EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000000666 (Gene tree)
Gene ID: 101950189
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 27156 bases
Position: chr15:17141064-17168219
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000001032	DUF1604	PF07713.13	7.6e-36	1	1
ENSCPBP00000000984	DUF1604	PF07713.13	8.3e-36	1	1
ENSCPBP00000001032	G-patch	PF01585.23	5.4e-06	1	1
ENSCPBP00000000984	G-patch	PF01585.23	5.7e-06	1	1
ENSCPBP00000001261	G-patch	PF01585.23	6e-06	1	1
ENSCPBP00000001221	G-patch	PF01585.23	6.2e-06	1	1
ENSCPBP00000001242	G-patch	PF01585.23	6.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000001563	GPATCH1-205	3643	-	ENSCPBP00000001261	822 (aa)	-	-
ENSCPBT00000001231	GPATCH1-201	2358	-	ENSCPBP00000000984	785 (aa)	-	-
ENSCPBT00000001512	GPATCH1-203	3706	-	ENSCPBP00000001221	843 (aa)	-	UPI000388CDE3
ENSCPBT00000001287	GPATCH1-202	2223	-	ENSCPBP00000001032	740 (aa)	-	-
ENSCPBT00000001536	GPATCH1-204	3706	-	ENSCPBP00000001242	843 (aa)	-	UPI000388CDE3

Gene Model

Click here to download ENSCPBG00000000666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000000666's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000000666	GPATCH1	97	67.141	ENSG00000076650	GPATCH1	78	68.852	Homo_sapiens
ENSCPBG00000000666	GPATCH1	92	70.588	ENSAMEG00000015575	GPATCH1	78	70.588	Ailuropoda_melanoleuca
ENSCPBG00000000666	GPATCH1	91	73.077	ENSAOCG00000006668	gpatch1	72	73.077	Amphiprion_ocellaris
ENSCPBG00000000666	GPATCH1	92	55.823	ENSAPEG00000000026	gpatch1	77	55.121	Amphiprion_percula
ENSCPBG00000000666	GPATCH1	92	54.107	ENSATEG00000014494	gpatch1	79	53.846	Anabas_testudineus
ENSCPBG00000000666	GPATCH1	99	73.555	ENSAPLG00000007584	GPATCH1	90	73.801	Anas_platyrhynchos
ENSCPBG00000000666	GPATCH1	97	67.400	ENSANAG00000027002	GPATCH1	78	69.262	Aotus_nancymaae
ENSCPBG00000000666	GPATCH1	92	54.391	ENSACLG00000024740	gpatch1	77	54.653	Astatotilapia_calliptera
ENSCPBG00000000666	GPATCH1	92	54.615	ENSAMXG00000020177	gpatch1	83	54.604	Astyanax_mexicanus
ENSCPBG00000000666	GPATCH1	92	69.168	ENSBTAG00000000721	GPATCH1	78	69.168	Bos_taurus
ENSCPBG00000000666	GPATCH1	97	67.141	ENSCJAG00000000684	GPATCH1	78	68.989	Callithrix_jacchus
ENSCPBG00000000666	GPATCH1	92	70.999	ENSCAFG00000007457	GPATCH1	66	70.999	Canis_familiaris
ENSCPBG00000000666	GPATCH1	92	70.999	ENSCAFG00020019731	GPATCH1	78	70.999	Canis_lupus_dingo
ENSCPBG00000000666	GPATCH1	92	70.178	ENSCHIG00000019626	GPATCH1	80	70.110	Capra_hircus
ENSCPBG00000000666	GPATCH1	92	65.348	ENSCAPG00000008827	GPATCH1	81	65.348	Cavia_aperea
ENSCPBG00000000666	GPATCH1	92	66.667	ENSCPOG00000024477	GPATCH1	88	61.528	Cavia_porcellus
ENSCPBG00000000666	GPATCH1	97	66.624	ENSCCAG00000024676	GPATCH1	78	68.716	Cebus_capucinus
ENSCPBG00000000666	GPATCH1	92	69.083	ENSCATG00000043637	GPATCH1	78	69.631	Cercocebus_atys
ENSCPBG00000000666	GPATCH1	93	67.072	ENSCLAG00000003395	-	83	66.892	Chinchilla_lanigera
ENSCPBG00000000666	GPATCH1	97	65.589	ENSCSAG00000004743	GPATCH1	78	67.486	Chlorocebus_sabaeus
ENSCPBG00000000666	GPATCH1	91	60.929	ENSCHOG00000012865	GPATCH1	86	59.492	Choloepus_hoffmanni
ENSCPBG00000000666	GPATCH1	92	36.338	ENSCING00000012518	-	81	36.103	Ciona_intestinalis
ENSCPBG00000000666	GPATCH1	82	69.806	ENSCANG00000012540	GPATCH1	82	73.021	Colobus_angolensis_palliatus
ENSCPBG00000000666	GPATCH1	92	67.534	ENSCGRG00001016736	Gpatch1	80	67.534	Cricetulus_griseus_chok1gshd
ENSCPBG00000000666	GPATCH1	92	56.428	ENSCGRG00000005069	Gpatch1	77	56.428	Cricetulus_griseus_crigri
ENSCPBG00000000666	GPATCH1	89	47.929	ENSCSEG00000019456	-	57	75.342	Cynoglossus_semilaevis
ENSCPBG00000000666	GPATCH1	92	54.756	ENSDARG00000033418	gpatch1	78	55.584	Danio_rerio
ENSCPBG00000000666	GPATCH1	92	68.886	ENSDNOG00000005291	GPATCH1	81	68.886	Dasypus_novemcinctus
ENSCPBG00000000666	GPATCH1	97	62.612	ENSDORG00000012546	Gpatch1	81	64.432	Dipodomys_ordii
ENSCPBG00000000666	GPATCH1	93	32.634	FBgn0036386	CG8833	64	34.551	Drosophila_melanogaster
ENSCPBG00000000666	GPATCH1	92	63.365	ENSETEG00000003626	GPATCH1	79	63.365	Echinops_telfairi
ENSCPBG00000000666	GPATCH1	93	36.801	ENSEBUG00000011286	gpatch1	80	36.835	Eptatretus_burgeri
ENSCPBG00000000666	GPATCH1	92	69.146	ENSEASG00005021162	GPATCH1	84	69.146	Equus_asinus_asinus
ENSCPBG00000000666	GPATCH1	92	69.631	ENSECAG00000022743	GPATCH1	76	69.631	Equus_caballus
ENSCPBG00000000666	GPATCH1	81	68.000	ENSEEUG00000012925	GPATCH1	69	67.262	Erinaceus_europaeus
ENSCPBG00000000666	GPATCH1	93	52.865	ENSELUG00000018195	gpatch1	78	53.080	Esox_lucius
ENSCPBG00000000666	GPATCH1	92	68.536	ENSFCAG00000014917	GPATCH1	78	68.536	Felis_catus
ENSCPBG00000000666	GPATCH1	98	73.214	ENSFALG00000007821	GPATCH1	83	73.214	Ficedula_albicollis
ENSCPBG00000000666	GPATCH1	93	68.378	ENSFDAG00000003871	GPATCH1	82	68.132	Fukomys_damarensis
ENSCPBG00000000666	GPATCH1	90	51.613	ENSGMOG00000003830	gpatch1	84	50.985	Gadus_morhua
ENSCPBG00000000666	GPATCH1	98	74.356	ENSGALG00000004839	GPATCH1	86	75.000	Gallus_gallus
ENSCPBG00000000666	GPATCH1	92	51.892	ENSGACG00000017544	gpatch1	82	51.486	Gasterosteus_aculeatus
ENSCPBG00000000666	GPATCH1	98	93.782	ENSGAGG00000010067	GPATCH1	83	93.523	Gopherus_agassizii
ENSCPBG00000000666	GPATCH1	97	67.400	ENSGGOG00000010862	GPATCH1	81	69.399	Gorilla_gorilla
ENSCPBG00000000666	GPATCH1	92	54.342	ENSHBUG00000023462	gpatch1	78	54.868	Haplochromis_burtoni
ENSCPBG00000000666	GPATCH1	95	67.018	ENSHGLG00000009334	GPATCH1	81	65.447	Heterocephalus_glaber_female
ENSCPBG00000000666	GPATCH1	95	67.150	ENSHGLG00100018074	GPATCH1	81	65.536	Heterocephalus_glaber_male
ENSCPBG00000000666	GPATCH1	92	54.522	ENSIPUG00000014977	gpatch1	78	55.078	Ictalurus_punctatus
ENSCPBG00000000666	GPATCH1	92	69.672	ENSSTOG00000003720	GPATCH1	79	69.672	Ictidomys_tridecemlineatus
ENSCPBG00000000666	GPATCH1	92	68.033	ENSJJAG00000023765	Gpatch1	79	68.126	Jaculus_jaculus
ENSCPBG00000000666	GPATCH1	92	53.836	ENSKMAG00000017950	gpatch1	79	53.704	Kryptolebias_marmoratus
ENSCPBG00000000666	GPATCH1	92	51.813	ENSLBEG00000026527	gpatch1	77	52.516	Labrus_bergylta
ENSCPBG00000000666	GPATCH1	92	66.529	ENSLACG00000008130	GPATCH1	88	60.105	Latimeria_chalumnae
ENSCPBG00000000666	GPATCH1	92	57.551	ENSLOCG00000001800	gpatch1	78	57.687	Lepisosteus_oculatus
ENSCPBG00000000666	GPATCH1	92	70.588	ENSLAFG00000013589	GPATCH1	83	70.588	Loxodonta_africana
ENSCPBG00000000666	GPATCH1	97	67.658	ENSMFAG00000034418	GPATCH1	83	69.399	Macaca_fascicularis
ENSCPBG00000000666	GPATCH1	97	67.829	ENSMMUG00000011790	GPATCH1	79	69.577	Macaca_mulatta
ENSCPBG00000000666	GPATCH1	97	67.788	ENSMNEG00000045084	GPATCH1	80	69.536	Macaca_nemestrina
ENSCPBG00000000666	GPATCH1	87	61.183	ENSMLEG00000043840	GPATCH1	83	63.135	Mandrillus_leucophaeus
ENSCPBG00000000666	GPATCH1	92	54.391	ENSMZEG00005001926	gpatch1	77	54.653	Maylandia_zebra
ENSCPBG00000000666	GPATCH1	98	74.871	ENSMGAG00000005775	GPATCH1	83	75.515	Meleagris_gallopavo
ENSCPBG00000000666	GPATCH1	92	60.437	ENSMICG00000004829	GPATCH1	83	57.937	Microcebus_murinus
ENSCPBG00000000666	GPATCH1	92	67.707	ENSMOCG00000000174	Gpatch1	79	67.707	Microtus_ochrogaster
ENSCPBG00000000666	GPATCH1	94	50.512	ENSMMOG00000002140	gpatch1	84	50.590	Mola_mola
ENSCPBG00000000666	GPATCH1	92	68.126	ENSMODG00000012226	GPATCH1	78	67.715	Monodelphis_domestica
ENSCPBG00000000666	GPATCH1	92	55.079	ENSMALG00000014386	gpatch1	79	54.545	Monopterus_albus
ENSCPBG00000000666	GPATCH1	92	67.804	ENSMUSG00000063808	Gpatch1	70	89.855	Mus_musculus
ENSCPBG00000000666	GPATCH1	92	68.076	MGP_PahariEiJ_G0012816	Gpatch1	70	89.855	Mus_pahari
ENSCPBG00000000666	GPATCH1	92	67.667	MGP_SPRETEiJ_G0030681	Gpatch1	70	89.855	Mus_spretus
ENSCPBG00000000666	GPATCH1	92	70.178	ENSMPUG00000007658	GPATCH1	78	70.178	Mustela_putorius_furo
ENSCPBG00000000666	GPATCH1	92	69.631	ENSMLUG00000012161	GPATCH1	79	69.631	Myotis_lucifugus
ENSCPBG00000000666	GPATCH1	92	68.044	ENSNGAG00000012455	Gpatch1	79	68.044	Nannospalax_galili
ENSCPBG00000000666	GPATCH1	92	68.852	ENSNLEG00000007659	GPATCH1	78	68.852	Nomascus_leucogenys
ENSCPBG00000000666	GPATCH1	81	67.656	ENSMEUG00000015174	GPATCH1	69	67.496	Notamacropus_eugenii
ENSCPBG00000000666	GPATCH1	92	65.479	ENSODEG00000007103	GPATCH1	78	66.027	Octodon_degus
ENSCPBG00000000666	GPATCH1	94	53.760	ENSONIG00000003302	gpatch1	80	55.182	Oreochromis_niloticus
ENSCPBG00000000666	GPATCH1	92	74.727	ENSOANG00000012732	GPATCH1	79	74.590	Ornithorhynchus_anatinus
ENSCPBG00000000666	GPATCH1	92	69.904	ENSOCUG00000015905	GPATCH1	78	69.904	Oryctolagus_cuniculus
ENSCPBG00000000666	GPATCH1	92	52.503	ENSORLG00000018706	gpatch1	77	53.100	Oryzias_latipes
ENSCPBG00000000666	GPATCH1	92	51.330	ENSOMEG00000022688	gpatch1	79	51.596	Oryzias_melastigma
ENSCPBG00000000666	GPATCH1	92	69.262	ENSOGAG00000004016	GPATCH1	92	69.262	Otolemur_garnettii
ENSCPBG00000000666	GPATCH1	92	69.904	ENSOARG00000004365	GPATCH1	86	63.069	Ovis_aries
ENSCPBG00000000666	GPATCH1	97	67.141	ENSPPAG00000020990	GPATCH1	83	68.305	Pan_paniscus
ENSCPBG00000000666	GPATCH1	92	68.399	ENSPPRG00000017245	GPATCH1	78	68.399	Panthera_pardus
ENSCPBG00000000666	GPATCH1	92	69.494	ENSPTIG00000019649	GPATCH1	78	69.494	Panthera_tigris_altaica
ENSCPBG00000000666	GPATCH1	97	67.141	ENSPTRG00000010803	GPATCH1	83	65.285	Pan_troglodytes
ENSCPBG00000000666	GPATCH1	97	67.617	ENSPANG00000012374	GPATCH1	82	69.357	Papio_anubis
ENSCPBG00000000666	GPATCH1	92	55.628	ENSPKIG00000020745	gpatch1	75	56.159	Paramormyrops_kingsleyae
ENSCPBG00000000666	GPATCH1	98	85.714	ENSPSIG00000013433	GPATCH1	83	86.118	Pelodiscus_sinensis
ENSCPBG00000000666	GPATCH1	92	68.392	ENSPEMG00000000636	Gpatch1	79	68.392	Peromyscus_maniculatus_bairdii
ENSCPBG00000000666	GPATCH1	92	69.863	ENSPCIG00000021003	GPATCH1	89	68.041	Phascolarctos_cinereus
ENSCPBG00000000666	GPATCH1	91	47.042	ENSPREG00000008264	gpatch1	83	47.330	Poecilia_reticulata
ENSCPBG00000000666	GPATCH1	92	66.259	ENSPPYG00000009824	GPATCH1	78	66.259	Pongo_abelii
ENSCPBG00000000666	GPATCH1	77	79.295	ENSPCAG00000005931	GPATCH1	70	78.992	Procavia_capensis
ENSCPBG00000000666	GPATCH1	92	66.940	ENSPCOG00000009674	GPATCH1	84	66.940	Propithecus_coquereli
ENSCPBG00000000666	GPATCH1	90	66.024	ENSPVAG00000017767	GPATCH1	73	67.894	Pteropus_vampyrus
ENSCPBG00000000666	GPATCH1	91	56.170	ENSPNYG00000018189	gpatch1	86	55.013	Pundamilia_nyererei
ENSCPBG00000000666	GPATCH1	92	56.410	ENSPNAG00000013187	gpatch1	79	56.113	Pygocentrus_nattereri
ENSCPBG00000000666	GPATCH1	92	67.667	ENSRNOG00000011584	Gpatch1	78	68.665	Rattus_norvegicus
ENSCPBG00000000666	GPATCH1	95	62.319	ENSRBIG00000034723	GPATCH1	85	64.011	Rhinopithecus_bieti
ENSCPBG00000000666	GPATCH1	97	67.658	ENSRROG00000024428	GPATCH1	78	69.536	Rhinopithecus_roxellana
ENSCPBG00000000666	GPATCH1	97	67.400	ENSSBOG00000034650	GPATCH1	78	69.262	Saimiri_boliviensis_boliviensis
ENSCPBG00000000666	GPATCH1	92	69.220	ENSSHAG00000016016	GPATCH1	78	68.947	Sarcophilus_harrisii
ENSCPBG00000000666	GPATCH1	92	56.458	ENSSFOG00015011535	gpatch1	77	56.452	Scleropages_formosus
ENSCPBG00000000666	GPATCH1	91	54.864	ENSSMAG00000002883	gpatch1	82	52.187	Scophthalmus_maximus
ENSCPBG00000000666	GPATCH1	92	53.178	ENSSDUG00000007444	gpatch1	77	53.876	Seriola_dumerili
ENSCPBG00000000666	GPATCH1	92	53.719	ENSSLDG00000002856	gpatch1	86	53.677	Seriola_lalandi_dorsalis
ENSCPBG00000000666	GPATCH1	86	71.451	ENSSARG00000004108	GPATCH1	69	71.451	Sorex_araneus
ENSCPBG00000000666	GPATCH1	92	69.631	ENSSSCG00000002865	GPATCH1	81	69.631	Sus_scrofa
ENSCPBG00000000666	GPATCH1	97	76.104	ENSTGUG00000009401	GPATCH1	84	76.104	Taeniopygia_guttata
ENSCPBG00000000666	GPATCH1	92	52.531	ENSTRUG00000025081	gpatch1	78	52.459	Takifugu_rubripes
ENSCPBG00000000666	GPATCH1	92	52.531	ENSTRUG00000005785	-	78	52.459	Takifugu_rubripes
ENSCPBG00000000666	GPATCH1	92	52.432	ENSTNIG00000002554	gpatch1	93	53.235	Tetraodon_nigroviridis
ENSCPBG00000000666	GPATCH1	54	84.615	ENSTBEG00000007750	-	61	84.444	Tupaia_belangeri
ENSCPBG00000000666	GPATCH1	92	61.444	ENSTTRG00000012221	GPATCH1	78	61.737	Tursiops_truncatus
ENSCPBG00000000666	GPATCH1	99	65.596	ENSUMAG00000014645	GPATCH1	92	69.318	Ursus_maritimus
ENSCPBG00000000666	GPATCH1	78	82.192	ENSVPAG00000010313	GPATCH1	72	81.935	Vicugna_pacos
ENSCPBG00000000666	GPATCH1	92	70.725	ENSVVUG00000016572	GPATCH1	78	70.725	Vulpes_vulpes
ENSCPBG00000000666	GPATCH1	88	60.115	ENSXETG00000018276	gpatch1	93	57.831	Xenopus_tropicalis