EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000001421 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 7612 bases
Position: chrKK083312.1:431929-439540
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	1	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	2	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	3	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	4	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	5	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	6	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	7	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	8	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	9	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	10	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	11	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	12	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	13	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	14	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	15	16
ENSCPBP00000001880	zf-C2H2	PF00096.26	2e-110	16	16
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	1	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	2	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	3	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	4	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	5	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	6	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	7	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	8	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	9	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	10	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	11	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	12	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	13	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	14	15
ENSCPBP00000001825	zf-C2H2	PF00096.26	1.1e-104	15	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	1	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	2	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	3	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	4	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	5	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	6	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	7	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	8	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	9	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	10	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	11	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	12	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	13	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	14	15
ENSCPBP00000001867	zf-C2H2	PF00096.26	1.3e-98	15	15
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	1	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	2	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	3	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	4	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	5	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	6	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	7	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	8	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	9	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	10	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	11	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	12	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	13	14
ENSCPBP00000001842	zf-C2H2	PF00096.26	1.4e-93	14	14
ENSCPBP00000001894	zf-C2H2	PF00096.26	2.7e-78	1	11
ENSCPBP00000001894	zf-C2H2	PF00096.26	2.7e-78	2	11
ENSCPBP00000001894	zf-C2H2	PF00096.26	2.7e-78	3	11
ENSCPBP00000001894	zf-C2H2	PF00096.26	2.7e-78	4	11
ENSCPBP00000001894	zf-C2H2	PF00096.26	2.7e-78	5	11
ENSCPBP00000001894	zf-C2H2	PF00096.26	2.7e-78	6	11
ENSCPBP00000001894	zf-C2H2	PF00096.26	2.7e-78	7	11
ENSCPBP00000001894	zf-C2H2	PF00096.26	2.7e-78	8	11
ENSCPBP00000001894	zf-C2H2	PF00096.26	2.7e-78	9	11
ENSCPBP00000001894	zf-C2H2	PF00096.26	2.7e-78	10	11
ENSCPBP00000001894	zf-C2H2	PF00096.26	2.7e-78	11	11
ENSCPBP00000001805	zf-C2H2	PF00096.26	1.1e-74	1	10
ENSCPBP00000001805	zf-C2H2	PF00096.26	1.1e-74	2	10
ENSCPBP00000001805	zf-C2H2	PF00096.26	1.1e-74	3	10
ENSCPBP00000001805	zf-C2H2	PF00096.26	1.1e-74	4	10
ENSCPBP00000001805	zf-C2H2	PF00096.26	1.1e-74	5	10
ENSCPBP00000001805	zf-C2H2	PF00096.26	1.1e-74	6	10
ENSCPBP00000001805	zf-C2H2	PF00096.26	1.1e-74	7	10
ENSCPBP00000001805	zf-C2H2	PF00096.26	1.1e-74	8	10
ENSCPBP00000001805	zf-C2H2	PF00096.26	1.1e-74	9	10
ENSCPBP00000001805	zf-C2H2	PF00096.26	1.1e-74	10	10
ENSCPBP00000001825	zf-met	PF12874.7	1.7e-19	1	2
ENSCPBP00000001825	zf-met	PF12874.7	1.7e-19	2	2
ENSCPBP00000001880	zf-met	PF12874.7	2.1e-19	1	1
ENSCPBP00000001894	zf-met	PF12874.7	2.4e-15	1	1
ENSCPBP00000001842	zf-met	PF12874.7	1.9e-14	1	2
ENSCPBP00000001842	zf-met	PF12874.7	1.9e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000002315	-	1611	-	ENSCPBP00000001880	536 (aa)	-	-
ENSCPBT00000002265	-	1479	-	ENSCPBP00000001842	492 (aa)	-	-
ENSCPBT00000002243	-	1431	-	ENSCPBP00000001825	476 (aa)	-	-
ENSCPBT00000002300	-	1779	-	ENSCPBP00000001867	592 (aa)	-	-
ENSCPBT00000002222	-	1380	-	ENSCPBP00000001805	459 (aa)	-	-
ENSCPBT00000002332	-	1098	-	ENSCPBP00000001894	365 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000001421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000001421's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000001421	-	99	61.765	ENSCPBG00000001258	-	98	59.639
ENSCPBG00000001421	-	99	42.180	ENSCPBG00000024735	PRDM5	77	41.463
ENSCPBG00000001421	-	98	52.020	ENSCPBG00000009849	-	91	53.631
ENSCPBG00000001421	-	100	35.493	ENSCPBG00000004542	ZNF865	86	41.026
ENSCPBG00000001421	-	98	57.736	ENSCPBG00000009609	-	96	54.762
ENSCPBG00000001421	-	93	79.032	ENSCPBG00000004990	-	100	69.549
ENSCPBG00000001421	-	99	66.952	ENSCPBG00000004030	-	90	63.529
ENSCPBG00000001421	-	98	57.216	ENSCPBG00000002063	-	61	60.606
ENSCPBG00000001421	-	98	62.893	ENSCPBG00000026433	-	95	62.937
ENSCPBG00000001421	-	94	68.217	ENSCPBG00000016841	-	98	68.217
ENSCPBG00000001421	-	100	67.119	ENSCPBG00000001181	-	99	66.133
ENSCPBG00000001421	-	99	62.963	ENSCPBG00000021479	-	94	61.566
ENSCPBG00000001421	-	98	65.969	ENSCPBG00000017489	-	99	65.385
ENSCPBG00000001421	-	98	73.464	ENSCPBG00000015500	-	97	73.392
ENSCPBG00000001421	-	98	42.177	ENSCPBG00000013652	-	77	44.257
ENSCPBG00000001421	-	99	45.385	ENSCPBG00000008580	-	91	50.000
ENSCPBG00000001421	-	100	67.358	ENSCPBG00000003774	-	99	66.860
ENSCPBG00000001421	-	99	57.078	ENSCPBG00000002014	-	66	55.405
ENSCPBG00000001421	-	99	45.178	ENSCPBG00000023418	-	65	45.178
ENSCPBG00000001421	-	98	69.853	ENSCPBG00000017494	-	99	66.959
ENSCPBG00000001421	-	100	63.178	ENSCPBG00000012976	-	95	62.843
ENSCPBG00000001421	-	100	71.028	ENSCPBG00000003130	-	98	68.919
ENSCPBG00000001421	-	98	62.632	ENSCPBG00000021487	-	95	61.053
ENSCPBG00000001421	-	100	62.835	ENSCPBG00000002430	-	99	61.484
ENSCPBG00000001421	-	98	65.809	ENSCPBG00000005703	-	54	65.580
ENSCPBG00000001421	-	96	38.663	ENSCPBG00000026947	ZNF319	93	42.651
ENSCPBG00000001421	-	98	51.917	ENSCPBG00000005586	-	68	54.519
ENSCPBG00000001421	-	94	58.088	ENSCPBG00000015987	-	92	51.579
ENSCPBG00000001421	-	98	66.568	ENSCPBG00000001272	-	99	66.374
ENSCPBG00000001421	-	98	48.495	ENSCPBG00000001526	-	93	47.531
ENSCPBG00000001421	-	99	46.369	ENSCPBG00000005715	ZBTB49	65	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000001421	-	96	62.903	ENSAMXG00000029161	-	85	62.903	Astyanax_mexicanus
ENSCPBG00000001421	-	100	64.878	ENSGAGG00000009272	-	98	64.113	Gopherus_agassizii
ENSCPBG00000001421	-	98	60.084	ENSGAGG00000014356	-	84	59.385	Gopherus_agassizii
ENSCPBG00000001421	-	94	75.529	ENSGAGG00000002214	-	90	81.471	Gopherus_agassizii
ENSCPBG00000001421	-	99	88.435	ENSGAGG00000002179	-	91	88.435	Gopherus_agassizii
ENSCPBG00000001421	-	99	61.538	ENSGAGG00000012452	-	92	63.636	Gopherus_agassizii
ENSCPBG00000001421	-	98	61.468	ENSGAGG00000001645	-	76	63.063	Gopherus_agassizii
ENSCPBG00000001421	-	98	65.625	ENSGAGG00000016529	-	99	57.692	Gopherus_agassizii
ENSCPBG00000001421	-	98	59.245	ENSGAGG00000018445	-	100	58.300	Gopherus_agassizii
ENSCPBG00000001421	-	98	65.057	ENSGAGG00000020134	-	89	58.019	Gopherus_agassizii
ENSCPBG00000001421	-	100	66.899	ENSGAGG00000010324	-	91	64.679	Gopherus_agassizii
ENSCPBG00000001421	-	100	62.126	ENSGAGG00000011487	-	99	62.215	Gopherus_agassizii
ENSCPBG00000001421	-	99	64.672	ENSGAGG00000010833	-	99	60.497	Gopherus_agassizii
ENSCPBG00000001421	-	96	60.622	ENSPSIG00000000522	-	100	56.650	Pelodiscus_sinensis
ENSCPBG00000001421	-	97	64.419	ENSPSIG00000002569	-	90	66.418	Pelodiscus_sinensis
ENSCPBG00000001421	-	98	59.624	ENSPSIG00000015465	-	90	59.707	Pelodiscus_sinensis
ENSCPBG00000001421	-	100	65.000	ENSPSIG00000009893	-	87	65.000	Pelodiscus_sinensis
ENSCPBG00000001421	-	94	71.920	ENSPSIG00000012865	-	70	71.920	Pelodiscus_sinensis
ENSCPBG00000001421	-	99	58.908	ENSPSIG00000001026	-	92	65.248	Pelodiscus_sinensis
ENSCPBG00000001421	-	99	60.241	ENSPSIG00000015216	-	95	59.055	Pelodiscus_sinensis
ENSCPBG00000001421	-	99	60.697	ENSTGUG00000013736	-	99	63.021	Taeniopygia_guttata
ENSCPBG00000001421	-	99	60.163	ENSTGUG00000018518	-	100	61.905	Taeniopygia_guttata
ENSCPBG00000001421	-	99	62.069	ENSTGUG00000018349	-	100	64.815	Taeniopygia_guttata
ENSCPBG00000001421	-	99	57.565	ENSTGUG00000016781	-	99	59.274	Taeniopygia_guttata
ENSCPBG00000001421	-	99	58.605	ENSTGUG00000014888	-	99	61.026	Taeniopygia_guttata
ENSCPBG00000001421	-	99	58.000	ENSTGUG00000014614	-	98	60.000	Taeniopygia_guttata
ENSCPBG00000001421	-	99	57.895	ENSTGUG00000016850	-	99	59.766	Taeniopygia_guttata
ENSCPBG00000001421	-	99	60.000	ENSTGUG00000018327	-	100	64.667	Taeniopygia_guttata
ENSCPBG00000001421	-	98	61.905	ENSTGUG00000018542	-	100	66.667	Taeniopygia_guttata
ENSCPBG00000001421	-	97	58.268	ENSTGUG00000018374	-	99	60.510	Taeniopygia_guttata
ENSCPBG00000001421	-	99	62.201	ENSTGUG00000016516	-	99	62.903	Taeniopygia_guttata
ENSCPBG00000001421	-	99	58.503	ENSTGUG00000018445	-	99	61.856	Taeniopygia_guttata
ENSCPBG00000001421	-	99	58.095	ENSTGUG00000015260	-	100	58.730	Taeniopygia_guttata