EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000002014 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 6637 bases
Position: chrKK083204.1:73810-80446
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000002538	zf-C2H2	PF00096.26	1.8e-44	1	8
ENSCPBP00000002538	zf-C2H2	PF00096.26	1.8e-44	2	8
ENSCPBP00000002538	zf-C2H2	PF00096.26	1.8e-44	3	8
ENSCPBP00000002538	zf-C2H2	PF00096.26	1.8e-44	4	8
ENSCPBP00000002538	zf-C2H2	PF00096.26	1.8e-44	5	8
ENSCPBP00000002538	zf-C2H2	PF00096.26	1.8e-44	6	8
ENSCPBP00000002538	zf-C2H2	PF00096.26	1.8e-44	7	8
ENSCPBP00000002538	zf-C2H2	PF00096.26	1.8e-44	8	8
ENSCPBP00000002529	zf-C2H2	PF00096.26	8.2e-38	1	6
ENSCPBP00000002529	zf-C2H2	PF00096.26	8.2e-38	2	6
ENSCPBP00000002529	zf-C2H2	PF00096.26	8.2e-38	3	6
ENSCPBP00000002529	zf-C2H2	PF00096.26	8.2e-38	4	6
ENSCPBP00000002529	zf-C2H2	PF00096.26	8.2e-38	5	6
ENSCPBP00000002529	zf-C2H2	PF00096.26	8.2e-38	6	6
ENSCPBP00000002538	zf-met	PF12874.7	1.6e-06	1	2
ENSCPBP00000002538	zf-met	PF12874.7	1.6e-06	2	2
ENSCPBP00000002529	zf-met	PF12874.7	8.8e-06	1	2
ENSCPBP00000002529	zf-met	PF12874.7	8.8e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000003090	-	1293	-	ENSCPBP00000002529	430 (aa)	-	-
ENSCPBT00000003101	-	1353	-	ENSCPBP00000002538	450 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000002014's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000002014's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000002014	-	70	60.550	ENSCPBG00000004990	-	100	57.754
ENSCPBG00000002014	-	61	40.146	ENSCPBG00000024735	PRDM5	81	40.146
ENSCPBG00000002014	-	60	61.379	ENSCPBG00000001181	-	99	61.379
ENSCPBG00000002014	-	51	70.312	ENSCPBG00000002063	-	56	70.312
ENSCPBG00000002014	-	56	53.646	ENSCPBG00000005703	-	50	55.251
ENSCPBG00000002014	-	58	49.770	ENSCPBG00000021487	-	64	51.579
ENSCPBG00000002014	-	63	57.955	ENSCPBG00000021479	-	91	55.372
ENSCPBG00000002014	-	56	54.487	ENSCPBG00000001258	-	91	54.487
ENSCPBG00000002014	-	59	60.550	ENSCPBG00000003130	-	96	60.550
ENSCPBG00000002014	-	67	52.511	ENSCPBG00000005586	-	76	52.511
ENSCPBG00000002014	-	67	54.922	ENSCPBG00000002430	-	91	54.922
ENSCPBG00000002014	-	56	45.946	ENSCPBG00000013652	-	68	47.771
ENSCPBG00000002014	-	70	59.111	ENSCPBG00000012976	-	98	59.052
ENSCPBG00000002014	-	66	55.405	ENSCPBG00000001421	-	99	57.078
ENSCPBG00000002014	-	69	55.455	ENSCPBG00000003774	-	89	55.135
ENSCPBG00000002014	-	69	55.172	ENSCPBG00000026433	-	74	55.172
ENSCPBG00000002014	-	50	42.273	ENSCPBG00000004542	ZNF865	83	42.273
ENSCPBG00000002014	-	51	49.242	ENSCPBG00000001526	-	79	49.242
ENSCPBG00000002014	-	50	53.488	ENSCPBG00000009849	-	83	51.111
ENSCPBG00000002014	-	61	56.621	ENSCPBG00000015500	-	92	57.727
ENSCPBG00000002014	-	66	51.145	ENSCPBG00000009609	-	94	52.489
ENSCPBG00000002014	-	68	55.909	ENSCPBG00000017494	-	84	55.505
ENSCPBG00000002014	-	66	42.396	ENSCPBG00000026947	ZNF319	93	42.396
ENSCPBG00000002014	-	53	42.574	ENSCPBG00000023418	-	53	43.523
ENSCPBG00000002014	-	62	58.744	ENSCPBG00000016841	-	96	54.430
ENSCPBG00000002014	-	70	59.174	ENSCPBG00000001272	-	84	59.174
ENSCPBG00000002014	-	69	39.015	ENSCPBG00000008580	-	75	61.702
ENSCPBG00000002014	-	67	52.632	ENSCPBG00000017489	-	95	56.164
ENSCPBG00000002014	-	59	54.348	ENSCPBG00000015987	-	87	51.007
ENSCPBG00000002014	-	50	46.591	ENSCPBG00000005715	ZBTB49	51	46.471
ENSCPBG00000002014	-	62	59.633	ENSCPBG00000004030	-	82	57.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000002014	-	58	51.471	ENSAMXG00000003002	-	96	51.832	Astyanax_mexicanus
ENSCPBG00000002014	-	51	54.128	ENSAMXG00000011804	-	85	54.128	Astyanax_mexicanus
ENSCPBG00000002014	-	60	55.140	ENSAMXG00000038453	-	82	55.140	Astyanax_mexicanus
ENSCPBG00000002014	-	59	49.784	ENSAMXG00000037143	-	96	55.172	Astyanax_mexicanus
ENSCPBG00000002014	-	50	51.402	ENSAMXG00000032619	-	97	51.402	Astyanax_mexicanus
ENSCPBG00000002014	-	68	51.376	ENSAMXG00000043978	-	97	51.376	Astyanax_mexicanus
ENSCPBG00000002014	-	60	57.798	ENSAMXG00000026142	-	93	57.798	Astyanax_mexicanus
ENSCPBG00000002014	-	62	48.846	ENSAMXG00000026144	-	91	54.450	Astyanax_mexicanus
ENSCPBG00000002014	-	58	54.054	ENSAMXG00000031489	-	95	53.922	Astyanax_mexicanus
ENSCPBG00000002014	-	64	53.182	ENSAMXG00000040212	-	88	53.182	Astyanax_mexicanus
ENSCPBG00000002014	-	52	52.752	ENSAMXG00000041725	-	93	52.752	Astyanax_mexicanus
ENSCPBG00000002014	-	54	55.676	ENSAMXG00000037703	-	92	55.046	Astyanax_mexicanus
ENSCPBG00000002014	-	51	52.899	ENSAMXG00000037326	-	92	52.899	Astyanax_mexicanus
ENSCPBG00000002014	-	59	58.716	ENSEASG00005020341	-	94	58.716	Equus_asinus_asinus
ENSCPBG00000002014	-	59	58.716	ENSECAG00000017293	-	95	58.716	Equus_caballus
ENSCPBG00000002014	-	68	58.289	ENSGAGG00000004740	-	94	60.000	Gopherus_agassizii
ENSCPBG00000002014	-	62	57.727	ENSGAGG00000006683	-	94	64.072	Gopherus_agassizii
ENSCPBG00000002014	-	56	57.534	ENSGAGG00000008773	-	90	57.534	Gopherus_agassizii
ENSCPBG00000002014	-	61	54.595	ENSGAGG00000011574	-	82	56.132	Gopherus_agassizii
ENSCPBG00000002014	-	55	59.545	ENSGAGG00000006960	-	87	59.545	Gopherus_agassizii
ENSCPBG00000002014	-	59	59.346	ENSGAGG00000019349	-	77	59.346	Gopherus_agassizii
ENSCPBG00000002014	-	58	57.746	ENSGAGG00000015451	-	82	57.746	Gopherus_agassizii
ENSCPBG00000002014	-	64	56.442	ENSGAGG00000017986	-	94	59.091	Gopherus_agassizii
ENSCPBG00000002014	-	58	53.165	ENSIPUG00000015177	-	72	53.165	Ictalurus_punctatus
ENSCPBG00000002014	-	62	56.422	ENSIPUG00000015400	-	95	55.435	Ictalurus_punctatus
ENSCPBG00000002014	-	51	55.963	ENSMPUG00000008437	-	87	55.963	Mustela_putorius_furo
ENSCPBG00000002014	-	58	57.273	ENSPTIG00000009259	-	96	57.273	Panthera_tigris_altaica
ENSCPBG00000002014	-	70	77.931	ENSPSIG00000016247	-	80	77.931	Pelodiscus_sinensis
ENSCPBG00000002014	-	58	50.667	ENSPNAG00000008653	-	96	55.000	Pygocentrus_nattereri
ENSCPBG00000002014	-	64	55.000	ENSPNAG00000002287	-	87	55.000	Pygocentrus_nattereri
ENSCPBG00000002014	-	58	54.974	ENSPNAG00000018437	-	74	55.909	Pygocentrus_nattereri
ENSCPBG00000002014	-	62	59.174	ENSPNAG00000003526	-	82	59.174	Pygocentrus_nattereri
ENSCPBG00000002014	-	60	57.339	ENSPNAG00000005914	-	73	57.339	Pygocentrus_nattereri
ENSCPBG00000002014	-	58	58.511	ENSPNAG00000016045	-	85	56.915	Pygocentrus_nattereri
ENSCPBG00000002014	-	50	54.167	ENSPNAG00000021942	-	91	51.364	Pygocentrus_nattereri
ENSCPBG00000002014	-	62	52.752	ENSPNAG00000024704	-	88	52.752	Pygocentrus_nattereri
ENSCPBG00000002014	-	55	51.464	ENSPNAG00000000783	-	94	51.485	Pygocentrus_nattereri
ENSCPBG00000002014	-	59	54.128	ENSPNAG00000028765	-	94	54.128	Pygocentrus_nattereri
ENSCPBG00000002014	-	58	53.556	ENSPNAG00000012366	-	87	53.556	Pygocentrus_nattereri
ENSCPBG00000002014	-	51	53.774	ENSPNAG00000012138	-	92	53.774	Pygocentrus_nattereri
ENSCPBG00000002014	-	54	53.514	ENSPNAG00000003919	-	91	54.412	Pygocentrus_nattereri
ENSCPBG00000002014	-	54	52.284	ENSUAMG00000027415	-	89	52.284	Ursus_americanus
ENSCPBG00000002014	-	60	55.963	ENSUAMG00000027384	-	87	55.505	Ursus_americanus