EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000001526 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 4364 bases
Position: chrKK083200.1:651811-656174
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000001878	zf-C2H2	PF00096.26	3.8e-56	1	10
ENSCPBP00000001878	zf-C2H2	PF00096.26	3.8e-56	2	10
ENSCPBP00000001878	zf-C2H2	PF00096.26	3.8e-56	3	10
ENSCPBP00000001878	zf-C2H2	PF00096.26	3.8e-56	4	10
ENSCPBP00000001878	zf-C2H2	PF00096.26	3.8e-56	5	10
ENSCPBP00000001878	zf-C2H2	PF00096.26	3.8e-56	6	10
ENSCPBP00000001878	zf-C2H2	PF00096.26	3.8e-56	7	10
ENSCPBP00000001878	zf-C2H2	PF00096.26	3.8e-56	8	10
ENSCPBP00000001878	zf-C2H2	PF00096.26	3.8e-56	9	10
ENSCPBP00000001878	zf-C2H2	PF00096.26	3.8e-56	10	10
ENSCPBP00000001883	zf-C2H2	PF00096.26	3.8e-56	1	10
ENSCPBP00000001883	zf-C2H2	PF00096.26	3.8e-56	2	10
ENSCPBP00000001883	zf-C2H2	PF00096.26	3.8e-56	3	10
ENSCPBP00000001883	zf-C2H2	PF00096.26	3.8e-56	4	10
ENSCPBP00000001883	zf-C2H2	PF00096.26	3.8e-56	5	10
ENSCPBP00000001883	zf-C2H2	PF00096.26	3.8e-56	6	10
ENSCPBP00000001883	zf-C2H2	PF00096.26	3.8e-56	7	10
ENSCPBP00000001883	zf-C2H2	PF00096.26	3.8e-56	8	10
ENSCPBP00000001883	zf-C2H2	PF00096.26	3.8e-56	9	10
ENSCPBP00000001883	zf-C2H2	PF00096.26	3.8e-56	10	10
ENSCPBP00000001878	zf-met	PF12874.7	6e-10	1	1
ENSCPBP00000001883	zf-met	PF12874.7	6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000002319	-	1795	-	ENSCPBP00000001883	392 (aa)	-	UPI000388E8C4
ENSCPBT00000002313	-	1437	-	ENSCPBP00000001878	392 (aa)	-	UPI000388E8C4

Gene Model

Click here to download ENSCPBG00000001526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000001526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000001526	-	79	53.023	ENSCPBG00000001272	-	78	53.023
ENSCPBG00000001526	-	83	55.251	ENSCPBG00000004990	-	100	52.679
ENSCPBG00000001526	-	87	53.540	ENSCPBG00000015500	-	91	52.655
ENSCPBG00000001526	-	88	52.632	ENSCPBG00000012976	-	95	52.047
ENSCPBG00000001526	-	79	51.485	ENSCPBG00000013652	-	70	45.926
ENSCPBG00000001526	-	90	50.968	ENSCPBG00000002430	-	77	48.936
ENSCPBG00000001526	-	79	49.242	ENSCPBG00000002014	-	51	49.242
ENSCPBG00000001526	-	78	52.604	ENSCPBG00000021479	-	83	52.604
ENSCPBG00000001526	-	79	52.217	ENSCPBG00000005703	-	50	52.217
ENSCPBG00000001526	-	84	43.655	ENSCPBG00000009849	-	83	43.655
ENSCPBG00000001526	-	84	44.876	ENSCPBG00000009609	-	86	44.876
ENSCPBG00000001526	-	82	52.193	ENSCPBG00000003130	-	99	51.101
ENSCPBG00000001526	-	81	38.298	ENSCPBG00000024735	PRDM5	77	35.714
ENSCPBG00000001526	-	81	55.319	ENSCPBG00000026433	-	55	55.319
ENSCPBG00000001526	-	92	54.955	ENSCPBG00000001181	-	97	54.955
ENSCPBG00000001526	-	83	46.354	ENSCPBG00000005715	ZBTB49	50	45.876
ENSCPBG00000001526	-	86	44.922	ENSCPBG00000005586	-	67	42.612
ENSCPBG00000001526	-	80	52.381	ENSCPBG00000004030	-	79	52.381
ENSCPBG00000001526	-	88	52.239	ENSCPBG00000017494	-	91	51.701
ENSCPBG00000001526	-	88	40.078	ENSCPBG00000023418	-	51	40.078
ENSCPBG00000001526	-	84	49.580	ENSCPBG00000015987	-	65	49.580
ENSCPBG00000001526	-	93	51.835	ENSCPBG00000003774	-	92	47.541
ENSCPBG00000001526	-	80	50.407	ENSCPBG00000001258	-	91	49.112
ENSCPBG00000001526	-	79	55.405	ENSCPBG00000016841	-	98	55.405
ENSCPBG00000001526	-	84	50.685	ENSCPBG00000017489	-	95	50.685
ENSCPBG00000001526	-	93	39.919	ENSCPBG00000008580	-	90	38.800
ENSCPBG00000001526	-	89	41.667	ENSCPBG00000004542	ZNF865	82	41.667
ENSCPBG00000001526	-	79	49.115	ENSCPBG00000021487	-	74	49.115
ENSCPBG00000001526	-	81	41.284	ENSCPBG00000026947	ZNF319	95	41.284
ENSCPBG00000001526	-	83	47.368	ENSCPBG00000002063	-	70	47.368
ENSCPBG00000001526	-	93	47.531	ENSCPBG00000001421	-	98	48.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000001526	-	85	48.852	ENSACAG00000008664	-	68	48.852	Anolis_carolinensis
ENSCPBG00000001526	-	79	45.290	ENSACAG00000024898	-	98	45.290	Anolis_carolinensis
ENSCPBG00000001526	-	80	42.525	ENSACAG00000024956	-	77	42.525	Anolis_carolinensis
ENSCPBG00000001526	-	80	50.233	ENSAMXG00000036233	-	79	50.233	Astyanax_mexicanus
ENSCPBG00000001526	-	82	46.844	ENSAMXG00000025452	-	99	46.844	Astyanax_mexicanus
ENSCPBG00000001526	-	79	46.067	ENSAMXG00000042746	-	93	46.067	Astyanax_mexicanus
ENSCPBG00000001526	-	91	44.803	ENSAMXG00000010805	-	95	44.518	Astyanax_mexicanus
ENSCPBG00000001526	-	95	49.825	ENSAMXG00000034847	-	89	49.825	Astyanax_mexicanus
ENSCPBG00000001526	-	80	50.877	ENSAMXG00000042784	-	97	50.877	Astyanax_mexicanus
ENSCPBG00000001526	-	82	60.156	ENSAMXG00000035246	-	74	60.156	Astyanax_mexicanus
ENSCPBG00000001526	-	82	43.963	ENSAMXG00000038325	-	95	44.770	Astyanax_mexicanus
ENSCPBG00000001526	-	89	44.366	ENSAMXG00000040198	-	55	44.366	Astyanax_mexicanus
ENSCPBG00000001526	-	82	46.442	ENSAMXG00000038536	-	94	46.442	Astyanax_mexicanus
ENSCPBG00000001526	-	86	48.649	ENSAMXG00000032841	-	85	48.649	Astyanax_mexicanus
ENSCPBG00000001526	-	77	48.837	ENSAMXG00000038636	-	98	48.837	Astyanax_mexicanus
ENSCPBG00000001526	-	84	47.807	ENSAMXG00000034344	-	84	47.807	Astyanax_mexicanus
ENSCPBG00000001526	-	97	39.233	ENSBTAG00000038322	-	84	41.343	Bos_taurus
ENSCPBG00000001526	-	90	42.593	ENSCSAVG00000010960	-	100	45.312	Ciona_savignyi
ENSCPBG00000001526	-	85	39.339	ENSDNOG00000047495	-	84	45.070	Dasypus_novemcinctus
ENSCPBG00000001526	-	86	39.465	ENSEBUG00000013875	-	84	39.465	Eptatretus_burgeri
ENSCPBG00000001526	-	88	49.219	ENSEBUG00000008306	-	79	49.219	Eptatretus_burgeri
ENSCPBG00000001526	-	90	47.761	ENSEBUG00000002075	-	78	48.062	Eptatretus_burgeri
ENSCPBG00000001526	-	81	45.522	ENSEBUG00000011694	-	96	45.522	Eptatretus_burgeri
ENSCPBG00000001526	-	89	49.466	ENSEBUG00000012919	-	76	49.466	Eptatretus_burgeri
ENSCPBG00000001526	-	80	50.746	ENSEBUG00000011435	-	81	48.214	Eptatretus_burgeri
ENSCPBG00000001526	-	92	45.374	ENSEBUG00000015837	-	89	45.374	Eptatretus_burgeri
ENSCPBG00000001526	-	85	48.198	ENSEBUG00000005264	-	73	48.198	Eptatretus_burgeri
ENSCPBG00000001526	-	84	43.373	ENSEBUG00000014717	-	73	43.373	Eptatretus_burgeri
ENSCPBG00000001526	-	79	41.367	ENSEASG00005004469	-	70	41.367	Equus_asinus_asinus
ENSCPBG00000001526	-	90	41.909	ENSGMOG00000018506	-	100	41.909	Gadus_morhua
ENSCPBG00000001526	-	79	45.113	ENSGALG00000053507	-	78	44.660	Gallus_gallus
ENSCPBG00000001526	-	79	50.199	ENSGALG00000046336	-	98	50.199	Gallus_gallus
ENSCPBG00000001526	-	84	49.175	ENSGALG00000044069	-	55	51.600	Gallus_gallus
ENSCPBG00000001526	-	79	47.841	ENSGALG00000055127	-	76	47.841	Gallus_gallus
ENSCPBG00000001526	-	96	48.173	ENSGALG00000054325	-	97	48.173	Gallus_gallus
ENSCPBG00000001526	-	82	43.312	ENSGALG00000049609	-	57	43.312	Gallus_gallus
ENSCPBG00000001526	-	83	48.450	ENSGACG00000006283	-	98	48.837	Gasterosteus_aculeatus
ENSCPBG00000001526	-	87	43.644	ENSGAGG00000018885	-	71	43.644	Gopherus_agassizii
ENSCPBG00000001526	-	83	47.508	ENSGAGG00000011366	-	97	47.508	Gopherus_agassizii
ENSCPBG00000001526	-	94	95.378	ENSGAGG00000011399	-	94	95.378	Gopherus_agassizii
ENSCPBG00000001526	-	94	40.062	ENSHCOG00000018201	-	90	37.500	Hippocampus_comes
ENSCPBG00000001526	-	90	46.484	ENSIPUG00000015468	-	92	46.484	Ictalurus_punctatus
ENSCPBG00000001526	-	79	45.583	ENSIPUG00000021515	-	98	45.583	Ictalurus_punctatus
ENSCPBG00000001526	-	88	39.924	ENSIPUG00000012109	ZN12	56	39.924	Ictalurus_punctatus
ENSCPBG00000001526	-	79	38.218	ENSJJAG00000023633	Zfp672	89	42.553	Jaculus_jaculus
ENSCPBG00000001526	-	92	46.557	ENSLACG00000022211	-	86	46.557	Latimeria_chalumnae
ENSCPBG00000001526	-	87	39.310	ENSLACG00000005264	-	98	40.316	Latimeria_chalumnae
ENSCPBG00000001526	-	87	34.973	ENSLACG00000009005	-	100	38.732	Latimeria_chalumnae
ENSCPBG00000001526	-	79	43.648	ENSLOCG00000017864	-	99	43.648	Lepisosteus_oculatus
ENSCPBG00000001526	-	84	47.059	ENSMGAG00000013362	-	100	47.059	Meleagris_gallopavo
ENSCPBG00000001526	-	86	38.793	ENSMAUG00000009945	Zfp672	89	41.489	Mesocricetus_auratus
ENSCPBG00000001526	-	91	62.195	ENSMMOG00000003923	-	86	62.195	Mola_mola
ENSCPBG00000001526	-	84	41.830	ENSMODG00000010532	-	86	41.830	Monodelphis_domestica
ENSCPBG00000001526	-	81	42.053	ENSMODG00000014052	-	99	42.053	Monodelphis_domestica
ENSCPBG00000001526	-	83	42.574	ENSMODG00000001880	-	80	42.574	Monodelphis_domestica
ENSCPBG00000001526	-	77	45.652	MGP_CAROLIEiJ_G0030502	-	63	45.652	Mus_caroli
ENSCPBG00000001526	-	90	41.053	MGP_CAROLIEiJ_G0016391	Zfp672	98	42.500	Mus_caroli
ENSCPBG00000001526	-	83	45.818	ENSMUSG00000030823	9130019O22Rik	67	45.818	Mus_musculus
ENSCPBG00000001526	-	90	41.053	MGP_SPRETEiJ_G0017233	Zfp672	98	42.500	Mus_spretus
ENSCPBG00000001526	-	83	47.244	MGP_SPRETEiJ_G0031613	-	86	45.290	Mus_spretus
ENSCPBG00000001526	-	82	44.582	ENSNGAG00000015777	Zim1	57	44.582	Nannospalax_galili
ENSCPBG00000001526	-	80	43.777	ENSNBRG00000000708	-	89	42.786	Neolamprologus_brichardi
ENSCPBG00000001526	-	80	42.975	ENSNBRG00000007276	-	50	42.975	Neolamprologus_brichardi
ENSCPBG00000001526	-	79	60.897	ENSORLG00020001922	-	88	60.000	Oryzias_latipes_hni
ENSCPBG00000001526	-	88	66.667	ENSOMEG00000001598	-	81	68.462	Oryzias_melastigma
ENSCPBG00000001526	-	86	44.304	ENSPSIG00000012650	-	76	44.304	Pelodiscus_sinensis
ENSCPBG00000001526	-	92	48.582	ENSPSIG00000016380	-	72	48.582	Pelodiscus_sinensis
ENSCPBG00000001526	-	85	47.191	ENSPSIG00000005672	-	67	47.191	Pelodiscus_sinensis
ENSCPBG00000001526	-	79	48.684	ENSPSIG00000006790	-	94	48.684	Pelodiscus_sinensis
ENSCPBG00000001526	-	87	48.450	ENSPSIG00000015459	-	73	48.450	Pelodiscus_sinensis
ENSCPBG00000001526	-	80	44.218	ENSPSIG00000004502	-	59	44.218	Pelodiscus_sinensis
ENSCPBG00000001526	-	82	43.494	ENSPSIG00000005603	-	67	43.494	Pelodiscus_sinensis
ENSCPBG00000001526	-	89	45.923	ENSPSIG00000010328	-	75	45.923	Pelodiscus_sinensis
ENSCPBG00000001526	-	90	97.586	ENSPSIG00000000672	-	100	97.586	Pelodiscus_sinensis
ENSCPBG00000001526	-	81	50.407	ENSPSIG00000010248	-	67	50.407	Pelodiscus_sinensis
ENSCPBG00000001526	-	82	44.118	ENSPSIG00000006586	-	99	43.643	Pelodiscus_sinensis
ENSCPBG00000001526	-	80	46.154	ENSPSIG00000003152	-	79	46.154	Pelodiscus_sinensis
ENSCPBG00000001526	-	90	50.000	ENSPSIG00000013021	-	77	50.000	Pelodiscus_sinensis
ENSCPBG00000001526	-	82	40.000	ENSPREG00000002642	-	91	40.000	Poecilia_reticulata
ENSCPBG00000001526	-	79	46.721	ENSPNYG00000015486	-	51	46.721	Pundamilia_nyererei
ENSCPBG00000001526	-	80	49.107	ENSPNAG00000018395	-	66	47.727	Pygocentrus_nattereri
ENSCPBG00000001526	-	87	49.664	ENSPNAG00000000088	-	89	49.664	Pygocentrus_nattereri
ENSCPBG00000001526	-	85	41.549	ENSRNOG00000002713	Zfp672	89	41.549	Rattus_norvegicus
ENSCPBG00000001526	-	85	40.064	ENSSHAG00000018106	-	78	40.767	Sarcophilus_harrisii
ENSCPBG00000001526	-	97	45.246	ENSSFOG00015019818	-	77	51.584	Scleropages_formosus
ENSCPBG00000001526	-	81	38.095	ENSSMAG00000004252	-	85	36.474	Scophthalmus_maximus
ENSCPBG00000001526	-	80	53.960	ENSSPUG00000004366	-	61	50.840	Sphenodon_punctatus
ENSCPBG00000001526	-	84	50.000	ENSSPUG00000010016	-	93	50.000	Sphenodon_punctatus
ENSCPBG00000001526	-	83	71.818	ENSSPAG00000021653	-	94	71.818	Stegastes_partitus
ENSCPBG00000001526	-	84	48.085	ENSTGUG00000015210	-	100	48.085	Taeniopygia_guttata
ENSCPBG00000001526	-	78	58.333	ENSTGUG00000018351	-	99	58.333	Taeniopygia_guttata
ENSCPBG00000001526	-	91	46.721	ENSTRUG00000022066	-	94	43.077	Takifugu_rubripes
ENSCPBG00000001526	-	85	45.783	ENSXETG00000031192	-	100	44.000	Xenopus_tropicalis
ENSCPBG00000001526	-	81	52.444	ENSXCOG00000006553	-	86	52.444	Xiphophorus_couchianus
ENSCPBG00000001526	-	90	37.885	ENSXMAG00000026680	-	93	37.885	Xiphophorus_maculatus