EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000000733 (Gene tree)
Gene ID: 101951432
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 234545 bases
Position: chrKK082940.1:2730391-2964935
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000000894	KH_1	PF00013.29	8.6e-55	1	3
ENSCPBP00000000894	KH_1	PF00013.29	8.6e-55	2	3
ENSCPBP00000000894	KH_1	PF00013.29	8.6e-55	3	3
ENSCPBP00000000907	KH_1	PF00013.29	8.6e-55	1	3
ENSCPBP00000000907	KH_1	PF00013.29	8.6e-55	2	3
ENSCPBP00000000907	KH_1	PF00013.29	8.6e-55	3	3
ENSCPBP00000000925	KH_1	PF00013.29	9e-55	1	3
ENSCPBP00000000925	KH_1	PF00013.29	9e-55	2	3
ENSCPBP00000000925	KH_1	PF00013.29	9e-55	3	3
ENSCPBP00000000943	KH_1	PF00013.29	4.6e-52	1	3
ENSCPBP00000000943	KH_1	PF00013.29	4.6e-52	2	3
ENSCPBP00000000943	KH_1	PF00013.29	4.6e-52	3	3
ENSCPBP00000000894	KH_2	PF07650.17	3.4e-16	1	1
ENSCPBP00000000907	KH_2	PF07650.17	3.4e-16	1	1
ENSCPBP00000000925	KH_2	PF07650.17	3.6e-16	1	1
ENSCPBP00000000943	KH_2	PF07650.17	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000001135	-	1914	-	ENSCPBP00000000907	451 (aa)	XP_005296553	UPI0003890CF8
ENSCPBT00000001119	-	1611	-	ENSCPBP00000000894	451 (aa)	XP_005296553	UPI0003890CF8
ENSCPBT00000001176	-	1543	-	ENSCPBP00000000943	394 (aa)	-	-
ENSCPBT00000001158	-	1729	-	ENSCPBP00000000925	456 (aa)	XP_005296552	UPI000388C98C

Gene Model

Click here to download ENSCPBG00000000733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000000733's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000000733	-	66	41.667	ENSCPBG00000021776	HNRNPK	58	46.667
ENSCPBG00000000733	-	66	34.307	ENSCPBG00000022464	IGF2BP3	65	34.307
ENSCPBG00000000733	-	72	42.188	ENSCPBG00000027677	NOVA1	57	43.333
ENSCPBG00000000733	-	69	93.750	ENSCPBG00000012151	-	97	80.342
ENSCPBG00000000733	-	100	58.993	ENSCPBG00000016554	PCBP4	97	57.554
ENSCPBG00000000733	-	71	33.803	ENSCPBG00000022635	FUBP3	64	33.803
ENSCPBG00000000733	-	99	68.820	ENSCPBG00000001467	PCBP2	97	76.435
ENSCPBG00000000733	-	67	36.765	ENSCPBG00000007370	IGF2BP2	61	36.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000000733	-	73	80.000	ENSAPOG00000020003	pcbp3	85	80.000	Acanthochromis_polyacanthus
ENSCPBG00000000733	-	76	80.925	ENSAPOG00000016582	-	99	80.925	Acanthochromis_polyacanthus
ENSCPBG00000000733	-	69	91.327	ENSAMEG00000001697	-	97	92.268	Ailuropoda_melanoleuca
ENSCPBG00000000733	-	76	80.347	ENSACIG00000010933	pcbp3	98	82.938	Amphilophus_citrinellus
ENSCPBG00000000733	-	73	81.873	ENSACIG00000002739	-	96	81.873	Amphilophus_citrinellus
ENSCPBG00000000733	-	73	82.622	ENSAOCG00000008592	-	96	82.622	Amphiprion_ocellaris
ENSCPBG00000000733	-	72	78.457	ENSAOCG00000007806	-	98	78.457	Amphiprion_ocellaris
ENSCPBG00000000733	-	73	81.873	ENSAPEG00000005209	-	96	81.873	Amphiprion_percula
ENSCPBG00000000733	-	72	87.204	ENSAPEG00000008011	pcbp3	98	87.204	Amphiprion_percula
ENSCPBG00000000733	-	73	81.269	ENSATEG00000009833	-	96	81.269	Anabas_testudineus
ENSCPBG00000000733	-	72	84.308	ENSATEG00000015787	-	98	84.308	Anabas_testudineus
ENSCPBG00000000733	-	100	99.543	ENSAPLG00000008951	-	100	85.300	Anas_platyrhynchos
ENSCPBG00000000733	-	73	81.739	ENSAPLG00000002975	-	97	81.739	Anas_platyrhynchos
ENSCPBG00000000733	-	74	97.904	ENSACAG00000009819	-	97	98.174	Anolis_carolinensis
ENSCPBG00000000733	-	69	89.302	ENSACAG00000004607	-	97	89.302	Anolis_carolinensis
ENSCPBG00000000733	-	71	81.673	ENSANAG00000030702	-	96	85.926	Aotus_nancymaae
ENSCPBG00000000733	-	72	86.730	ENSACLG00000011835	pcbp3	98	86.730	Astatotilapia_calliptera
ENSCPBG00000000733	-	76	80.347	ENSACLG00000003801	-	99	80.347	Astatotilapia_calliptera
ENSCPBG00000000733	-	72	88.152	ENSAMXG00000003440	pcbp3	98	88.152	Astyanax_mexicanus
ENSCPBG00000000733	-	73	80.183	ENSAMXG00000013588	-	99	80.183	Astyanax_mexicanus
ENSCPBG00000000733	-	100	68.037	ENSAMXG00000001760	zgc:110045	100	64.076	Astyanax_mexicanus
ENSCPBG00000000733	-	66	93.229	ENSCAFG00020019472	-	83	83.203	Canis_lupus_dingo
ENSCPBG00000000733	-	73	84.290	ENSCSAG00000007440	-	88	84.290	Chlorocebus_sabaeus
ENSCPBG00000000733	-	72	80.308	ENSCSEG00000000822	pcbp3	96	80.308	Cynoglossus_semilaevis
ENSCPBG00000000733	-	65	89.840	ENSCSEG00000016984	-	95	74.583	Cynoglossus_semilaevis
ENSCPBG00000000733	-	77	78.977	ENSCVAG00000005262	-	97	82.583	Cyprinodon_variegatus
ENSCPBG00000000733	-	72	87.204	ENSCVAG00000014482	pcbp3	98	87.204	Cyprinodon_variegatus
ENSCPBG00000000733	-	59	68.545	ENSDARG00000110961	zgc:110045	100	66.197	Danio_rerio
ENSCPBG00000000733	-	86	88.208	ENSDARG00000054378	pcbp3	98	88.626	Danio_rerio
ENSCPBG00000000733	-	73	72.508	ENSETEG00000015988	-	97	72.508	Echinops_telfairi
ENSCPBG00000000733	-	71	68.493	ENSEBUG00000016192	pcbp3	99	68.621	Eptatretus_burgeri
ENSCPBG00000000733	-	65	75.000	ENSEBUG00000005495	pcbp3	73	64.419	Eptatretus_burgeri
ENSCPBG00000000733	-	98	66.741	ENSEBUG00000007485	-	92	74.793	Eptatretus_burgeri
ENSCPBG00000000733	-	75	81.232	ENSELUG00000001560	-	94	87.113	Esox_lucius
ENSCPBG00000000733	-	72	88.095	ENSELUG00000003521	pcbp3	97	88.095	Esox_lucius
ENSCPBG00000000733	-	100	97.717	ENSFALG00000004411	-	100	93.501	Ficedula_albicollis
ENSCPBG00000000733	-	73	85.455	ENSFALG00000003949	-	97	85.455	Ficedula_albicollis
ENSCPBG00000000733	-	75	78.466	ENSFHEG00000016615	pcbp3	97	78.466	Fundulus_heteroclitus
ENSCPBG00000000733	-	74	79.525	ENSFHEG00000006539	-	97	80.480	Fundulus_heteroclitus
ENSCPBG00000000733	-	73	69.944	ENSGMOG00000011992	pcbp3	95	71.143	Gadus_morhua
ENSCPBG00000000733	-	74	59.437	ENSGMOG00000008611	-	98	61.272	Gadus_morhua
ENSCPBG00000000733	-	69	86.047	ENSGALG00000004394	-	97	86.047	Gallus_gallus
ENSCPBG00000000733	-	74	98.795	ENSGALG00000013155	-	98	96.933	Gallus_gallus
ENSCPBG00000000733	-	73	82.012	ENSGAFG00000011430	pcbp3	94	82.012	Gambusia_affinis
ENSCPBG00000000733	-	77	79.261	ENSGAFG00000010274	-	99	80.172	Gambusia_affinis
ENSCPBG00000000733	-	68	80.097	ENSGACG00000014955	-	95	80.097	Gasterosteus_aculeatus
ENSCPBG00000000733	-	73	78.797	ENSGACG00000002266	-	95	78.797	Gasterosteus_aculeatus
ENSCPBG00000000733	-	95	99.724	ENSGAGG00000000271	-	100	100.000	Gopherus_agassizii
ENSCPBG00000000733	-	66	80.275	ENSGAGG00000006956	-	94	75.630	Gopherus_agassizii
ENSCPBG00000000733	-	72	86.730	ENSHBUG00000010697	pcbp3	98	86.730	Haplochromis_burtoni
ENSCPBG00000000733	-	76	80.347	ENSHBUG00000021782	-	99	80.347	Haplochromis_burtoni
ENSCPBG00000000733	-	72	80.368	ENSHCOG00000006067	-	95	80.368	Hippocampus_comes
ENSCPBG00000000733	-	72	87.204	ENSHCOG00000017868	pcbp3	98	87.204	Hippocampus_comes
ENSCPBG00000000733	-	72	88.073	ENSIPUG00000006238	pcbp3	95	88.626	Ictalurus_punctatus
ENSCPBG00000000733	-	63	60.476	ENSIPUG00000003914	zgc:110045	100	61.321	Ictalurus_punctatus
ENSCPBG00000000733	-	75	80.588	ENSKMAG00000018530	-	97	80.588	Kryptolebias_marmoratus
ENSCPBG00000000733	-	72	87.204	ENSKMAG00000003046	pcbp3	98	87.204	Kryptolebias_marmoratus
ENSCPBG00000000733	-	73	79.154	ENSLBEG00000006201	pcbp3	93	80.122	Labrus_bergylta
ENSCPBG00000000733	-	76	67.826	ENSLBEG00000006542	-	99	68.986	Labrus_bergylta
ENSCPBG00000000733	-	99	89.302	ENSLACG00000010386	pcbp3	79	89.302	Latimeria_chalumnae
ENSCPBG00000000733	-	100	97.717	ENSLACG00000010804	zgc:110045	100	97.717	Latimeria_chalumnae
ENSCPBG00000000733	-	73	88.218	ENSLOCG00000009369	pcbp3	97	88.837	Lepisosteus_oculatus
ENSCPBG00000000733	-	100	97.260	ENSLOCG00000005058	zgc:110045	100	91.772	Lepisosteus_oculatus
ENSCPBG00000000733	-	73	81.571	ENSMAMG00000011620	-	96	81.571	Mastacembelus_armatus
ENSCPBG00000000733	-	74	79.042	ENSMAMG00000022336	pcbp3	94	79.042	Mastacembelus_armatus
ENSCPBG00000000733	-	69	86.885	ENSMZEG00005014882	-	89	86.885	Maylandia_zebra
ENSCPBG00000000733	-	76	80.347	ENSMZEG00005008993	pcbp3	98	82.938	Maylandia_zebra
ENSCPBG00000000733	-	70	87.234	ENSMGAG00000001883	-	97	87.234	Meleagris_gallopavo
ENSCPBG00000000733	-	100	98.174	ENSMGAG00000006794	-	100	93.501	Meleagris_gallopavo
ENSCPBG00000000733	-	73	80.665	ENSMMOG00000005216	-	96	80.665	Mola_mola
ENSCPBG00000000733	-	73	79.635	ENSMMOG00000000730	pcbp3	86	79.635	Mola_mola
ENSCPBG00000000733	-	53	78.140	ENSMODG00000027884	-	94	83.750	Monodelphis_domestica
ENSCPBG00000000733	-	76	80.347	ENSMALG00000000691	pcbp3	98	83.412	Monopterus_albus
ENSCPBG00000000733	-	99	65.957	ENSMPUG00000001779	-	89	73.714	Mustela_putorius_furo
ENSCPBG00000000733	-	75	81.525	ENSNBRG00000016409	-	98	82.938	Neolamprologus_brichardi
ENSCPBG00000000733	-	73	85.000	ENSNBRG00000016714	-	99	85.000	Neolamprologus_brichardi
ENSCPBG00000000733	-	69	85.581	ENSOPRG00000003431	-	99	85.581	Ochotona_princeps
ENSCPBG00000000733	-	70	86.730	ENSONIG00000012122	-	98	86.730	Oreochromis_niloticus
ENSCPBG00000000733	-	69	89.000	ENSONIG00000004611	-	96	89.000	Oreochromis_niloticus
ENSCPBG00000000733	-	73	84.545	ENSOCUG00000002696	-	88	84.545	Oryctolagus_cuniculus
ENSCPBG00000000733	-	77	80.516	ENSORLG00000022739	-	97	83.183	Oryzias_latipes
ENSCPBG00000000733	-	72	83.077	ENSORLG00000000059	pcbp3	97	83.077	Oryzias_latipes
ENSCPBG00000000733	-	77	80.229	ENSORLG00020006124	-	97	82.883	Oryzias_latipes_hni
ENSCPBG00000000733	-	72	83.077	ENSORLG00020012671	pcbp3	95	83.077	Oryzias_latipes_hni
ENSCPBG00000000733	-	77	80.516	ENSORLG00015008051	-	99	80.516	Oryzias_latipes_hsok
ENSCPBG00000000733	-	72	83.077	ENSORLG00015000429	pcbp3	95	83.077	Oryzias_latipes_hsok
ENSCPBG00000000733	-	70	80.858	ENSOMEG00000020811	pcbp3	97	80.858	Oryzias_melastigma
ENSCPBG00000000733	-	74	82.196	ENSOMEG00000020162	-	97	83.183	Oryzias_melastigma
ENSCPBG00000000733	-	69	89.216	ENSOGAG00000008044	-	97	89.216	Otolemur_garnettii
ENSCPBG00000000733	-	68	84.000	ENSPKIG00000020913	-	97	84.000	Paramormyrops_kingsleyae
ENSCPBG00000000733	-	76	81.159	ENSPKIG00000019329	pcbp3	98	81.525	Paramormyrops_kingsleyae
ENSCPBG00000000733	-	73	72.701	ENSPSIG00000014970	-	97	73.276	Pelodiscus_sinensis
ENSCPBG00000000733	-	95	100.000	ENSPSIG00000008350	-	100	100.000	Pelodiscus_sinensis
ENSCPBG00000000733	-	72	87.204	ENSPMGG00000022383	pcbp3	98	87.204	Periophthalmus_magnuspinnatus
ENSCPBG00000000733	-	73	69.461	ENSPMAG00000004551	pcbp3	89	69.461	Petromyzon_marinus
ENSCPBG00000000733	-	66	91.667	ENSPMAG00000004637	-	99	91.667	Petromyzon_marinus
ENSCPBG00000000733	-	92	89.302	ENSPCIG00000028092	-	97	88.520	Phascolarctos_cinereus
ENSCPBG00000000733	-	72	78.466	ENSPLAG00000004074	-	89	78.466	Poecilia_latipinna
ENSCPBG00000000733	-	74	77.183	ENSPLAG00000011449	pcbp3	89	80.282	Poecilia_latipinna
ENSCPBG00000000733	-	72	85.981	ENSPMEG00000021239	pcbp3	98	85.981	Poecilia_mexicana
ENSCPBG00000000733	-	68	87.831	ENSPMEG00000006653	-	95	86.224	Poecilia_mexicana
ENSCPBG00000000733	-	73	78.182	ENSPREG00000015736	pcbp3	98	78.182	Poecilia_reticulata
ENSCPBG00000000733	-	66	91.192	ENSPREG00000020585	-	87	91.192	Poecilia_reticulata
ENSCPBG00000000733	-	73	79.635	ENSPNYG00000012326	pcbp3	94	79.635	Pundamilia_nyererei
ENSCPBG00000000733	-	73	80.665	ENSPNYG00000013205	-	96	80.665	Pundamilia_nyererei
ENSCPBG00000000733	-	72	83.792	ENSPNAG00000015104	pcbp3	95	83.792	Pygocentrus_nattereri
ENSCPBG00000000733	-	73	87.500	ENSPNAG00000008541	-	99	83.237	Pygocentrus_nattereri
ENSCPBG00000000733	-	62	67.136	ENSPNAG00000006838	zgc:110045	100	66.197	Pygocentrus_nattereri
ENSCPBG00000000733	-	73	84.290	ENSRNOG00000001245	Pcbp3	97	84.290	Rattus_norvegicus
ENSCPBG00000000733	-	89	74.890	ENSRBIG00000028177	-	97	74.890	Rhinopithecus_bieti
ENSCPBG00000000733	-	66	91.000	ENSSHAG00000007890	-	94	91.000	Sarcophilus_harrisii
ENSCPBG00000000733	-	73	85.976	ENSSFOG00015010205	pcbp3	98	86.420	Scleropages_formosus
ENSCPBG00000000733	-	72	87.678	ENSSFOG00015014706	pcbp3	98	87.678	Scleropages_formosus
ENSCPBG00000000733	-	74	83.434	ENSSFOG00015007118	-	95	83.434	Scleropages_formosus
ENSCPBG00000000733	-	76	79.769	ENSSMAG00000003135	-	98	80.702	Scophthalmus_maximus
ENSCPBG00000000733	-	72	80.615	ENSSMAG00000011929	pcbp3	95	80.615	Scophthalmus_maximus
ENSCPBG00000000733	-	72	84.049	ENSSDUG00000011608	pcbp3	96	84.049	Seriola_dumerili
ENSCPBG00000000733	-	76	78.551	ENSSDUG00000008502	-	99	78.551	Seriola_dumerili
ENSCPBG00000000733	-	72	84.049	ENSSLDG00000008518	pcbp3	96	84.049	Seriola_lalandi_dorsalis
ENSCPBG00000000733	-	76	80.925	ENSSLDG00000020161	-	99	80.925	Seriola_lalandi_dorsalis
ENSCPBG00000000733	-	100	96.629	ENSSPUG00000013214	-	100	93.446	Sphenodon_punctatus
ENSCPBG00000000733	-	76	69.653	ENSSPAG00000023341	-	98	70.468	Stegastes_partitus
ENSCPBG00000000733	-	71	79.344	ENSSPAG00000004190	-	97	79.344	Stegastes_partitus
ENSCPBG00000000733	-	69	88.525	ENSTGUG00000003316	-	97	77.208	Taeniopygia_guttata
ENSCPBG00000000733	-	73	91.239	ENSTGUG00000008158	-	97	91.239	Taeniopygia_guttata
ENSCPBG00000000733	-	71	82.392	ENSTRUG00000006280	-	89	82.392	Takifugu_rubripes
ENSCPBG00000000733	-	65	92.188	ENSTRUG00000013604	pcbp3	98	80.409	Takifugu_rubripes
ENSCPBG00000000733	-	69	90.686	ENSTTRG00000015075	-	97	88.372	Tursiops_truncatus
ENSCPBG00000000733	-	96	98.985	ENSXETG00000010491	pcbp2	100	98.985	Xenopus_tropicalis
ENSCPBG00000000733	-	69	94.271	ENSXETG00000011483	pcbp1	97	94.271	Xenopus_tropicalis
ENSCPBG00000000733	-	72	85.981	ENSXCOG00000020481	pcbp3	98	85.981	Xiphophorus_couchianus
ENSCPBG00000000733	-	77	79.545	ENSXMAG00000028711	-	99	80.460	Xiphophorus_maculatus
ENSCPBG00000000733	-	72	87.204	ENSXMAG00000008175	pcbp3	98	87.204	Xiphophorus_maculatus