EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000001985 (Gene tree)
Gene ID: 101936674
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 255 bases
Position: chrKK083035.1:2527088-2527342
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000002464	LSM	PF01423.22	6.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000003014	-	255	XM_005306452	ENSCPBP00000002464	84 (aa)	XP_005306509	UPI0003890FB8

Gene Model

Click here to download ENSCPBG00000001985's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000001985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000001985	-	100	79.070	ENSCPBG00000026463	-	100	79.070
ENSCPBG00000001985	-	89	84.000	ENSCPBG00000006227	-	100	81.395
ENSCPBG00000001985	-	99	86.747	ENSCPBG00000024287	-	67	86.747
ENSCPBG00000001985	-	75	46.032	ENSCPBG00000027472	LSM6	66	46.032
ENSCPBG00000001985	-	51	90.698	ENSCPBG00000001948	-	83	90.698
ENSCPBG00000001985	-	80	68.657	ENSCPBG00000021923	-	84	68.657

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000001985	-	89	90.667	ENSG00000139343	SNRPF	100	88.372	Homo_sapiens
ENSCPBG00000001985	-	88	87.838	ENSAPOG00000003377	snrpf	66	85.882	Acanthochromis_polyacanthus
ENSCPBG00000001985	-	90	77.632	ENSAMEG00000018718	-	100	77.907	Ailuropoda_melanoleuca
ENSCPBG00000001985	-	88	90.541	ENSAMEG00000002166	-	100	88.235	Ailuropoda_melanoleuca
ENSCPBG00000001985	-	87	87.671	ENSACIG00000013216	snrpf	99	85.714	Amphilophus_citrinellus
ENSCPBG00000001985	-	87	87.671	ENSAOCG00000015108	snrpf	99	85.714	Amphiprion_ocellaris
ENSCPBG00000001985	-	87	87.671	ENSAPEG00000022022	snrpf	99	85.714	Amphiprion_percula
ENSCPBG00000001985	-	87	87.671	ENSATEG00000022625	snrpf	90	85.714	Anabas_testudineus
ENSCPBG00000001985	-	88	89.189	ENSACAG00000014073	SNRPF	98	87.059	Anolis_carolinensis
ENSCPBG00000001985	-	89	90.667	ENSANAG00000032845	SNRPF	100	88.372	Aotus_nancymaae
ENSCPBG00000001985	-	89	62.667	ENSANAG00000025860	-	100	62.791	Aotus_nancymaae
ENSCPBG00000001985	-	85	81.690	ENSANAG00000020297	-	75	80.488	Aotus_nancymaae
ENSCPBG00000001985	-	87	87.671	ENSACLG00000016066	snrpf	99	85.714	Astatotilapia_calliptera
ENSCPBG00000001985	-	89	86.667	ENSAMXG00000007421	snrpf	100	84.884	Astyanax_mexicanus
ENSCPBG00000001985	-	89	90.667	ENSBTAG00000016271	SNRPF	100	88.372	Bos_taurus
ENSCPBG00000001985	-	96	83.951	ENSBTAG00000050012	-	100	83.951	Bos_taurus
ENSCPBG00000001985	-	90	64.474	WBGene00004918	snr-5	89	64.474	Caenorhabditis_elegans
ENSCPBG00000001985	-	89	90.667	ENSCJAG00000002705	-	100	88.372	Callithrix_jacchus
ENSCPBG00000001985	-	89	90.667	ENSCAFG00000006395	-	77	88.372	Canis_familiaris
ENSCPBG00000001985	-	87	82.192	ENSCAFG00000031151	-	100	80.233	Canis_familiaris
ENSCPBG00000001985	-	87	83.562	ENSCAFG00020013161	-	78	83.562	Canis_lupus_dingo
ENSCPBG00000001985	-	87	82.192	ENSCAFG00020010823	-	100	80.233	Canis_lupus_dingo
ENSCPBG00000001985	-	96	81.481	ENSTSYG00000031636	-	68	81.481	Carlito_syrichta
ENSCPBG00000001985	-	89	84.211	ENSTSYG00000036502	-	100	82.759	Carlito_syrichta
ENSCPBG00000001985	-	89	78.667	ENSTSYG00000030635	-	100	77.907	Carlito_syrichta
ENSCPBG00000001985	-	88	90.541	ENSCAPG00000007242	SNRPF	100	88.235	Cavia_aperea
ENSCPBG00000001985	-	89	90.667	ENSCPOG00000013898	SNRPF	100	88.372	Cavia_porcellus
ENSCPBG00000001985	-	89	90.667	ENSCCAG00000037378	-	100	88.372	Cebus_capucinus
ENSCPBG00000001985	-	87	90.411	ENSCCAG00000017356	-	100	88.372	Cebus_capucinus
ENSCPBG00000001985	-	100	77.907	ENSCCAG00000033627	-	68	77.907	Cebus_capucinus
ENSCPBG00000001985	-	89	90.667	ENSCLAG00000007200	SNRPF	100	88.372	Chinchilla_lanigera
ENSCPBG00000001985	-	89	90.667	ENSCSAG00000003602	-	70	88.372	Chlorocebus_sabaeus
ENSCPBG00000001985	-	76	92.188	ENSCHOG00000009392	SNRPF	100	92.188	Choloepus_hoffmanni
ENSCPBG00000001985	-	99	78.824	ENSCSAVG00000007498	-	97	78.824	Ciona_savignyi
ENSCPBG00000001985	-	89	82.667	ENSCGRG00001008965	-	67	81.395	Cricetulus_griseus_chok1gshd
ENSCPBG00000001985	-	89	90.667	ENSCGRG00001017100	-	100	88.372	Cricetulus_griseus_chok1gshd
ENSCPBG00000001985	-	89	90.667	ENSCGRG00000000336	-	100	88.372	Cricetulus_griseus_crigri
ENSCPBG00000001985	-	94	82.278	ENSCGRG00000018878	-	99	82.278	Cricetulus_griseus_crigri
ENSCPBG00000001985	-	89	86.667	ENSCSEG00000004748	snrpf	100	84.884	Cynoglossus_semilaevis
ENSCPBG00000001985	-	88	87.838	ENSCVAG00000000397	snrpf	67	85.882	Cyprinodon_variegatus
ENSCPBG00000001985	-	89	85.714	ENSDARG00000105037	snrpf	100	84.091	Danio_rerio
ENSCPBG00000001985	-	89	90.667	ENSDNOG00000043775	-	55	88.372	Dasypus_novemcinctus
ENSCPBG00000001985	-	89	89.333	ENSDNOG00000048989	-	77	87.209	Dasypus_novemcinctus
ENSCPBG00000001985	-	89	74.667	ENSDNOG00000049373	-	75	73.256	Dasypus_novemcinctus
ENSCPBG00000001985	-	86	79.167	ENSDORG00000025351	-	100	79.167	Dipodomys_ordii
ENSCPBG00000001985	-	70	89.831	ENSDORG00000029740	-	85	87.143	Dipodomys_ordii
ENSCPBG00000001985	-	98	70.238	FBgn0000426	SmF	95	70.238	Drosophila_melanogaster
ENSCPBG00000001985	-	89	90.667	ENSETEG00000001558	-	100	88.372	Echinops_telfairi
ENSCPBG00000001985	-	89	71.053	ENSEBUG00000001793	-	82	71.053	Eptatretus_burgeri
ENSCPBG00000001985	-	89	90.667	ENSECAG00000019817	SNRPF	70	88.372	Equus_caballus
ENSCPBG00000001985	-	88	90.541	ENSEEUG00000013509	SNRPF	100	88.235	Erinaceus_europaeus
ENSCPBG00000001985	-	100	81.395	ENSELUG00000007737	RUXF	99	81.395	Esox_lucius
ENSCPBG00000001985	-	89	85.333	ENSELUG00000003121	RUXF	100	83.721	Esox_lucius
ENSCPBG00000001985	-	89	90.667	ENSFCAG00000029966	-	100	88.372	Felis_catus
ENSCPBG00000001985	-	89	68.000	ENSFCAG00000021942	-	100	68.605	Felis_catus
ENSCPBG00000001985	-	98	67.857	ENSFCAG00000031148	-	77	67.857	Felis_catus
ENSCPBG00000001985	-	88	90.541	ENSFALG00000010799	SNRPF	99	88.235	Ficedula_albicollis
ENSCPBG00000001985	-	89	90.667	ENSFDAG00000002831	-	100	88.372	Fukomys_damarensis
ENSCPBG00000001985	-	88	87.838	ENSFHEG00000003240	snrpf	75	85.882	Fundulus_heteroclitus
ENSCPBG00000001985	-	88	87.838	ENSGMOG00000007741	snrpf	100	85.882	Gadus_morhua
ENSCPBG00000001985	-	89	90.667	ENSGALG00000011409	SNRPF	100	88.372	Gallus_gallus
ENSCPBG00000001985	-	87	87.671	ENSGAFG00000016187	snrpf	97	85.714	Gambusia_affinis
ENSCPBG00000001985	-	88	86.486	ENSGACG00000020055	snrpf	100	84.706	Gasterosteus_aculeatus
ENSCPBG00000001985	-	86	86.111	ENSGAGG00000012945	-	77	84.524	Gopherus_agassizii
ENSCPBG00000001985	-	69	86.207	ENSGAGG00000011163	-	100	86.207	Gopherus_agassizii
ENSCPBG00000001985	-	82	82.609	ENSGAGG00000014132	-	95	74.684	Gopherus_agassizii
ENSCPBG00000001985	-	94	84.810	ENSGAGG00000022991	-	92	84.810	Gopherus_agassizii
ENSCPBG00000001985	-	74	91.935	ENSGAGG00000020974	-	52	91.935	Gopherus_agassizii
ENSCPBG00000001985	-	98	69.048	ENSGGOG00000039936	-	95	69.048	Gorilla_gorilla
ENSCPBG00000001985	-	94	68.354	ENSGGOG00000039564	-	96	68.354	Gorilla_gorilla
ENSCPBG00000001985	-	89	90.667	ENSGGOG00000001127	-	100	88.372	Gorilla_gorilla
ENSCPBG00000001985	-	89	90.667	ENSHGLG00000009108	SNRPF	100	88.372	Heterocephalus_glaber_female
ENSCPBG00000001985	-	89	89.333	ENSHGLG00000021172	-	100	87.209	Heterocephalus_glaber_female
ENSCPBG00000001985	-	89	89.333	ENSHGLG00100019596	-	100	87.209	Heterocephalus_glaber_male
ENSCPBG00000001985	-	88	90.541	ENSHGLG00100008103	-	100	88.235	Heterocephalus_glaber_male
ENSCPBG00000001985	-	74	78.261	ENSHCOG00000018663	snrpf	54	78.261	Hippocampus_comes
ENSCPBG00000001985	-	89	88.000	ENSIPUG00000018994	snrpf	100	86.047	Ictalurus_punctatus
ENSCPBG00000001985	-	89	90.667	ENSSTOG00000010434	-	100	88.372	Ictidomys_tridecemlineatus
ENSCPBG00000001985	-	89	90.667	ENSJJAG00000011272	-	100	88.372	Jaculus_jaculus
ENSCPBG00000001985	-	100	77.381	ENSJJAG00000010502	-	100	77.381	Jaculus_jaculus
ENSCPBG00000001985	-	77	89.231	ENSJJAG00000004828	-	100	89.231	Jaculus_jaculus
ENSCPBG00000001985	-	100	78.571	ENSJJAG00000004558	-	100	78.571	Jaculus_jaculus
ENSCPBG00000001985	-	89	86.667	ENSKMAG00000013566	snrpf	100	84.884	Kryptolebias_marmoratus
ENSCPBG00000001985	-	89	86.667	ENSLBEG00000008800	snrpf	100	84.884	Labrus_bergylta
ENSCPBG00000001985	-	89	89.333	ENSLACG00000002456	-	74	87.209	Latimeria_chalumnae
ENSCPBG00000001985	-	89	85.333	ENSLOCG00000015744	snrpf	100	83.721	Lepisosteus_oculatus
ENSCPBG00000001985	-	88	90.541	ENSLAFG00000017426	SNRPF	99	88.235	Loxodonta_africana
ENSCPBG00000001985	-	87	86.301	ENSMAMG00000016593	snrpf	99	84.524	Mastacembelus_armatus
ENSCPBG00000001985	-	87	87.671	ENSMZEG00005014701	snrpf	99	85.714	Maylandia_zebra
ENSCPBG00000001985	-	87	90.411	ENSMGAG00000011453	-	76	88.095	Meleagris_gallopavo
ENSCPBG00000001985	-	96	71.605	ENSMAUG00000010289	-	96	71.605	Mesocricetus_auratus
ENSCPBG00000001985	-	75	90.476	ENSMAUG00000019737	-	100	87.838	Mesocricetus_auratus
ENSCPBG00000001985	-	75	90.476	ENSMAUG00000016909	-	100	87.838	Mesocricetus_auratus
ENSCPBG00000001985	-	89	85.333	ENSMAUG00000008799	-	100	83.721	Mesocricetus_auratus
ENSCPBG00000001985	-	89	84.000	ENSMICG00000030494	-	69	82.558	Microcebus_murinus
ENSCPBG00000001985	-	89	90.667	ENSMICG00000012153	-	100	88.372	Microcebus_murinus
ENSCPBG00000001985	-	81	75.000	ENSMOCG00000020220	-	100	75.641	Microtus_ochrogaster
ENSCPBG00000001985	-	89	90.667	ENSMOCG00000020437	Snrpf	100	88.372	Microtus_ochrogaster
ENSCPBG00000001985	-	89	77.333	ENSMOCG00000022166	-	90	78.049	Microtus_ochrogaster
ENSCPBG00000001985	-	88	87.838	ENSMMOG00000007127	snrpf	100	85.882	Mola_mola
ENSCPBG00000001985	-	89	90.667	ENSMODG00000008091	SNRPF	75	88.372	Monodelphis_domestica
ENSCPBG00000001985	-	87	87.671	ENSMALG00000012328	snrpf	99	85.714	Monopterus_albus
ENSCPBG00000001985	-	89	90.667	MGP_CAROLIEiJ_G0015735	-	100	88.372	Mus_caroli
ENSCPBG00000001985	-	89	90.667	ENSMUSG00000020018	Snrpf	100	88.372	Mus_musculus
ENSCPBG00000001985	-	89	90.667	MGP_PahariEiJ_G0031350	Snrpf	100	88.372	Mus_pahari
ENSCPBG00000001985	-	89	90.667	MGP_SPRETEiJ_G0016553	Snrpf	100	88.372	Mus_spretus
ENSCPBG00000001985	-	89	90.667	ENSMPUG00000007176	-	77	88.372	Mustela_putorius_furo
ENSCPBG00000001985	-	88	90.541	ENSMLUG00000013577	-	100	88.235	Myotis_lucifugus
ENSCPBG00000001985	-	89	90.667	ENSMLUG00000027932	-	81	88.372	Myotis_lucifugus
ENSCPBG00000001985	-	89	90.667	ENSMLUG00000029201	-	81	88.372	Myotis_lucifugus
ENSCPBG00000001985	-	89	90.667	ENSMLUG00000026149	-	81	88.372	Myotis_lucifugus
ENSCPBG00000001985	-	100	69.767	ENSMLUG00000026269	-	81	69.767	Myotis_lucifugus
ENSCPBG00000001985	-	89	90.667	ENSNGAG00000024292	-	100	88.372	Nannospalax_galili
ENSCPBG00000001985	-	75	82.540	ENSNGAG00000005851	-	74	82.540	Nannospalax_galili
ENSCPBG00000001985	-	88	87.838	ENSNBRG00000011682	snrpf	87	85.882	Neolamprologus_brichardi
ENSCPBG00000001985	-	88	63.514	ENSMEUG00000000671	SNRPF	100	64.706	Notamacropus_eugenii
ENSCPBG00000001985	-	89	90.667	ENSODEG00000010328	-	100	88.372	Octodon_degus
ENSCPBG00000001985	-	89	89.333	ENSOCUG00000010925	SNRPF	76	87.209	Oryctolagus_cuniculus
ENSCPBG00000001985	-	88	86.486	ENSORLG00020008216	snrpf	100	84.706	Oryzias_latipes_hni
ENSCPBG00000001985	-	88	86.486	ENSORLG00015007418	snrpf	100	84.706	Oryzias_latipes_hsok
ENSCPBG00000001985	-	87	86.301	ENSOMEG00000003018	snrpf	99	84.524	Oryzias_melastigma
ENSCPBG00000001985	-	89	89.333	ENSOGAG00000030323	-	100	86.047	Otolemur_garnettii
ENSCPBG00000001985	-	89	90.667	ENSOARG00000011853	-	75	88.372	Ovis_aries
ENSCPBG00000001985	-	94	68.354	ENSPPAG00000037479	-	96	68.354	Pan_paniscus
ENSCPBG00000001985	-	98	69.048	ENSPPAG00000037544	-	95	69.048	Pan_paniscus
ENSCPBG00000001985	-	98	69.048	ENSPPRG00000007449	-	86	69.048	Panthera_pardus
ENSCPBG00000001985	-	89	90.667	ENSPPRG00000005875	-	100	88.372	Panthera_pardus
ENSCPBG00000001985	-	89	90.667	ENSPTIG00000007520	SNRPF	100	88.372	Panthera_tigris_altaica
ENSCPBG00000001985	-	98	69.048	ENSPTIG00000005117	-	100	69.048	Panthera_tigris_altaica
ENSCPBG00000001985	-	94	68.354	ENSPTRG00000047717	-	96	68.354	Pan_troglodytes
ENSCPBG00000001985	-	98	69.048	ENSPTRG00000043814	-	95	69.048	Pan_troglodytes
ENSCPBG00000001985	-	88	87.838	ENSPKIG00000014784	snrpf	93	85.882	Paramormyrops_kingsleyae
ENSCPBG00000001985	-	88	90.541	ENSPSIG00000016462	SNRPF	99	88.235	Pelodiscus_sinensis
ENSCPBG00000001985	-	88	87.838	ENSPMGG00000023548	snrpf	100	85.882	Periophthalmus_magnuspinnatus
ENSCPBG00000001985	-	89	90.667	ENSPEMG00000023326	Snrpf	100	88.372	Peromyscus_maniculatus_bairdii
ENSCPBG00000001985	-	87	87.671	ENSPLAG00000023932	snrpf	99	85.714	Poecilia_latipinna
ENSCPBG00000001985	-	87	87.671	ENSPMEG00000003377	snrpf	99	85.714	Poecilia_mexicana
ENSCPBG00000001985	-	87	87.671	ENSPREG00000022635	snrpf	97	85.714	Poecilia_reticulata
ENSCPBG00000001985	-	89	90.667	ENSPPYG00000004847	-	100	88.372	Pongo_abelii
ENSCPBG00000001985	-	89	90.667	ENSPCOG00000023833	-	100	88.372	Propithecus_coquereli
ENSCPBG00000001985	-	89	90.667	ENSPVAG00000009036	SNRPF	100	88.372	Pteropus_vampyrus
ENSCPBG00000001985	-	87	87.671	ENSPNYG00000021712	snrpf	99	85.714	Pundamilia_nyererei
ENSCPBG00000001985	-	87	86.301	ENSPNAG00000019117	snrpf	99	84.524	Pygocentrus_nattereri
ENSCPBG00000001985	-	89	90.667	ENSRNOG00000005556	Snrpf	100	88.372	Rattus_norvegicus
ENSCPBG00000001985	-	89	88.000	ENSRBIG00000030414	-	100	84.884	Rhinopithecus_bieti
ENSCPBG00000001985	-	89	88.000	ENSRROG00000021975	-	100	84.884	Rhinopithecus_roxellana
ENSCPBG00000001985	-	83	53.521	YPR182W	SMX3	83	53.521	Saccharomyces_cerevisiae
ENSCPBG00000001985	-	89	74.359	ENSSBOG00000027638	-	100	74.157	Saimiri_boliviensis_boliviensis
ENSCPBG00000001985	-	89	90.667	ENSSBOG00000036179	-	100	88.372	Saimiri_boliviensis_boliviensis
ENSCPBG00000001985	-	89	90.667	ENSSBOG00000012868	-	100	88.372	Saimiri_boliviensis_boliviensis
ENSCPBG00000001985	-	89	77.333	ENSSBOG00000032297	-	100	76.744	Saimiri_boliviensis_boliviensis
ENSCPBG00000001985	-	88	90.541	ENSSHAG00000012294	SNRPF	77	88.235	Sarcophilus_harrisii
ENSCPBG00000001985	-	75	88.889	ENSSFOG00015021523	snrpf	94	88.889	Scleropages_formosus
ENSCPBG00000001985	-	89	85.333	ENSSMAG00000005533	snrpf	99	83.721	Scophthalmus_maximus
ENSCPBG00000001985	-	76	89.062	ENSSDUG00000016283	snrpf	76	89.062	Seriola_dumerili
ENSCPBG00000001985	-	89	86.667	ENSSLDG00000005119	snrpf	100	84.884	Seriola_lalandi_dorsalis
ENSCPBG00000001985	-	95	67.500	ENSSLDG00000003885	-	98	67.500	Seriola_lalandi_dorsalis
ENSCPBG00000001985	-	87	90.411	ENSSPUG00000014590	-	99	88.095	Sphenodon_punctatus
ENSCPBG00000001985	-	88	87.838	ENSSPAG00000003283	snrpf	97	85.882	Stegastes_partitus
ENSCPBG00000001985	-	89	90.667	ENSSSCG00000000895	SNRPF	100	88.372	Sus_scrofa
ENSCPBG00000001985	-	68	87.719	ENSTRUG00000014956	snrpf	99	85.294	Takifugu_rubripes
ENSCPBG00000001985	-	89	86.667	ENSTNIG00000012672	snrpf	100	84.884	Tetraodon_nigroviridis
ENSCPBG00000001985	-	89	64.000	ENSTTRG00000006070	SNRPF	100	65.116	Tursiops_truncatus
ENSCPBG00000001985	-	89	90.667	ENSUAMG00000008176	-	100	88.372	Ursus_americanus
ENSCPBG00000001985	-	100	77.647	ENSUAMG00000001101	-	100	77.647	Ursus_americanus
ENSCPBG00000001985	-	89	80.000	ENSUMAG00000006177	-	100	76.471	Ursus_maritimus
ENSCPBG00000001985	-	89	90.667	ENSUMAG00000003528	-	100	88.372	Ursus_maritimus
ENSCPBG00000001985	-	89	90.667	ENSVPAG00000008712	-	100	88.372	Vicugna_pacos
ENSCPBG00000001985	-	93	84.615	ENSVVUG00000023821	-	100	84.615	Vulpes_vulpes
ENSCPBG00000001985	-	88	67.105	ENSXETG00000021630	snrpf	100	67.816	Xenopus_tropicalis
ENSCPBG00000001985	-	87	87.671	ENSXCOG00000013860	snrpf	97	85.714	Xiphophorus_couchianus
ENSCPBG00000001985	-	87	87.671	ENSXMAG00000015448	snrpf	99	85.714	Xiphophorus_maculatus