EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000001258 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 7269 bases
Position: chrKK083577.1:101912-109180
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000001574	zf-C2H2	PF00096.26	2e-35	1	6
ENSCPBP00000001574	zf-C2H2	PF00096.26	2e-35	2	6
ENSCPBP00000001574	zf-C2H2	PF00096.26	2e-35	3	6
ENSCPBP00000001574	zf-C2H2	PF00096.26	2e-35	4	6
ENSCPBP00000001574	zf-C2H2	PF00096.26	2e-35	5	6
ENSCPBP00000001574	zf-C2H2	PF00096.26	2e-35	6	6
ENSCPBP00000001574	zf-met	PF12874.7	9.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000001936	-	555	-	ENSCPBP00000001574	184 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000001258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000001258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000001258	-	95	44.118	ENSCPBG00000026947	ZNF319	92	44.118
ENSCPBG00000001258	-	91	54.487	ENSCPBG00000002014	-	56	54.487
ENSCPBG00000001258	-	98	68.132	ENSCPBG00000004030	-	92	68.132
ENSCPBG00000001258	-	99	69.182	ENSCPBG00000001181	-	99	69.182
ENSCPBG00000001258	-	98	65.663	ENSCPBG00000003774	-	88	65.663
ENSCPBG00000001258	-	98	61.765	ENSCPBG00000001272	-	71	60.000
ENSCPBG00000001258	-	91	46.154	ENSCPBG00000009849	-	82	46.154
ENSCPBG00000001258	-	98	60.000	ENSCPBG00000004990	-	100	54.857
ENSCPBG00000001258	-	93	61.714	ENSCPBG00000009609	-	81	63.253
ENSCPBG00000001258	-	99	66.286	ENSCPBG00000003130	-	96	66.286
ENSCPBG00000001258	-	99	64.205	ENSCPBG00000016841	-	98	65.741
ENSCPBG00000001258	-	99	67.213	ENSCPBG00000012976	-	93	69.048
ENSCPBG00000001258	-	98	59.639	ENSCPBG00000001421	-	99	61.765
ENSCPBG00000001258	-	99	67.816	ENSCPBG00000002430	-	76	65.537
ENSCPBG00000001258	-	95	64.103	ENSCPBG00000026433	-	53	64.103
ENSCPBG00000001258	-	98	64.035	ENSCPBG00000017489	-	94	64.035
ENSCPBG00000001258	-	90	56.410	ENSCPBG00000015987	-	62	56.410
ENSCPBG00000001258	-	99	59.281	ENSCPBG00000015500	-	90	63.793
ENSCPBG00000001258	-	93	46.784	ENSCPBG00000008580	-	74	46.784
ENSCPBG00000001258	-	98	62.805	ENSCPBG00000017494	-	84	63.068
ENSCPBG00000001258	-	91	49.112	ENSCPBG00000001526	-	80	50.407
ENSCPBG00000001258	-	93	68.333	ENSCPBG00000021479	-	83	68.333
ENSCPBG00000001258	-	99	49.444	ENSCPBG00000005586	-	67	49.444
ENSCPBG00000001258	-	97	58.011	ENSCPBG00000005703	-	52	58.011
ENSCPBG00000001258	-	99	54.872	ENSCPBG00000021487	-	69	54.872
ENSCPBG00000001258	-	99	55.357	ENSCPBG00000002063	-	58	55.357

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000001258	-	95	45.882	ENSACIG00000011153	-	69	48.936	Amphilophus_citrinellus
ENSCPBG00000001258	-	91	50.407	ENSACIG00000019791	-	92	50.407	Amphilophus_citrinellus
ENSCPBG00000001258	-	99	55.294	ENSANAG00000032414	-	87	55.294	Aotus_nancymaae
ENSCPBG00000001258	-	96	40.719	ENSACLG00000017329	-	81	40.719	Astatotilapia_calliptera
ENSCPBG00000001258	-	99	41.880	ENSACLG00000022499	-	81	41.880	Astatotilapia_calliptera
ENSCPBG00000001258	-	93	44.000	ENSACLG00000001507	-	78	44.000	Astatotilapia_calliptera
ENSCPBG00000001258	-	91	41.477	ENSACLG00000014167	-	56	40.571	Astatotilapia_calliptera
ENSCPBG00000001258	-	91	47.009	ENSACLG00000020474	-	83	47.009	Astatotilapia_calliptera
ENSCPBG00000001258	-	98	57.317	ENSAMXG00000031501	-	89	57.317	Astyanax_mexicanus
ENSCPBG00000001258	-	98	53.548	ENSAMXG00000039162	-	94	53.548	Astyanax_mexicanus
ENSCPBG00000001258	-	98	52.941	ENSAMXG00000036849	-	92	52.941	Astyanax_mexicanus
ENSCPBG00000001258	-	99	48.333	ENSAMXG00000031844	-	92	48.333	Astyanax_mexicanus
ENSCPBG00000001258	-	98	52.903	ENSAMXG00000031646	-	94	52.903	Astyanax_mexicanus
ENSCPBG00000001258	-	99	52.778	ENSAMXG00000038324	-	82	52.778	Astyanax_mexicanus
ENSCPBG00000001258	-	98	52.991	ENSAMXG00000039770	-	84	52.991	Astyanax_mexicanus
ENSCPBG00000001258	-	98	53.889	ENSAMXG00000010078	-	92	53.889	Astyanax_mexicanus
ENSCPBG00000001258	-	99	44.379	ENSCHIG00000015741	-	90	44.379	Capra_hircus
ENSCPBG00000001258	-	99	52.973	ENSCCAG00000035188	-	86	52.973	Cebus_capucinus
ENSCPBG00000001258	-	90	48.571	ENSDNOG00000048084	-	97	48.571	Dasypus_novemcinctus
ENSCPBG00000001258	-	97	50.289	ENSETEG00000002865	-	85	50.289	Echinops_telfairi
ENSCPBG00000001258	-	93	50.303	ENSEBUG00000012748	-	68	50.556	Eptatretus_burgeri
ENSCPBG00000001258	-	96	49.419	ENSEBUG00000011582	-	72	50.435	Eptatretus_burgeri
ENSCPBG00000001258	-	94	52.469	ENSEBUG00000008157	-	99	52.469	Eptatretus_burgeri
ENSCPBG00000001258	-	96	51.429	ENSEBUG00000011479	-	75	51.429	Eptatretus_burgeri
ENSCPBG00000001258	-	95	53.425	ENSECAG00000035557	-	71	52.475	Equus_caballus
ENSCPBG00000001258	-	92	42.012	ENSFHEG00000016184	-	74	42.012	Fundulus_heteroclitus
ENSCPBG00000001258	-	97	46.023	ENSGMOG00000004315	-	99	46.023	Gadus_morhua
ENSCPBG00000001258	-	90	44.186	ENSGACG00000019863	-	98	44.186	Gasterosteus_aculeatus
ENSCPBG00000001258	-	96	69.945	ENSGAGG00000007230	-	82	69.565	Gopherus_agassizii
ENSCPBG00000001258	-	97	68.047	ENSGAGG00000013851	-	76	68.047	Gopherus_agassizii
ENSCPBG00000001258	-	99	48.235	ENSHBUG00000019800	-	91	51.304	Haplochromis_burtoni
ENSCPBG00000001258	-	99	50.394	ENSHBUG00000017372	-	87	50.000	Haplochromis_burtoni
ENSCPBG00000001258	-	91	50.568	ENSHBUG00000000146	-	78	50.847	Haplochromis_burtoni
ENSCPBG00000001258	-	99	41.011	ENSHBUG00000013264	-	85	41.011	Haplochromis_burtoni
ENSCPBG00000001258	-	96	38.994	ENSHBUG00000006238	-	92	38.994	Haplochromis_burtoni
ENSCPBG00000001258	-	91	45.161	ENSHBUG00000021028	-	82	45.161	Haplochromis_burtoni
ENSCPBG00000001258	-	91	50.000	ENSHGLG00000018394	-	92	50.000	Heterocephalus_glaber_female
ENSCPBG00000001258	-	98	56.522	ENSIPUG00000009750	-	78	56.522	Ictalurus_punctatus
ENSCPBG00000001258	-	98	58.268	ENSIPUG00000021527	-	94	58.268	Ictalurus_punctatus
ENSCPBG00000001258	-	93	53.254	ENSIPUG00000015233	-	56	58.261	Ictalurus_punctatus
ENSCPBG00000001258	-	90	52.174	ENSIPUG00000003960	-	84	52.174	Ictalurus_punctatus
ENSCPBG00000001258	-	90	53.333	ENSIPUG00000021484	-	98	53.333	Ictalurus_punctatus
ENSCPBG00000001258	-	99	55.000	ENSIPUG00000022751	-	97	57.265	Ictalurus_punctatus
ENSCPBG00000001258	-	97	53.892	ENSIPUG00000001941	-	83	53.892	Ictalurus_punctatus
ENSCPBG00000001258	-	93	53.254	ENSIPUG00000021472	-	69	53.750	Ictalurus_punctatus
ENSCPBG00000001258	-	98	54.375	ENSIPUG00000021518	-	87	54.762	Ictalurus_punctatus
ENSCPBG00000001258	-	95	53.409	ENSIPUG00000013065	-	92	53.409	Ictalurus_punctatus
ENSCPBG00000001258	-	98	48.571	ENSIPUG00000011073	-	99	48.571	Ictalurus_punctatus
ENSCPBG00000001258	-	98	46.629	ENSIPUG00000021434	-	94	46.629	Ictalurus_punctatus
ENSCPBG00000001258	-	94	52.601	ENSIPUG00000006936	-	83	51.064	Ictalurus_punctatus
ENSCPBG00000001258	-	97	55.882	ENSSTOG00000034297	-	68	55.882	Ictidomys_tridecemlineatus
ENSCPBG00000001258	-	99	56.571	ENSMFAG00000046052	-	86	56.571	Macaca_fascicularis
ENSCPBG00000001258	-	99	57.143	ENSMNEG00000041636	-	86	57.143	Macaca_nemestrina
ENSCPBG00000001258	-	99	56.571	ENSMLEG00000032640	-	86	56.571	Mandrillus_leucophaeus
ENSCPBG00000001258	-	99	45.143	ENSMAMG00000009051	-	90	43.624	Mastacembelus_armatus
ENSCPBG00000001258	-	99	38.251	ENSMZEG00005027950	-	91	38.251	Maylandia_zebra
ENSCPBG00000001258	-	99	39.884	ENSMZEG00005012737	-	80	39.884	Maylandia_zebra
ENSCPBG00000001258	-	99	38.650	ENSMZEG00005019982	-	95	38.650	Maylandia_zebra
ENSCPBG00000001258	-	90	44.000	ENSMZEG00005021421	-	94	44.000	Maylandia_zebra
ENSCPBG00000001258	-	99	45.763	ENSMZEG00005027285	-	82	45.714	Maylandia_zebra
ENSCPBG00000001258	-	99	39.884	ENSMZEG00005020736	-	87	39.884	Maylandia_zebra
ENSCPBG00000001258	-	98	47.712	ENSMALG00000004413	-	93	47.712	Monopterus_albus
ENSCPBG00000001258	-	91	51.695	ENSNBRG00000015652	-	82	51.695	Neolamprologus_brichardi
ENSCPBG00000001258	-	91	46.597	ENSNBRG00000013604	-	69	48.322	Neolamprologus_brichardi
ENSCPBG00000001258	-	93	41.026	ENSNBRG00000016582	-	85	41.026	Neolamprologus_brichardi
ENSCPBG00000001258	-	95	52.632	ENSNBRG00000015873	-	94	52.632	Neolamprologus_brichardi
ENSCPBG00000001258	-	97	40.571	ENSNBRG00000016603	-	90	40.571	Neolamprologus_brichardi
ENSCPBG00000001258	-	91	43.529	ENSONIG00000020516	-	97	43.114	Oreochromis_niloticus
ENSCPBG00000001258	-	99	42.775	ENSONIG00000008953	-	92	42.073	Oreochromis_niloticus
ENSCPBG00000001258	-	99	40.136	ENSONIG00000007931	-	90	40.136	Oreochromis_niloticus
ENSCPBG00000001258	-	90	41.420	ENSONIG00000021124	-	99	41.420	Oreochromis_niloticus
ENSCPBG00000001258	-	99	42.593	ENSONIG00000001834	-	99	42.593	Oreochromis_niloticus
ENSCPBG00000001258	-	99	46.087	ENSONIG00000000122	-	99	40.588	Oreochromis_niloticus
ENSCPBG00000001258	-	99	45.556	ENSONIG00000015166	-	100	45.556	Oreochromis_niloticus
ENSCPBG00000001258	-	97	46.591	ENSORLG00015012951	-	82	46.591	Oryzias_latipes_hsok
ENSCPBG00000001258	-	99	57.059	ENSOGAG00000025289	-	83	57.059	Otolemur_garnettii
ENSCPBG00000001258	-	99	56.571	ENSPANG00000030978	-	91	56.571	Papio_anubis
ENSCPBG00000001258	-	99	49.171	ENSPEMG00000016975	Zfp940	76	49.171	Peromyscus_maniculatus_bairdii
ENSCPBG00000001258	-	98	47.826	ENSPMEG00000004595	-	95	46.269	Poecilia_mexicana
ENSCPBG00000001258	-	93	58.523	ENSPPYG00000009906	-	71	58.523	Pongo_abelii
ENSCPBG00000001258	-	94	40.000	ENSPNYG00000024244	-	85	40.000	Pundamilia_nyererei
ENSCPBG00000001258	-	98	56.322	ENSPNAG00000019338	-	92	59.140	Pygocentrus_nattereri
ENSCPBG00000001258	-	98	52.459	ENSPNAG00000011625	-	81	54.598	Pygocentrus_nattereri
ENSCPBG00000001258	-	99	56.250	ENSSBOG00000029728	-	86	56.250	Saimiri_boliviensis_boliviensis
ENSCPBG00000001258	-	96	59.444	ENSSPUG00000010059	-	79	59.429	Sphenodon_punctatus