EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000001356 (Gene tree)
Gene ID: 101945648
Gene Symbol: ZMAT1
Alias: KIAA1789
Full Name: zinc finger matrin-type 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 35813 bases
Position: chrKK082947.1:5655193-5691005
Accession: 29377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000001676	zf-met	PF12874.7	3.5e-27	1	4
ENSCPBP00000001676	zf-met	PF12874.7	3.5e-27	2	4
ENSCPBP00000001676	zf-met	PF12874.7	3.5e-27	3	4
ENSCPBP00000001676	zf-met	PF12874.7	3.5e-27	4	4
ENSCPBP00000001667	zf-met	PF12874.7	4.1e-27	1	4
ENSCPBP00000001667	zf-met	PF12874.7	4.1e-27	2	4
ENSCPBP00000001667	zf-met	PF12874.7	4.1e-27	3	4
ENSCPBP00000001667	zf-met	PF12874.7	4.1e-27	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000002074	ZMAT1-202	1733	-	ENSCPBP00000001676	572 (aa)	-	-
ENSCPBT00000002064	ZMAT1-201	1790	-	ENSCPBP00000001667	591 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000001356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000001356's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000001356	ZMAT1	54	39.735	ENSCPBG00000022601	ZNF346	83	45.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000001356	ZMAT1	93	40.755	ENSG00000166432	ZMAT1	86	41.132	Homo_sapiens
ENSCPBG00000001356	ZMAT1	91	56.589	ENSAMEG00000004976	ZMAT1	99	49.060	Ailuropoda_melanoleuca
ENSCPBG00000001356	ZMAT1	92	42.045	ENSANAG00000028725	ZMAT1	100	41.667	Aotus_nancymaae
ENSCPBG00000001356	ZMAT1	97	51.444	ENSBTAG00000003601	ZMAT1	91	58.491	Bos_taurus
ENSCPBG00000001356	ZMAT1	90	53.279	ENSCJAG00000019724	ZMAT1	90	39.773	Callithrix_jacchus
ENSCPBG00000001356	ZMAT1	91	59.690	ENSCAFG00000017730	ZMAT1	91	59.690	Canis_familiaris
ENSCPBG00000001356	ZMAT1	52	65.517	ENSCAFG00020007319	ZMAT1	89	71.233	Canis_lupus_dingo
ENSCPBG00000001356	ZMAT1	52	65.385	ENSCHIG00000010507	ZMAT1	77	86.111	Capra_hircus
ENSCPBG00000001356	ZMAT1	92	34.733	ENSTSYG00000007330	ZMAT1	90	40.230	Carlito_syrichta
ENSCPBG00000001356	ZMAT1	90	37.864	ENSCPOG00000000581	ZMAT1	92	37.908	Cavia_porcellus
ENSCPBG00000001356	ZMAT1	92	40.909	ENSCCAG00000023924	ZMAT1	91	40.909	Cebus_capucinus
ENSCPBG00000001356	ZMAT1	88	81.579	ENSCATG00000000551	ZMAT1	88	40.377	Cercocebus_atys
ENSCPBG00000001356	ZMAT1	86	75.000	ENSCLAG00000004197	ZMAT1	96	78.788	Chinchilla_lanigera
ENSCPBG00000001356	ZMAT1	97	43.452	ENSCSAG00000009795	ZMAT1	88	41.132	Chlorocebus_sabaeus
ENSCPBG00000001356	ZMAT1	91	54.839	ENSCANG00000037194	ZMAT1	90	55.738	Colobus_angolensis_palliatus
ENSCPBG00000001356	ZMAT1	96	36.313	ENSCGRG00001023697	Zmat1	92	35.094	Cricetulus_griseus_chok1gshd
ENSCPBG00000001356	ZMAT1	92	32.961	ENSCGRG00000001964	Zmat1	91	35.094	Cricetulus_griseus_crigri
ENSCPBG00000001356	ZMAT1	54	47.799	ENSDARG00000058679	zgc:114104	75	48.515	Danio_rerio
ENSCPBG00000001356	ZMAT1	78	35.249	ENSDNOG00000044924	-	99	34.866	Dasypus_novemcinctus
ENSCPBG00000001356	ZMAT1	78	68.085	ENSDNOG00000014852	-	80	90.323	Dasypus_novemcinctus
ENSCPBG00000001356	ZMAT1	96	35.714	ENSDORG00000006821	Zmat1	92	37.358	Dipodomys_ordii
ENSCPBG00000001356	ZMAT1	80	46.667	ENSETEG00000020259	ZMAT1	93	40.310	Echinops_telfairi
ENSCPBG00000001356	ZMAT1	91	37.297	ENSEASG00005014185	ZMAT1	93	41.509	Equus_asinus_asinus
ENSCPBG00000001356	ZMAT1	99	49.457	ENSECAG00000013390	ZMAT1	99	41.887	Equus_caballus
ENSCPBG00000001356	ZMAT1	91	51.966	ENSFCAG00000023394	ZMAT1	99	51.966	Felis_catus
ENSCPBG00000001356	ZMAT1	94	37.690	ENSFDAG00000004063	ZMAT1	88	36.873	Fukomys_damarensis
ENSCPBG00000001356	ZMAT1	89	40.400	ENSGALG00000046009	-	99	40.200	Gallus_gallus
ENSCPBG00000001356	ZMAT1	96	95.636	ENSGAGG00000002326	ZMAT1	100	95.636	Gopherus_agassizii
ENSCPBG00000001356	ZMAT1	92	40.755	ENSGGOG00000025784	ZMAT1	87	41.132	Gorilla_gorilla
ENSCPBG00000001356	ZMAT1	96	39.329	ENSHGLG00000002494	ZMAT1	91	39.264	Heterocephalus_glaber_female
ENSCPBG00000001356	ZMAT1	96	37.430	ENSHGLG00100004968	ZMAT1	92	37.360	Heterocephalus_glaber_male
ENSCPBG00000001356	ZMAT1	88	41.509	ENSSTOG00000011140	ZMAT1	100	41.509	Ictidomys_tridecemlineatus
ENSCPBG00000001356	ZMAT1	96	47.826	ENSJJAG00000020188	Zmat1	90	34.118	Jaculus_jaculus
ENSCPBG00000001356	ZMAT1	86	76.923	ENSLAFG00000015656	ZMAT1	92	84.848	Loxodonta_africana
ENSCPBG00000001356	ZMAT1	81	56.452	ENSMFAG00000042343	ZMAT1	68	54.688	Macaca_fascicularis
ENSCPBG00000001356	ZMAT1	91	56.452	ENSMMUG00000002151	ZMAT1	92	41.132	Macaca_mulatta
ENSCPBG00000001356	ZMAT1	97	42.857	ENSMNEG00000036310	ZMAT1	85	48.837	Macaca_nemestrina
ENSCPBG00000001356	ZMAT1	91	57.258	ENSMLEG00000005031	ZMAT1	72	58.197	Mandrillus_leucophaeus
ENSCPBG00000001356	ZMAT1	50	48.136	ENSMGAG00000013165	-	99	50.000	Meleagris_gallopavo
ENSCPBG00000001356	ZMAT1	96	36.813	ENSMAUG00000002941	Zmat1	92	36.226	Mesocricetus_auratus
ENSCPBG00000001356	ZMAT1	91	54.615	ENSMICG00000003313	ZMAT1	91	54.615	Microcebus_murinus
ENSCPBG00000001356	ZMAT1	96	72.727	ENSMOCG00000000169	Zmat1	82	74.194	Microtus_ochrogaster
ENSCPBG00000001356	ZMAT1	96	37.546	ENSMUSG00000052676	Zmat1	92	36.194	Mus_musculus
ENSCPBG00000001356	ZMAT1	96	30.575	MGP_PahariEiJ_G0031943	Zmat1	100	35.849	Mus_pahari
ENSCPBG00000001356	ZMAT1	96	35.985	MGP_SPRETEiJ_G0034567	Zmat1	90	36.680	Mus_spretus
ENSCPBG00000001356	ZMAT1	91	57.962	ENSMPUG00000002130	ZMAT1	79	59.732	Mustela_putorius_furo
ENSCPBG00000001356	ZMAT1	65	55.000	ENSMLUG00000004417	ZMAT1	90	66.667	Myotis_lucifugus
ENSCPBG00000001356	ZMAT1	96	56.863	ENSNGAG00000006608	Zmat1	86	58.333	Nannospalax_galili
ENSCPBG00000001356	ZMAT1	93	50.735	ENSNLEG00000030520	ZMAT1	87	39.117	Nomascus_leucogenys
ENSCPBG00000001356	ZMAT1	77	52.991	ENSOCUG00000004164	ZMAT1	91	54.839	Oryctolagus_cuniculus
ENSCPBG00000001356	ZMAT1	92	40.138	ENSOGAG00000033601	ZMAT1	99	39.446	Otolemur_garnettii
ENSCPBG00000001356	ZMAT1	91	58.170	ENSOARG00000001897	ZMAT1	83	86.111	Ovis_aries
ENSCPBG00000001356	ZMAT1	89	47.586	ENSPPAG00000039554	ZMAT1	87	41.132	Pan_paniscus
ENSCPBG00000001356	ZMAT1	92	38.754	ENSPPRG00000005258	ZMAT1	99	41.603	Panthera_pardus
ENSCPBG00000001356	ZMAT1	92	38.408	ENSPTIG00000019057	ZMAT1	99	39.446	Panthera_tigris_altaica
ENSCPBG00000001356	ZMAT1	97	41.887	ENSPTRG00000041840	ZMAT1	87	41.132	Pan_troglodytes
ENSCPBG00000001356	ZMAT1	96	36.538	ENSPEMG00000009944	Zmat1	96	34.551	Peromyscus_maniculatus_bairdii
ENSCPBG00000001356	ZMAT1	92	40.755	ENSPPYG00000020561	ZMAT1	94	54.412	Pongo_abelii
ENSCPBG00000001356	ZMAT1	93	54.412	ENSPCAG00000010283	ZMAT1	82	72.222	Procavia_capensis
ENSCPBG00000001356	ZMAT1	90	40.625	ENSPCOG00000021386	ZMAT1	90	40.625	Propithecus_coquereli
ENSCPBG00000001356	ZMAT1	91	39.118	ENSPVAG00000013206	ZMAT1	91	40.996	Pteropus_vampyrus
ENSCPBG00000001356	ZMAT1	96	50.000	ENSRNOG00000024135	Zmat1	85	61.905	Rattus_norvegicus
ENSCPBG00000001356	ZMAT1	89	56.034	ENSRBIG00000034121	ZMAT1	85	55.085	Rhinopithecus_bieti
ENSCPBG00000001356	ZMAT1	92	52.555	ENSRROG00000036747	ZMAT1	87	52.555	Rhinopithecus_roxellana
ENSCPBG00000001356	ZMAT1	92	47.260	ENSSBOG00000029970	ZMAT1	91	50.000	Saimiri_boliviensis_boliviensis
ENSCPBG00000001356	ZMAT1	88	53.953	ENSSHAG00000011087	-	100	54.545	Sarcophilus_harrisii
ENSCPBG00000001356	ZMAT1	100	66.216	ENSSPUG00000004951	ZMAT1	100	66.723	Sphenodon_punctatus
ENSCPBG00000001356	ZMAT1	75	51.420	ENSSSCG00000012512	ZMAT1	90	68.056	Sus_scrofa
ENSCPBG00000001356	ZMAT1	92	34.712	ENSTRUG00000014880	zgc:114104	93	35.072	Takifugu_rubripes
ENSCPBG00000001356	ZMAT1	76	53.191	ENSTBEG00000012967	ZMAT1	93	53.191	Tupaia_belangeri
ENSCPBG00000001356	ZMAT1	92	45.178	ENSTTRG00000016662	ZMAT1	91	41.479	Tursiops_truncatus
ENSCPBG00000001356	ZMAT1	52	64.368	ENSUAMG00000015209	ZMAT1	70	71.831	Ursus_americanus
ENSCPBG00000001356	ZMAT1	52	64.368	ENSUMAG00000000627	ZMAT1	70	71.831	Ursus_maritimus
ENSCPBG00000001356	ZMAT1	92	39.623	ENSVPAG00000006267	ZMAT1	99	40.755	Vicugna_pacos
ENSCPBG00000001356	ZMAT1	97	46.939	ENSVVUG00000005342	ZMAT1	83	44.660	Vulpes_vulpes
ENSCPBG00000001356	ZMAT1	53	58.117	ENSXETG00000001949	krcc1	96	46.168	Xenopus_tropicalis