EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000000646 (Gene tree)
Gene ID: 101941949
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 5620 bases
Position: chrKK082979.1:3249994-3255613
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000000851	GTP_EFTU	PF00009.27	1.7e-53	1	1
ENSCPBP00000000851	GTP_EFTU_D2	PF03144.25	7.4e-13	1	1
ENSCPBP00000000851	GTP_EFTU_D3	PF03143.17	3.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000001061	-	1386	-	ENSCPBP00000000851	461 (aa)	XP_005302147	UPI000388F402

Gene Model

Click here to download ENSCPBG00000000646's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000000646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000000646	-	100	96.095	ENSCPBG00000000748	-	100	96.095
ENSCPBG00000000646	-	95	38.041	ENSCPBG00000017635	HBS1L	62	38.041
ENSCPBG00000000646	-	96	37.472	ENSCPBG00000020430	GSPT1	77	37.557
ENSCPBG00000000646	-	99	89.348	ENSCPBG00000027203	EEF1A2	99	89.348
ENSCPBG00000000646	-	99	67.692	ENSCPBG00000020570	-	89	67.692
ENSCPBG00000000646	-	99	90.217	ENSCPBG00000005222	-	99	90.217

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000000646	-	67	85.016	ENSAPOG00000004757	eef1a1l1	99	98.438	Acanthochromis_polyacanthus
ENSCPBG00000000646	-	100	79.610	ENSAMEG00000004317	-	100	79.610	Ailuropoda_melanoleuca
ENSCPBG00000000646	-	100	85.900	ENSAMEG00000009677	-	100	85.900	Ailuropoda_melanoleuca
ENSCPBG00000000646	-	100	86.985	ENSCAFG00000013249	-	100	86.985	Canis_familiaris
ENSCPBG00000000646	-	100	86.985	ENSCAFG00020020007	-	100	86.985	Canis_lupus_dingo
ENSCPBG00000000646	-	99	89.565	ENSDARG00000020850	eef1a1l1	99	89.565	Danio_rerio
ENSCPBG00000000646	-	85	84.518	ENSEASG00005018013	-	99	84.518	Equus_asinus_asinus
ENSCPBG00000000646	-	98	88.546	ENSEASG00005012365	-	99	86.216	Equus_asinus_asinus
ENSCPBG00000000646	-	100	86.768	ENSECAG00000022260	-	100	86.768	Equus_caballus
ENSCPBG00000000646	-	100	89.805	ENSELUG00000023536	eef1a1l1	100	89.805	Esox_lucius
ENSCPBG00000000646	-	100	88.937	ENSFCAG00000030530	-	100	88.937	Felis_catus
ENSCPBG00000000646	-	100	98.482	ENSGAGG00000000648	-	100	98.482	Gopherus_agassizii
ENSCPBG00000000646	-	100	95.879	ENSGAGG00000000642	-	100	95.879	Gopherus_agassizii
ENSCPBG00000000646	-	90	86.441	ENSLBEG00000002790	eef1a1l1	99	86.441	Labrus_bergylta
ENSCPBG00000000646	-	100	88.503	ENSLAFG00000028081	-	99	88.503	Loxodonta_africana
ENSCPBG00000000646	-	100	89.154	ENSLAFG00000025161	-	100	89.154	Loxodonta_africana
ENSCPBG00000000646	-	75	92.775	ENSOANG00000012066	-	100	92.775	Ornithorhynchus_anatinus
ENSCPBG00000000646	-	90	87.651	ENSOMEG00000006888	-	99	87.651	Oryzias_melastigma
ENSCPBG00000000646	-	100	89.154	ENSOARG00000002943	-	100	89.154	Ovis_aries
ENSCPBG00000000646	-	100	85.683	ENSPPRG00000008525	-	100	85.683	Panthera_pardus
ENSCPBG00000000646	-	97	89.038	ENSPPRG00000005678	-	96	89.038	Panthera_pardus
ENSCPBG00000000646	-	100	87.636	ENSPTIG00000006939	-	100	87.636	Panthera_tigris_altaica
ENSCPBG00000000646	-	100	97.614	ENSPSIG00000008610	-	100	97.614	Pelodiscus_sinensis
ENSCPBG00000000646	-	66	97.222	ENSPVAG00000007682	-	65	97.222	Pteropus_vampyrus
ENSCPBG00000000646	-	100	80.260	ENSSMAG00000018455	-	99	80.260	Scophthalmus_maximus
ENSCPBG00000000646	-	100	95.662	ENSSPUG00000003655	-	100	95.662	Sphenodon_punctatus
ENSCPBG00000000646	-	98	84.071	ENSSSCG00000038035	-	100	83.731	Sus_scrofa
ENSCPBG00000000646	-	100	89.588	ENSSSCG00000034113	-	100	89.588	Sus_scrofa
ENSCPBG00000000646	-	100	84.165	ENSUAMG00000008928	-	100	84.165	Ursus_americanus
ENSCPBG00000000646	-	100	76.790	ENSUAMG00000007676	-	100	76.790	Ursus_americanus
ENSCPBG00000000646	-	51	81.702	ENSUAMG00000006085	-	98	81.702	Ursus_americanus
ENSCPBG00000000646	-	100	85.900	ENSUMAG00000013211	-	100	85.900	Ursus_maritimus
ENSCPBG00000000646	-	100	86.768	ENSVVUG00000026886	-	100	86.768	Vulpes_vulpes
ENSCPBG00000000646	-	100	89.371	ENSXETG00000022604	eef1a1o	100	89.371	Xenopus_tropicalis