EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000001818 (Gene tree)
Gene ID: 101951040
Gene Symbol: RBBP6
Alias: P2P-R|PACT|SNAMA
Full Name: RB binding protein 6%2C ubiquitin ligase
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 39101 bases
Position: chrKK088234.1:15575183-15614283
Accession: 9889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000002280	zf-CCHC_2	PF13696.6	1.1e-08	1	1
ENSCPBP00000002267	zf-CCHC_2	PF13696.6	1.2e-08	1	1
ENSCPBP00000002255	zf-CCHC_2	PF13696.6	1.2e-08	1	1
ENSCPBP00000002280	zf-CCHC	PF00098.23	7.9e-05	1	1
ENSCPBP00000002267	zf-CCHC	PF00098.23	8.7e-05	1	1
ENSCPBP00000002255	zf-CCHC	PF00098.23	8.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000002785	RBBP6-203	5466	-	ENSCPBP00000002280	1653 (aa)	XP_008163024	UPI00046BF4E7
ENSCPBT00000002751	RBBP6-201	5832	-	ENSCPBP00000002255	1775 (aa)	XP_008163020	UPI00046C1A6D
ENSCPBT00000002770	RBBP6-202	5793	-	ENSCPBP00000002267	1762 (aa)	XP_008163022	UPI00046C1127

Gene Model

Click here to download ENSCPBG00000001818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000001818's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000001818	RBBP6	95	79.623	ENSG00000122257	RBBP6	100	96.203	Homo_sapiens
ENSCPBG00000001818	RBBP6	94	81.274	ENSAMEG00000009312	RBBP6	94	75.279	Ailuropoda_melanoleuca
ENSCPBG00000001818	RBBP6	90	81.144	ENSAPLG00000009569	RBBP6	95	81.868	Anas_platyrhynchos
ENSCPBG00000001818	RBBP6	52	72.008	ENSACAG00000011794	RBBP6	100	72.468	Anolis_carolinensis
ENSCPBG00000001818	RBBP6	95	79.434	ENSANAG00000037384	RBBP6	96	82.751	Aotus_nancymaae
ENSCPBG00000001818	RBBP6	100	81.034	ENSBTAG00000009441	RBBP6	95	80.806	Bos_taurus
ENSCPBG00000001818	RBBP6	95	77.395	ENSCJAG00000020661	RBBP6	96	82.751	Callithrix_jacchus
ENSCPBG00000001818	RBBP6	96	80.651	ENSCAFG00000017566	RBBP6	92	80.422	Canis_familiaris
ENSCPBG00000001818	RBBP6	100	80.806	ENSCHIG00000013732	RBBP6	96	80.422	Capra_hircus
ENSCPBG00000001818	RBBP6	94	80.651	ENSTSYG00000000822	RBBP6	96	86.480	Carlito_syrichta
ENSCPBG00000001818	RBBP6	90	68.082	ENSCAPG00000012399	RBBP6	94	68.069	Cavia_aperea
ENSCPBG00000001818	RBBP6	93	74.664	ENSCPOG00000040025	RBBP6	94	73.647	Cavia_porcellus
ENSCPBG00000001818	RBBP6	95	80.268	ENSCCAG00000023229	RBBP6	96	86.247	Cebus_capucinus
ENSCPBG00000001818	RBBP6	95	79.434	ENSCATG00000033601	RBBP6	96	86.247	Cercocebus_atys
ENSCPBG00000001818	RBBP6	93	80.077	ENSCLAG00000009872	RBBP6	89	79.655	Chinchilla_lanigera
ENSCPBG00000001818	RBBP6	95	79.623	ENSCSAG00000006609	RBBP6	89	80.230	Chlorocebus_sabaeus
ENSCPBG00000001818	RBBP6	64	85.047	ENSCHOG00000000278	RBBP6	62	85.047	Choloepus_hoffmanni
ENSCPBG00000001818	RBBP6	95	79.623	ENSCANG00000039613	RBBP6	96	86.713	Colobus_angolensis_palliatus
ENSCPBG00000001818	RBBP6	94	79.885	ENSCGRG00001017193	Rbbp6	88	79.846	Cricetulus_griseus_chok1gshd
ENSCPBG00000001818	RBBP6	94	79.885	ENSCGRG00000011887	Rbbp6	88	79.846	Cricetulus_griseus_crigri
ENSCPBG00000001818	RBBP6	100	81.190	ENSDNOG00000048802	RBBP6	95	80.998	Dasypus_novemcinctus
ENSCPBG00000001818	RBBP6	95	76.792	ENSDORG00000010285	Rbbp6	90	76.923	Dipodomys_ordii
ENSCPBG00000001818	RBBP6	90	76.344	ENSEEUG00000001683	RBBP6	87	77.419	Erinaceus_europaeus
ENSCPBG00000001818	RBBP6	94	81.190	ENSFCAG00000043694	RBBP6	96	87.383	Felis_catus
ENSCPBG00000001818	RBBP6	92	79.088	ENSFALG00000003750	RBBP6	95	79.105	Ficedula_albicollis
ENSCPBG00000001818	RBBP6	93	77.358	ENSFDAG00000013132	RBBP6	89	77.735	Fukomys_damarensis
ENSCPBG00000001818	RBBP6	98	83.051	ENSGALG00000006043	RBBP6	86	83.452	Gallus_gallus
ENSCPBG00000001818	RBBP6	100	98.043	ENSGAGG00000004371	RBBP6	100	98.043	Gopherus_agassizii
ENSCPBG00000001818	RBBP6	95	80.268	ENSGGOG00000007137	RBBP6	96	86.247	Gorilla_gorilla
ENSCPBG00000001818	RBBP6	94	77.176	ENSHGLG00000008327	RBBP6	89	77.176	Heterocephalus_glaber_female
ENSCPBG00000001818	RBBP6	96	76.181	ENSHGLG00100007773	RBBP6	93	77.735	Heterocephalus_glaber_male
ENSCPBG00000001818	RBBP6	93	80.268	ENSSTOG00000016006	RBBP6	89	80.038	Ictidomys_tridecemlineatus
ENSCPBG00000001818	RBBP6	94	77.186	ENSJJAG00000014549	Rbbp6	89	76.908	Jaculus_jaculus
ENSCPBG00000001818	RBBP6	99	72.274	ENSLACG00000012333	RBBP6	90	71.751	Latimeria_chalumnae
ENSCPBG00000001818	RBBP6	93	66.239	ENSLOCG00000005487	RBBP6	87	66.474	Lepisosteus_oculatus
ENSCPBG00000001818	RBBP6	94	80.038	ENSLAFG00000009528	RBBP6	89	80.422	Loxodonta_africana
ENSCPBG00000001818	RBBP6	95	80.460	ENSMFAG00000038627	RBBP6	96	86.480	Macaca_fascicularis
ENSCPBG00000001818	RBBP6	95	80.460	ENSMMUG00000015908	RBBP6	96	86.480	Macaca_mulatta
ENSCPBG00000001818	RBBP6	95	80.268	ENSMNEG00000033630	RBBP6	96	86.480	Macaca_nemestrina
ENSCPBG00000001818	RBBP6	95	79.623	ENSMLEG00000030073	RBBP6	96	86.480	Mandrillus_leucophaeus
ENSCPBG00000001818	RBBP6	93	80.668	ENSMGAG00000006423	RBBP6	94	80.837	Meleagris_gallopavo
ENSCPBG00000001818	RBBP6	94	79.623	ENSMICG00000008059	RBBP6	89	86.480	Microcebus_murinus
ENSCPBG00000001818	RBBP6	92	78.202	ENSMODG00000016318	-	92	78.202	Monodelphis_domestica
ENSCPBG00000001818	RBBP6	71	75.275	MGP_CAROLIEiJ_G0030424	-	96	74.124	Mus_caroli
ENSCPBG00000001818	RBBP6	94	79.350	ENSMUSG00000030779	Rbbp6	98	72.225	Mus_musculus
ENSCPBG00000001818	RBBP6	93	78.776	MGP_PahariEiJ_G0013634	Rbbp6	94	73.090	Mus_pahari
ENSCPBG00000001818	RBBP6	94	79.502	MGP_SPRETEiJ_G0031538	Rbbp6	94	74.015	Mus_spretus
ENSCPBG00000001818	RBBP6	94	80.843	ENSMPUG00000012318	RBBP6	89	80.614	Mustela_putorius_furo
ENSCPBG00000001818	RBBP6	94	78.571	ENSMLUG00000010601	-	91	78.755	Myotis_lucifugus
ENSCPBG00000001818	RBBP6	93	77.170	ENSNGAG00000002381	Rbbp6	90	77.927	Nannospalax_galili
ENSCPBG00000001818	RBBP6	88	82.085	ENSNLEG00000011896	RBBP6	96	86.247	Nomascus_leucogenys
ENSCPBG00000001818	RBBP6	82	82.570	ENSMEUG00000014491	RBBP6	81	82.570	Notamacropus_eugenii
ENSCPBG00000001818	RBBP6	57	85.714	ENSOPRG00000016272	RBBP6	57	85.468	Ochotona_princeps
ENSCPBG00000001818	RBBP6	93	77.351	ENSODEG00000012319	RBBP6	89	77.159	Octodon_degus
ENSCPBG00000001818	RBBP6	95	76.304	ENSOANG00000007673	RBBP6	92	78.351	Ornithorhynchus_anatinus
ENSCPBG00000001818	RBBP6	98	80.614	ENSOCUG00000004346	RBBP6	94	80.614	Oryctolagus_cuniculus
ENSCPBG00000001818	RBBP6	94	79.846	ENSOGAG00000026986	RBBP6	89	79.846	Otolemur_garnettii
ENSCPBG00000001818	RBBP6	100	80.000	ENSOARG00000017741	RBBP6	96	79.623	Ovis_aries
ENSCPBG00000001818	RBBP6	95	78.736	ENSPPAG00000023595	RBBP6	90	78.503	Pan_paniscus
ENSCPBG00000001818	RBBP6	94	80.998	ENSPPRG00000004074	RBBP6	96	87.383	Panthera_pardus
ENSCPBG00000001818	RBBP6	94	80.998	ENSPTIG00000010342	RBBP6	96	87.383	Panthera_tigris_altaica
ENSCPBG00000001818	RBBP6	95	80.460	ENSPTRG00000007897	RBBP6	96	86.480	Pan_troglodytes
ENSCPBG00000001818	RBBP6	95	79.811	ENSPANG00000019625	RBBP6	96	86.713	Papio_anubis
ENSCPBG00000001818	RBBP6	70	64.794	ENSPKIG00000018682	RBBP6	66	64.419	Paramormyrops_kingsleyae
ENSCPBG00000001818	RBBP6	97	95.175	ENSPSIG00000004108	RBBP6	99	93.953	Pelodiscus_sinensis
ENSCPBG00000001818	RBBP6	94	83.015	ENSPCIG00000014000	RBBP6	90	82.252	Phascolarctos_cinereus
ENSCPBG00000001818	RBBP6	90	80.460	ENSPPYG00000007201	RBBP6	83	80.230	Pongo_abelii
ENSCPBG00000001818	RBBP6	94	79.434	ENSPCOG00000021939	RBBP6	89	86.480	Propithecus_coquereli
ENSCPBG00000001818	RBBP6	83	76.415	ENSPVAG00000001110	RBBP6	77	76.967	Pteropus_vampyrus
ENSCPBG00000001818	RBBP6	94	79.924	ENSRNOG00000012806	Rbbp6	94	73.765	Rattus_norvegicus
ENSCPBG00000001818	RBBP6	91	77.739	ENSRBIG00000004517	RBBP6	97	81.280	Rhinopithecus_bieti
ENSCPBG00000001818	RBBP6	95	79.434	ENSRROG00000032092	RBBP6	96	86.480	Rhinopithecus_roxellana
ENSCPBG00000001818	RBBP6	95	77.736	ENSSBOG00000021666	RBBP6	96	82.751	Saimiri_boliviensis_boliviensis
ENSCPBG00000001818	RBBP6	94	81.298	ENSSHAG00000004727	-	89	80.880	Sarcophilus_harrisii
ENSCPBG00000001818	RBBP6	94	78.947	ENSSARG00000004977	RBBP6	93	79.187	Sorex_araneus
ENSCPBG00000001818	RBBP6	94	81.382	ENSSSCG00000007830	RBBP6	89	81.382	Sus_scrofa
ENSCPBG00000001818	RBBP6	94	78.694	ENSTGUG00000006185	RBBP6	94	77.609	Taeniopygia_guttata
ENSCPBG00000001818	RBBP6	94	76.181	ENSTTRG00000002696	RBBP6	89	77.308	Tursiops_truncatus
ENSCPBG00000001818	RBBP6	94	78.352	ENSUMAG00000008537	RBBP6	88	78.119	Ursus_maritimus
ENSCPBG00000001818	RBBP6	63	81.579	ENSVPAG00000006458	RBBP6	79	76.847	Vicugna_pacos
ENSCPBG00000001818	RBBP6	94	80.651	ENSVVUG00000005484	RBBP6	89	79.846	Vulpes_vulpes