2l	84	65.268	Gambusia_affinis
ENSCPBG00000000343	SKIV2L	92	66.069	ENSGACG00000002927	skiv2l	84	65.832	Gasterosteus_aculeatus
ENSCPBG00000000343	SKIV2L	58	82.870	ENSGAGG00000015556	SKIV2L	87	82.716	Gopherus_agassizii
ENSCPBG00000000343	SKIV2L	96	64.442	ENSGGOG00000002270	SKIV2L	87	64.327	Gorilla_gorilla
ENSCPBG00000000343	SKIV2L	99	58.754	ENSHBUG00000000726	skiv2l	88	61.276	Haplochromis_burtoni
ENSCPBG00000000343	SKIV2L	96	65.497	ENSHGLG00000016596	SKIV2L	87	65.497	Heterocephalus_glaber_female
ENSCPBG00000000343	SKIV2L	96	65.497	ENSHGLG00100014161	SKIV2L	89	65.497	Heterocephalus_glaber_male
ENSCPBG00000000343	SKIV2L	95	60.187	ENSHCOG00000007191	skiv2l	85	68.513	Hippocampus_comes
ENSCPBG00000000343	SKIV2L	98	59.563	ENSIPUG00000016263	skiv2l	87	59.563	Ictalurus_punctatus
ENSCPBG00000000343	SKIV2L	98	64.572	ENSSTOG00000014596	SKIV2L	87	63.883	Ictidomys_tridecemlineatus
ENSCPBG00000000343	SKIV2L	53	78.363	ENSLACG00000002986	-	50	78.363	Latimeria_chalumnae
ENSCPBG00000000343	SKIV2L	96	64.912	ENSLAFG00000014231	SKIV2L	87	64.912	Loxodonta_africana
ENSCPBG00000000343	SKIV2L	96	64.912	ENSMFAG00000034235	SKIV2L	87	64.912	Macaca_fascicularis
ENSCPBG00000000343	SKIV2L	96	64.912	ENSMMUG00000000736	SKIV2L	87	64.912	Macaca_mulatta
ENSCPBG00000000343	SKIV2L	96	64.912	ENSMNEG00000044474	SKIV2L	87	64.912	Macaca_nemestrina
ENSCPBG00000000343	SKIV2L	96	64.912	ENSMLEG00000030512	SKIV2L	87	64.912	Mandrillus_leucophaeus
ENSCPBG00000000343	SKIV2L	99	60.994	ENSMAMG00000002927	skiv2l	83	69.984	Mastacembelus_armatus
ENSCPBG00000000343	SKIV2L	99	59.227	ENSMZEG00005026415	skiv2l	89	60.265	Maylandia_zebra
ENSCPBG00000000343	SKIV2L	58	53.302	ENSMGAG00000001320	SKIV2L	51	73.171	Meleagris_gallopavo
ENSCPBG00000000343	SKIV2L	96	65.088	ENSMAUG00000018613	Skiv2l	87	64.912	Mesocricetus_auratus
ENSCPBG00000000343	SKIV2L	96	64.912	ENSMICG00000046331	SKIV2L	87	64.912	Microcebus_murinus
ENSCPBG00000000343	SKIV2L	96	64.327	ENSMOCG00000014240	Skiv2l	87	63.953	Microtus_ochrogaster
ENSCPBG00000000343	SKIV2L	99	58.198	ENSMMOG00000014547	skiv2l	83	67.963	Mola_mola
ENSCPBG00000000343	SKIV2L	92	65.593	ENSMODG00000015052	SKIV2L	87	64.630	Monodelphis_domestica
ENSCPBG00000000343	SKIV2L	99	58.124	ENSMALG00000010535	skiv2l	89	57.923	Monopterus_albus
ENSCPBG00000000343	SKIV2L	96	65.506	MGP_CAROLIEiJ_G0021477	Skiv2l	87	64.327	Mus_caroli
ENSCPBG00000000343	SKIV2L	96	65.611	ENSMUSG00000040356	Skiv2l	87	64.327	Mus_musculus
ENSCPBG00000000343	SKIV2L	96	66.191	MGP_PahariEiJ_G0020472	Skiv2l	87	64.327	Mus_pahari
ENSCPBG00000000343	SKIV2L	96	65.611	MGP_SPRETEiJ_G0022382	Skiv2l	87	64.327	Mus_spretus
ENSCPBG00000000343	SKIV2L	96	64.912	ENSMPUG00000010567	SKIV2L	87	64.912	Mustela_putorius_furo
ENSCPBG00000000343	SKIV2L	96	64.912	ENSMLUG00000000628	SKIV2L	87	64.912	Myotis_lucifugus
ENSCPBG00000000343	SKIV2L	99	59.071	ENSNBRG00000018650	skiv2l	89	59.022	Neolamprologus_brichardi
ENSCPBG00000000343	SKIV2L	92	65.052	ENSNLEG00000006451	SKIV2L	84	65.046	Nomascus_leucogenys
ENSCPBG00000000343	SKIV2L	75	83.744	ENSMEUG00000006072	SKIV2L	70	66.427	Notamacropus_eugenii
ENSCPBG00000000343	SKIV2L	96	64.327	ENSOPRG00000003972	SKIV2L	87	64.327	Ochotona_princeps
ENSCPBG00000000343	SKIV2L	96	64.648	ENSODEG00000017516	SKIV2L	87	63.743	Octodon_degus
ENSCPBG00000000343	SKIV2L	99	59.740	ENSONIG00000013500	skiv2l	89	59.934	Oreochromis_niloticus
ENSCPBG00000000343	SKIV2L	96	64.520	ENSOCUG00000007019	SKIV2L	87	64.327	Oryctolagus_cuniculus
ENSCPBG00000000343	SKIV2L	99	60.043	ENSORLG00000002021	skiv2l	89	59.611	Oryzias_latipes
ENSCPBG00000000343	SKIV2L	99	59.936	ENSORLG00020009462	skiv2l	87	62.572	Oryzias_latipes_hni
ENSCPBG00000000343	SKIV2L	99	59.785	ENSORLG00015016750	skiv2l	83	65.938	Oryzias_latipes_hsok
ENSCPBG00000000343	SKIV2L	99	60.281	ENSOMEG00000008531	skiv2l	90	59.719	Oryzias_melastigma
ENSCPBG00000000343	SKIV2L	96	65.160	ENSOGAG00000009578	SKIV2L	87	64.912	Otolemur_garnettii
ENSCPBG00000000343	SKIV2L	96	64.327	ENSOARG00000002411	-	90	64.327	Ovis_aries
ENSCPBG00000000343	SKIV2L	96	64.912	ENSPPAG00000040211	SKIV2L	86	64.912	Pan_paniscus
ENSCPBG00000000343	SKIV2L	96	64.912	ENSPPRG00000005017	SKIV2L	87	64.912	Panthera_pardus
ENSCPBG00000000343	SKIV2L	96	64.912	ENSPTIG00000021656	SKIV2L	87	64.912	Panthera_tigris_altaica
ENSCPBG00000000343	SKIV2L	96	64.912	ENSPTRG00000017997	SKIV2L	87	64.912	Pan_troglodytes
ENSCPBG00000000343	SKIV2L	96	64.912	ENSPANG00000011501	SKIV2L	87	64.912	Papio_anubis
ENSCPBG00000000343	SKIV2L	97	63.158	ENSPKIG00000011876	skiv2l	86	63.158	Paramormyrops_kingsleyae
ENSCPBG00000000343	SKIV2L	96	62.209	ENSPMGG00000019707	skiv2l	81	68.031	Periophthalmus_magnuspinnatus
ENSCPBG00000000343	SKIV2L	96	65.714	ENSPEMG00000019001	Skiv2l	87	64.912	Peromyscus_maniculatus_bairdii
ENSCPBG00000000343	SKIV2L	97	66.376	ENSPCIG00000018792	SKIV2L	87	65.380	Phascolarctos_cinereus
ENSCPBG00000000343	SKIV2L	99	59.096	ENSPFOG00000002424	skiv2l	89	58.811	Poecilia_formosa
ENSCPBG00000000343	SKIV2L	99	59.203	ENSPLAG00000018304	skiv2l	89	58.684	Poecilia_latipinna
ENSCPBG00000000343	SKIV2L	99	58.684	ENSPMEG00000006997	skiv2l	89	58.919	Poecilia_mexicana
ENSCPBG00000000343	SKIV2L	99	58.571	ENSPREG00000002277	skiv2l	83	68.770	Poecilia_reticulata
ENSCPBG00000000343	SKIV2L	96	65.497	ENSPPYG00000016472	SKIV2L	87	65.497	Pongo_abelii
ENSCPBG00000000343	SKIV2L	66	87.179	ENSPCAG00000004178	SKIV2L	58	87.179	Procavia_capensis
ENSCPBG00000000343	SKIV2L	96	65.894	ENSPCOG00000010308	SKIV2L	87	64.912	Propithecus_coquereli
ENSCPBG00000000343	SKIV2L	96	64.912	ENSPVAG00000005136	SKIV2L	87	64.912	Pteropus_vampyrus
ENSCPBG00000000343	SKIV2L	98	60.112	ENSPNYG00000017853	skiv2l	81	68.404	Pundamilia_nyererei
ENSCPBG00000000343	SKIV2L	97	61.494	ENSPNAG00000011823	skiv2l	87	61.494	Pygocentrus_nattereri
ENSCPBG00000000343	SKIV2L	96	65.749	ENSRNOG00000000421	Skiv2l	87	64.327	Rattus_norvegicus
ENSCPBG00000000343	SKIV2L	96	64.497	ENSRBIG00000035485	SKIV2L	86	64.497	Rhinopithecus_bieti
ENSCPBG00000000343	SKIV2L	96	64.912	ENSRROG00000036429	SKIV2L	87	64.912	Rhinopithecus_roxellana
ENSCPBG00000000343	SKIV2L	90	46.552	YLR398C	-	64	46.861	Saccharomyces_cerevisiae
ENSCPBG00000000343	SKIV2L	96	65.497	ENSSBOG00000027920	SKIV2L	87	65.497	Saimiri_boliviensis_boliviensis
ENSCPBG00000000343	SKIV2L	97	64.635	ENSSHAG00000008963	SKIV2L	87	63.675	Sarcophilus_harrisii
ENSCPBG00000000343	SKIV2L	97	63.743	ENSSFOG00015016930	skiv2l	87	63.743	Scleropages_formosus
ENSCPBG00000000343	SKIV2L	99	59.763	ENSSMAG00000020185	skiv2l	90	59.825	Scophthalmus_maximus
ENSCPBG00000000343	SKIV2L	89	70.142	ENSSDUG00000019977	skiv2l	83	69.207	Seriola_dumerili
ENSCPBG00000000343	SKIV2L	85	71.624	ENSSLDG00000024382	skiv2l	80	71.624	Seriola_lalandi_dorsalis
ENSCPBG00000000343	SKIV2L	98	72.613	ENSSPUG00000012945	SKIV2L	88	72.450	Sphenodon_punctatus
ENSCPBG00000000343	SKIV2L	94	59.013	ENSSPAG00000012904	skiv2l	88	59.047	Stegastes_partitus
ENSCPBG00000000343	SKIV2L	97	64.661	ENSSSCG00000001424	SKIV2L	87	64.327	Sus_scrofa
ENSCPBG00000000343	SKIV2L	71	68.801	ENSTRUG00000000966	skiv2l	75	71.084	Takifugu_rubripes
ENSCPBG00000000343	SKIV2L	99	58.728	ENSTNIG00000004382	skiv2l	89	59.086	Tetraodon_nigroviridis
ENSCPBG00000000343	SKIV2L	89	68.632	ENSTBEG00000003462	SKIV2L	80	68.632	Tupaia_belangeri
ENSCPBG00000000343	SKIV2L	96	64.912	ENSTTRG00000005931	SKIV2L	86	64.912	Tursiops_truncatus
ENSCPBG00000000343	SKIV2L	96	65.308	ENSUAMG00000024336	SKIV2L	87	64.912	Ursus_americanus
ENSCPBG00000000343	SKIV2L	90	67.064	ENSUMAG00000012666	SKIV2L	87	65.476	Ursus_maritimus
ENSCPBG00000000343	SKIV2L	96	65.597	ENSVVUG00000022807	SKIV2L	86	64.912	Vulpes_vulpes
ENSCPBG00000000343	SKIV2L	92	70.349	ENSXETG00000010932	skiv2l	82	70.349	Xenopus_tropicalis
ENSCPBG00000000343	SKIV2L	99	60.219	ENSXCOG00000019517	skiv2l	82	66.274	Xiphophorus_couchianus
ENSCPBG00000000343	SKIV2L	99	59.115	ENSXMAG00000014079	skiv2l	89	59.008	Xiphophorus_maculatus