EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000000748 (Gene tree)
Gene ID: 101942486
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 3427 bases
Position: chrKK082979.1:3263855-3267281
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000000957	GTP_EFTU	PF00009.27	2.1e-54	1	1
ENSCPBP00000000957	GTP_EFTU_D2	PF03144.25	5.4e-13	1	1
ENSCPBP00000000957	GTP_EFTU_D3	PF03143.17	8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000001193	-	1386	-	ENSCPBP00000000957	461 (aa)	XP_005302149	UPI000388FD5F

Gene Model

Click here to download ENSCPBG00000000748's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000000748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000000748	-	99	90.870	ENSCPBG00000005222	-	99	90.870
ENSCPBG00000000748	-	96	37.698	ENSCPBG00000020430	GSPT1	77	37.783
ENSCPBG00000000748	-	100	96.095	ENSCPBG00000000646	-	100	96.095
ENSCPBG00000000748	-	99	90.435	ENSCPBG00000027203	EEF1A2	99	90.435
ENSCPBG00000000748	-	95	38.688	ENSCPBG00000017635	HBS1L	62	38.688
ENSCPBG00000000748	-	99	69.011	ENSCPBG00000020570	-	89	69.011

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000000748	-	67	86.319	ENSAPOG00000004757	eef1a1l1	99	100.000	Acanthochromis_polyacanthus
ENSCPBG00000000748	-	100	79.826	ENSAMEG00000004317	-	100	79.826	Ailuropoda_melanoleuca
ENSCPBG00000000748	-	100	86.768	ENSAMEG00000009677	-	100	86.768	Ailuropoda_melanoleuca
ENSCPBG00000000748	-	100	87.419	ENSCAFG00000013249	-	100	87.419	Canis_familiaris
ENSCPBG00000000748	-	100	87.419	ENSCAFG00020020007	-	100	87.419	Canis_lupus_dingo
ENSCPBG00000000748	-	99	91.304	ENSDARG00000020850	eef1a1l1	99	91.304	Danio_rerio
ENSCPBG00000000748	-	85	84.264	ENSEASG00005018013	-	99	84.264	Equus_asinus_asinus
ENSCPBG00000000748	-	98	88.987	ENSEASG00005012365	-	96	90.047	Equus_asinus_asinus
ENSCPBG00000000748	-	100	87.202	ENSECAG00000022260	-	100	87.202	Equus_caballus
ENSCPBG00000000748	-	100	90.456	ENSELUG00000023536	eef1a1l1	100	90.456	Esox_lucius
ENSCPBG00000000748	-	100	89.371	ENSFCAG00000030530	-	100	89.371	Felis_catus
ENSCPBG00000000748	-	100	95.445	ENSGAGG00000000648	-	100	95.445	Gopherus_agassizii
ENSCPBG00000000748	-	100	98.698	ENSGAGG00000000642	-	100	98.698	Gopherus_agassizii
ENSCPBG00000000748	-	90	87.409	ENSLBEG00000002790	eef1a1l1	99	87.409	Labrus_bergylta
ENSCPBG00000000748	-	100	89.371	ENSLAFG00000028081	-	99	89.371	Loxodonta_africana
ENSCPBG00000000748	-	100	90.022	ENSLAFG00000025161	-	100	90.022	Loxodonta_africana
ENSCPBG00000000748	-	75	92.775	ENSOANG00000012066	-	100	92.775	Ornithorhynchus_anatinus
ENSCPBG00000000748	-	90	88.620	ENSOMEG00000006888	-	99	88.620	Oryzias_melastigma
ENSCPBG00000000748	-	100	89.805	ENSOARG00000002943	-	100	89.805	Ovis_aries
ENSCPBG00000000748	-	97	89.888	ENSPPRG00000005678	-	95	89.888	Panthera_pardus
ENSCPBG00000000748	-	100	86.117	ENSPPRG00000008525	-	100	86.117	Panthera_pardus
ENSCPBG00000000748	-	100	88.286	ENSPTIG00000006939	-	100	88.286	Panthera_tigris_altaica
ENSCPBG00000000748	-	100	95.011	ENSPSIG00000008610	-	100	95.011	Pelodiscus_sinensis
ENSCPBG00000000748	-	66	98.148	ENSPVAG00000007682	-	65	98.148	Pteropus_vampyrus
ENSCPBG00000000748	-	100	81.345	ENSSMAG00000018455	-	99	81.345	Scophthalmus_maximus
ENSCPBG00000000748	-	100	94.360	ENSSPUG00000003655	-	100	94.360	Sphenodon_punctatus
ENSCPBG00000000748	-	98	84.735	ENSSSCG00000038035	-	100	84.382	Sus_scrofa
ENSCPBG00000000748	-	100	91.106	ENSSSCG00000034113	-	100	91.106	Sus_scrofa
ENSCPBG00000000748	-	100	85.033	ENSUAMG00000008928	-	100	85.033	Ursus_americanus
ENSCPBG00000000748	-	100	77.007	ENSUAMG00000007676	-	100	77.007	Ursus_americanus
ENSCPBG00000000748	-	51	81.702	ENSUAMG00000006085	-	98	81.702	Ursus_americanus
ENSCPBG00000000748	-	100	86.768	ENSUMAG00000013211	-	100	86.768	Ursus_maritimus
ENSCPBG00000000748	-	100	87.202	ENSVVUG00000026886	-	100	87.202	Vulpes_vulpes
ENSCPBG00000000748	-	100	89.805	ENSXETG00000022604	eef1a1o	100	89.805	Xenopus_tropicalis