EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000001881 (Gene tree)
Gene ID: 101950474
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 35536 bases
Position: chrKK088234.1:15799456-15834991
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000002345	Ago_hook	PF10427.9	7.2e-12	1	1
ENSCPBP00000002333	Ago_hook	PF10427.9	7.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000002870	TNRC6A-202	5613	-	ENSCPBP00000002345	1717 (aa)	-	-
ENSCPBT00000002856	TNRC6A-201	5547	-	ENSCPBP00000002333	1718 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000001881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000001881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000001881	TNRC6A	98	43.292	ENSCPBG00000027960	TNRC6C	99	44.911
ENSCPBG00000001881	TNRC6A	91	36.780	ENSCPBG00000022932	TNRC6B	91	36.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000001881	TNRC6A	99	82.390	ENSG00000090905	TNRC6A	100	92.500	Homo_sapiens
ENSCPBG00000001881	TNRC6A	99	80.124	ENSAMEG00000009333	TNRC6A	93	80.067	Ailuropoda_melanoleuca
ENSCPBG00000001881	TNRC6A	99	90.592	ENSAPLG00000009978	TNRC6A	94	90.873	Anas_platyrhynchos
ENSCPBG00000001881	TNRC6A	99	56.786	ENSACAG00000011857	TNRC6A	91	58.224	Anolis_carolinensis
ENSCPBG00000001881	TNRC6A	99	81.871	ENSANAG00000025252	TNRC6A	90	81.871	Aotus_nancymaae
ENSCPBG00000001881	TNRC6A	100	59.363	ENSAMXG00000019919	tnrc6a	100	58.711	Astyanax_mexicanus
ENSCPBG00000001881	TNRC6A	99	82.278	ENSBTAG00000017999	TNRC6A	93	81.755	Bos_taurus
ENSCPBG00000001881	TNRC6A	99	81.986	ENSCJAG00000020677	TNRC6A	89	81.986	Callithrix_jacchus
ENSCPBG00000001881	TNRC6A	99	82.679	ENSCAFG00000017531	TNRC6A	92	82.679	Canis_familiaris
ENSCPBG00000001881	TNRC6A	99	81.467	ENSCAFG00020021160	TNRC6A	93	81.409	Canis_lupus_dingo
ENSCPBG00000001881	TNRC6A	99	81.845	ENSCHIG00000019448	TNRC6A	97	81.845	Capra_hircus
ENSCPBG00000001881	TNRC6A	99	81.928	ENSTSYG00000012711	TNRC6A	90	81.928	Carlito_syrichta
ENSCPBG00000001881	TNRC6A	99	81.871	ENSCPOG00000036684	TNRC6A	91	81.871	Cavia_porcellus
ENSCPBG00000001881	TNRC6A	99	82.159	ENSCCAG00000033664	TNRC6A	90	82.159	Cebus_capucinus
ENSCPBG00000001881	TNRC6A	99	82.390	ENSCATG00000019284	TNRC6A	91	82.390	Cercocebus_atys
ENSCPBG00000001881	TNRC6A	99	78.881	ENSCLAG00000010217	TNRC6A	90	78.881	Chinchilla_lanigera
ENSCPBG00000001881	TNRC6A	99	80.067	ENSCSAG00000006561	TNRC6A	91	80.011	Chlorocebus_sabaeus
ENSCPBG00000001881	TNRC6A	94	75.832	ENSCHOG00000009374	TNRC6A	85	75.815	Choloepus_hoffmanni
ENSCPBG00000001881	TNRC6A	99	82.390	ENSCANG00000041549	TNRC6A	90	82.390	Colobus_angolensis_palliatus
ENSCPBG00000001881	TNRC6A	99	81.005	ENSCGRG00001015021	Tnrc6a	91	81.120	Cricetulus_griseus_chok1gshd
ENSCPBG00000001881	TNRC6A	99	80.600	ENSCGRG00000013351	Tnrc6a	91	80.716	Cricetulus_griseus_crigri
ENSCPBG00000001881	TNRC6A	100	59.854	ENSDARG00000079688	tnrc6a	100	59.989	Danio_rerio
ENSCPBG00000001881	TNRC6A	99	78.587	ENSDNOG00000013989	TNRC6A	92	78.531	Dasypus_novemcinctus
ENSCPBG00000001881	TNRC6A	99	72.993	ENSETEG00000014658	TNRC6A	92	72.993	Echinops_telfairi
ENSCPBG00000001881	TNRC6A	99	81.823	ENSEASG00005017693	TNRC6A	97	79.820	Equus_asinus_asinus
ENSCPBG00000001881	TNRC6A	99	81.823	ENSECAG00000025056	TNRC6A	97	79.820	Equus_caballus
ENSCPBG00000001881	TNRC6A	99	74.074	ENSEEUG00000004530	TNRC6A	92	74.074	Erinaceus_europaeus
ENSCPBG00000001881	TNRC6A	99	81.939	ENSFCAG00000025236	TNRC6A	90	81.939	Felis_catus
ENSCPBG00000001881	TNRC6A	100	89.480	ENSFALG00000003757	TNRC6A	91	89.423	Ficedula_albicollis
ENSCPBG00000001881	TNRC6A	100	94.131	ENSGALG00000006068	TNRC6A	100	94.131	Gallus_gallus
ENSCPBG00000001881	TNRC6A	100	97.507	ENSGAGG00000023209	TNRC6A	100	97.507	Gopherus_agassizii
ENSCPBG00000001881	TNRC6A	99	82.333	ENSGGOG00000005137	TNRC6A	91	82.333	Gorilla_gorilla
ENSCPBG00000001881	TNRC6A	99	63.873	ENSHGLG00000007368	-	89	63.736	Heterocephalus_glaber_female
ENSCPBG00000001881	TNRC6A	99	80.589	ENSHGLG00000012474	-	91	80.600	Heterocephalus_glaber_female
ENSCPBG00000001881	TNRC6A	99	80.486	ENSHGLG00100012496	-	92	80.428	Heterocephalus_glaber_male
ENSCPBG00000001881	TNRC6A	99	80.282	ENSSTOG00000023394	TNRC6A	89	80.226	Ictidomys_tridecemlineatus
ENSCPBG00000001881	TNRC6A	99	73.071	ENSLACG00000006277	TNRC6A	95	73.126	Latimeria_chalumnae
ENSCPBG00000001881	TNRC6A	100	85.210	ENSLOCG00000005517	tnrc6a	85	85.210	Lepisosteus_oculatus
ENSCPBG00000001881	TNRC6A	99	81.593	ENSLAFG00000004209	TNRC6A	93	81.766	Loxodonta_africana
ENSCPBG00000001881	TNRC6A	99	79.607	ENSMFAG00000003824	TNRC6A	92	79.607	Macaca_fascicularis
ENSCPBG00000001881	TNRC6A	99	82.506	ENSMMUG00000020428	TNRC6A	90	82.506	Macaca_mulatta
ENSCPBG00000001881	TNRC6A	99	82.448	ENSMNEG00000034854	TNRC6A	90	82.448	Macaca_nemestrina
ENSCPBG00000001881	TNRC6A	99	79.438	ENSMLEG00000042737	TNRC6A	90	79.438	Mandrillus_leucophaeus
ENSCPBG00000001881	TNRC6A	99	89.770	ENSMGAG00000006455	TNRC6A	90	90.107	Meleagris_gallopavo
ENSCPBG00000001881	TNRC6A	99	81.062	ENSMAUG00000012750	Tnrc6a	91	81.178	Mesocricetus_auratus
ENSCPBG00000001881	TNRC6A	99	82.448	ENSMICG00000030685	TNRC6A	90	82.448	Microcebus_murinus
ENSCPBG00000001881	TNRC6A	99	81.059	ENSMOCG00000000152	Tnrc6a	91	81.002	Microtus_ochrogaster
ENSCPBG00000001881	TNRC6A	100	83.324	ENSMODG00000016348	TNRC6A	90	83.435	Monodelphis_domestica
ENSCPBG00000001881	TNRC6A	99	80.300	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	79.060	Mus_caroli
ENSCPBG00000001881	TNRC6A	99	80.820	ENSMUSG00000052707	Tnrc6a	99	79.558	Mus_musculus
ENSCPBG00000001881	TNRC6A	99	80.716	MGP_PahariEiJ_G0013635	Tnrc6a	100	79.558	Mus_pahari
ENSCPBG00000001881	TNRC6A	99	78.539	MGP_SPRETEiJ_G0031539	Tnrc6a	100	79.487	Mus_spretus
ENSCPBG00000001881	TNRC6A	99	75.073	ENSMPUG00000012324	TNRC6A	93	74.956	Mustela_putorius_furo
ENSCPBG00000001881	TNRC6A	99	77.485	ENSMLUG00000002701	TNRC6A	94	77.428	Myotis_lucifugus
ENSCPBG00000001881	TNRC6A	99	81.362	ENSNGAG00000020702	Tnrc6a	91	81.362	Nannospalax_galili
ENSCPBG00000001881	TNRC6A	99	81.153	ENSNLEG00000011851	TNRC6A	92	81.095	Nomascus_leucogenys
ENSCPBG00000001881	TNRC6A	74	83.259	ENSMEUG00000015959	-	68	83.259	Notamacropus_eugenii
ENSCPBG00000001881	TNRC6A	95	92.910	ENSOPRG00000005819	TNRC6A	86	92.910	Ochotona_princeps
ENSCPBG00000001881	TNRC6A	99	78.143	ENSODEG00000012802	TNRC6A	91	78.835	Octodon_degus
ENSCPBG00000001881	TNRC6A	96	83.596	ENSOANG00000007672	TNRC6A	100	83.654	Ornithorhynchus_anatinus
ENSCPBG00000001881	TNRC6A	99	77.946	ENSOCUG00000004325	TNRC6A	94	77.890	Oryctolagus_cuniculus
ENSCPBG00000001881	TNRC6A	99	80.090	ENSOGAG00000006666	TNRC6A	92	80.034	Otolemur_garnettii
ENSCPBG00000001881	TNRC6A	99	82.193	ENSOARG00000017950	TNRC6A	98	82.193	Ovis_aries
ENSCPBG00000001881	TNRC6A	99	82.390	ENSPPAG00000028379	TNRC6A	90	82.390	Pan_paniscus
ENSCPBG00000001881	TNRC6A	99	81.997	ENSPPRG00000005861	TNRC6A	90	81.997	Panthera_pardus
ENSCPBG00000001881	TNRC6A	99	82.054	ENSPTIG00000006346	TNRC6A	90	82.054	Panthera_tigris_altaica
ENSCPBG00000001881	TNRC6A	99	80.180	ENSPTRG00000007898	TNRC6A	92	80.124	Pan_troglodytes
ENSCPBG00000001881	TNRC6A	99	79.734	ENSPANG00000018523	TNRC6A	90	79.734	Papio_anubis
ENSCPBG00000001881	TNRC6A	85	90.828	ENSPSIG00000003965	TNRC6A	100	90.828	Pelodiscus_sinensis
ENSCPBG00000001881	TNRC6A	99	81.098	ENSPEMG00000016318	Tnrc6a	91	81.040	Peromyscus_maniculatus_bairdii
ENSCPBG00000001881	TNRC6A	100	87.297	ENSPCIG00000012106	TNRC6A	94	87.355	Phascolarctos_cinereus
ENSCPBG00000001881	TNRC6A	99	79.674	ENSPPYG00000007202	TNRC6A	90	79.618	Pongo_abelii
ENSCPBG00000001881	TNRC6A	94	87.629	ENSPCAG00000008260	TNRC6A	85	87.629	Procavia_capensis
ENSCPBG00000001881	TNRC6A	99	80.139	ENSPCOG00000010134	TNRC6A	90	80.139	Propithecus_coquereli
ENSCPBG00000001881	TNRC6A	88	62.301	ENSPVAG00000012066	TNRC6A	90	62.619	Pteropus_vampyrus
ENSCPBG00000001881	TNRC6A	99	81.120	ENSRNOG00000024737	Tnrc6a	90	81.062	Rattus_norvegicus
ENSCPBG00000001881	TNRC6A	99	82.275	ENSRBIG00000014222	TNRC6A	92	82.275	Rhinopithecus_bieti
ENSCPBG00000001881	TNRC6A	99	80.067	ENSRROG00000032360	TNRC6A	91	80.011	Rhinopithecus_roxellana
ENSCPBG00000001881	TNRC6A	99	79.730	ENSSBOG00000036197	TNRC6A	100	80.762	Saimiri_boliviensis_boliviensis
ENSCPBG00000001881	TNRC6A	100	85.771	ENSSHAG00000008811	TNRC6A	100	85.943	Sarcophilus_harrisii
ENSCPBG00000001881	TNRC6A	100	60.665	ENSSFOG00015008920	tnrc6a	96	83.186	Scleropages_formosus
ENSCPBG00000001881	TNRC6A	70	64.910	ENSSARG00000002479	TNRC6A	81	65.465	Sorex_araneus
ENSCPBG00000001881	TNRC6A	99	86.888	ENSSPUG00000010525	TNRC6A	100	86.954	Sphenodon_punctatus
ENSCPBG00000001881	TNRC6A	99	83.324	ENSSSCG00000038870	TNRC6A	100	83.503	Sus_scrofa
ENSCPBG00000001881	TNRC6A	99	90.371	ENSTGUG00000006142	TNRC6A	92	90.371	Taeniopygia_guttata
ENSCPBG00000001881	TNRC6A	99	77.485	ENSTBEG00000014965	TNRC6A	93	77.428	Tupaia_belangeri
ENSCPBG00000001881	TNRC6A	92	81.965	ENSTTRG00000002008	TNRC6A	84	81.965	Tursiops_truncatus
ENSCPBG00000001881	TNRC6A	79	79.275	ENSUAMG00000006656	-	85	79.275	Ursus_americanus
ENSCPBG00000001881	TNRC6A	99	80.067	ENSUMAG00000008274	TNRC6A	100	83.514	Ursus_maritimus
ENSCPBG00000001881	TNRC6A	99	82.506	ENSVVUG00000005380	TNRC6A	97	80.259	Vulpes_vulpes
ENSCPBG00000001881	TNRC6A	99	67.632	ENSXETG00000030437	TNRC6A	96	66.537	Xenopus_tropicalis