EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000001510 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 62920 bases
Position: chrKK083583.1:31207-94126
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000002232	ResIII	PF04851.15	1e-12	1	1
ENSCPBP00000002278	ResIII	PF04851.15	1.4e-12	1	1
ENSCPBP00000002265	ResIII	PF04851.15	1.5e-12	1	1
ENSCPBP00000002278	DEAD	PF00270.29	8.4e-19	1	1
ENSCPBP00000002232	DEAD	PF00270.29	8.7e-19	1	1
ENSCPBP00000002265	DEAD	PF00270.29	8.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000002724	-	4761	-	ENSCPBP00000002232	1586 (aa)	-	-
ENSCPBT00000002783	-	4509	-	ENSCPBP00000002278	1502 (aa)	-	-
ENSCPBT00000002765	-	4647	-	ENSCPBP00000002265	1548 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000001510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000001510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000001510	-	97	70.416	ENSCPBG00000027534	DDX60	86	70.416

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000001510	-	99	61.237	ENSG00000137628	DDX60	99	61.165	Homo_sapiens
ENSCPBG00000001510	-	99	69.484	ENSAMEG00000013429	DDX60	92	69.484	Ailuropoda_melanoleuca
ENSCPBG00000001510	-	82	70.833	ENSAPLG00000007120	DDX60	95	67.773	Anas_platyrhynchos
ENSCPBG00000001510	-	99	65.090	ENSACAG00000016010	DDX60	95	57.168	Anolis_carolinensis
ENSCPBG00000001510	-	99	60.206	ENSANAG00000030883	DDX60	99	57.468	Aotus_nancymaae
ENSCPBG00000001510	-	99	60.619	ENSCJAG00000004726	DDX60	99	57.376	Callithrix_jacchus
ENSCPBG00000001510	-	99	69.953	ENSCAFG00000009003	DDX60	93	67.355	Canis_familiaris
ENSCPBG00000001510	-	63	54.646	ENSTSYG00000011545	-	98	54.949	Carlito_syrichta
ENSCPBG00000001510	-	95	67.742	ENSCAPG00000006504	DDX60	93	67.312	Cavia_aperea
ENSCPBG00000001510	-	95	67.473	ENSCPOG00000008326	DDX60	90	63.596	Cavia_porcellus
ENSCPBG00000001510	-	99	60.206	ENSCCAG00000034674	DDX60	96	59.665	Cebus_capucinus
ENSCPBG00000001510	-	99	61.443	ENSCATG00000038859	DDX60	96	61.553	Cercocebus_atys
ENSCPBG00000001510	-	99	64.257	ENSCLAG00000015332	DDX60	93	64.257	Chinchilla_lanigera
ENSCPBG00000001510	-	99	63.911	ENSCSAG00000003155	DDX60	93	63.911	Chlorocebus_sabaeus
ENSCPBG00000001510	-	99	61.183	ENSCANG00000032267	DDX60	96	61.183	Colobus_angolensis_palliatus
ENSCPBG00000001510	-	99	65.485	ENSCGRG00001018201	Ddx60	95	60.920	Cricetulus_griseus_chok1gshd
ENSCPBG00000001510	-	99	65.485	ENSCGRG00000005295	Ddx60	95	60.920	Cricetulus_griseus_crigri
ENSCPBG00000001510	-	99	60.668	ENSDNOG00000008454	DDX60	96	60.668	Dasypus_novemcinctus
ENSCPBG00000001510	-	99	67.136	ENSEASG00005021849	DDX60	92	67.056	Equus_asinus_asinus
ENSCPBG00000001510	-	95	68.000	ENSECAG00000024167	DDX60	85	68.000	Equus_caballus
ENSCPBG00000001510	-	93	75.000	ENSECAG00000032492	-	86	75.000	Equus_caballus
ENSCPBG00000001510	-	91	61.082	ENSEEUG00000010236	DDX60	84	61.082	Erinaceus_europaeus
ENSCPBG00000001510	-	99	65.443	ENSFCAG00000010766	DDX60	95	62.734	Felis_catus
ENSCPBG00000001510	-	99	74.424	ENSGALG00000009639	DDX60	87	73.125	Gallus_gallus
ENSCPBG00000001510	-	93	63.975	ENSGGOG00000012801	DDX60	98	64.174	Gorilla_gorilla
ENSCPBG00000001510	-	77	68.692	ENSHGLG00000013790	DDX60	94	61.538	Heterocephalus_glaber_female
ENSCPBG00000001510	-	77	68.692	ENSHGLG00100002763	-	94	61.538	Heterocephalus_glaber_male
ENSCPBG00000001510	-	85	63.676	ENSSTOG00000016257	DDX60	99	61.524	Ictidomys_tridecemlineatus
ENSCPBG00000001510	-	70	63.265	ENSLACG00000017399	DDX60	99	57.039	Latimeria_chalumnae
ENSCPBG00000001510	-	99	61.443	ENSMFAG00000016136	DDX60	96	61.338	Macaca_fascicularis
ENSCPBG00000001510	-	99	61.553	ENSMMUG00000001880	DDX60	96	61.338	Macaca_mulatta
ENSCPBG00000001510	-	99	55.126	ENSMNEG00000030573	DDX60	96	55.126	Macaca_nemestrina
ENSCPBG00000001510	-	99	61.553	ENSMLEG00000030919	DDX60	97	61.338	Mandrillus_leucophaeus
ENSCPBG00000001510	-	99	72.500	ENSMGAG00000002432	DDX60	92	72.500	Meleagris_gallopavo
ENSCPBG00000001510	-	99	65.012	ENSMAUG00000016664	Ddx60	92	64.871	Mesocricetus_auratus
ENSCPBG00000001510	-	99	62.391	ENSMICG00000013542	DDX60	96	59.551	Microcebus_murinus
ENSCPBG00000001510	-	99	65.248	ENSMOCG00000008571	-	89	65.248	Microtus_ochrogaster
ENSCPBG00000001510	-	99	64.066	ENSMOCG00000007646	-	95	58.491	Microtus_ochrogaster
ENSCPBG00000001510	-	99	61.048	ENSMODG00000002645	DDX60	92	60.991	Monodelphis_domestica
ENSCPBG00000001510	-	99	63.895	MGP_CAROLIEiJ_G0031080	Ddx60	94	62.818	Mus_caroli
ENSCPBG00000001510	-	99	65.948	ENSMUSG00000037921	Ddx60	92	65.948	Mus_musculus
ENSCPBG00000001510	-	99	69.718	ENSMPUG00000007710	DDX60	93	67.355	Mustela_putorius_furo
ENSCPBG00000001510	-	99	65.021	ENSMLUG00000007300	DDX60	93	65.021	Myotis_lucifugus
ENSCPBG00000001510	-	99	61.237	ENSNLEG00000006542	DDX60	96	61.152	Nomascus_leucogenys
ENSCPBG00000001510	-	90	65.086	ENSOANG00000007454	DDX60	91	64.920	Ornithorhynchus_anatinus
ENSCPBG00000001510	-	67	66.667	ENSOANG00000028702	-	99	55.712	Ornithorhynchus_anatinus
ENSCPBG00000001510	-	99	67.371	ENSOCUG00000006355	DDX60	93	67.371	Oryctolagus_cuniculus
ENSCPBG00000001510	-	98	66.811	ENSOCUG00000020913	-	93	66.811	Oryctolagus_cuniculus
ENSCPBG00000001510	-	66	57.185	ENSOCUG00000022101	-	99	57.185	Oryctolagus_cuniculus
ENSCPBG00000001510	-	71	55.014	ENSPPAG00000040254	-	99	51.345	Pan_paniscus
ENSCPBG00000001510	-	99	65.443	ENSPPRG00000009286	DDX60	95	62.921	Panthera_pardus
ENSCPBG00000001510	-	99	65.443	ENSPTIG00000022042	DDX60	95	62.921	Panthera_tigris_altaica
ENSCPBG00000001510	-	99	61.443	ENSPTRG00000016581	DDX60	96	61.338	Pan_troglodytes
ENSCPBG00000001510	-	99	61.553	ENSPANG00000019535	DDX60	96	61.553	Papio_anubis
ENSCPBG00000001510	-	99	69.725	ENSPSIG00000004307	DDX60	94	66.734	Pelodiscus_sinensis
ENSCPBG00000001510	-	99	63.158	ENSPEMG00000023735	-	93	63.052	Peromyscus_maniculatus_bairdii
ENSCPBG00000001510	-	99	61.031	ENSPPYG00000015184	DDX60	94	60.595	Pongo_abelii
ENSCPBG00000001510	-	73	77.451	ENSPCAG00000002661	-	65	79.775	Procavia_capensis
ENSCPBG00000001510	-	90	52.648	ENSPCAG00000000925	-	89	52.960	Procavia_capensis
ENSCPBG00000001510	-	93	75.694	ENSPCOG00000008412	DDX60	89	76.923	Propithecus_coquereli
ENSCPBG00000001510	-	95	62.645	ENSPVAG00000011428	DDX60	94	58.446	Pteropus_vampyrus
ENSCPBG00000001510	-	78	76.636	ENSRNOG00000059097	AABR07025140.1	87	79.775	Rattus_norvegicus
ENSCPBG00000001510	-	92	61.475	ENSRBIG00000034414	DDX60	98	59.098	Rhinopithecus_bieti
ENSCPBG00000001510	-	99	61.270	ENSRROG00000030767	DDX60	96	61.183	Rhinopithecus_roxellana
ENSCPBG00000001510	-	99	55.224	ENSSBOG00000024856	DDX60	96	55.224	Saimiri_boliviensis_boliviensis
ENSCPBG00000001510	-	99	63.554	ENSSHAG00000016219	DDX60	92	63.499	Sarcophilus_harrisii
ENSCPBG00000001510	-	87	62.972	ENSSARG00000002474	-	86	62.972	Sorex_araneus
ENSCPBG00000001510	-	86	79.482	ENSSPUG00000019257	DDX60	98	80.505	Sphenodon_punctatus
ENSCPBG00000001510	-	96	65.802	ENSSSCG00000009720	DDX60	97	61.006	Sus_scrofa
ENSCPBG00000001510	-	90	61.189	ENSTTRG00000016129	DDX60	87	61.538	Tursiops_truncatus
ENSCPBG00000001510	-	98	69.544	ENSUMAG00000020219	DDX60	94	67.436	Ursus_maritimus
ENSCPBG00000001510	-	99	69.014	ENSVVUG00000023953	DDX60	89	69.014	Vulpes_vulpes
ENSCPBG00000001510	-	99	60.823	ENSXETG00000031597	-	92	60.823	Xenopus_tropicalis