EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000002063 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 6451 bases
Position: chrKK083204.1:120885-127335
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000002586	zf-C2H2	PF00096.26	3.8e-41	1	6
ENSCPBP00000002586	zf-C2H2	PF00096.26	3.8e-41	2	6
ENSCPBP00000002586	zf-C2H2	PF00096.26	3.8e-41	3	6
ENSCPBP00000002586	zf-C2H2	PF00096.26	3.8e-41	4	6
ENSCPBP00000002586	zf-C2H2	PF00096.26	3.8e-41	5	6
ENSCPBP00000002586	zf-C2H2	PF00096.26	3.8e-41	6	6
ENSCPBP00000002586	zf-met	PF12874.7	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000003158	-	1077	-	ENSCPBP00000002586	358 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000002063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000002063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000002063	-	54	53.125	ENSCPBG00000021487	-	69	53.125
ENSCPBG00000002063	-	57	46.734	ENSCPBG00000008580	-	78	46.734
ENSCPBG00000002063	-	58	55.357	ENSCPBG00000001258	-	99	55.357
ENSCPBG00000002063	-	61	54.676	ENSCPBG00000026433	-	54	54.676
ENSCPBG00000002063	-	54	52.000	ENSCPBG00000009849	-	81	52.000
ENSCPBG00000002063	-	87	56.805	ENSCPBG00000002430	-	95	56.805
ENSCPBG00000002063	-	58	53.684	ENSCPBG00000015987	-	62	53.684
ENSCPBG00000002063	-	65	59.124	ENSCPBG00000001272	-	72	59.124
ENSCPBG00000002063	-	72	57.527	ENSCPBG00000017494	-	85	57.527
ENSCPBG00000002063	-	66	55.330	ENSCPBG00000009609	-	90	55.330
ENSCPBG00000002063	-	68	54.124	ENSCPBG00000005703	-	64	54.124
ENSCPBG00000002063	-	94	52.033	ENSCPBG00000012976	-	95	56.701
ENSCPBG00000002063	-	55	42.857	ENSCPBG00000013652	-	67	42.857
ENSCPBG00000002063	-	78	58.421	ENSCPBG00000004990	-	100	56.281
ENSCPBG00000002063	-	75	55.263	ENSCPBG00000017489	-	94	55.263
ENSCPBG00000002063	-	71	57.436	ENSCPBG00000016841	-	91	57.436
ENSCPBG00000002063	-	61	59.067	ENSCPBG00000003130	-	96	59.067
ENSCPBG00000002063	-	56	46.988	ENSCPBG00000026947	ZNF319	95	46.988
ENSCPBG00000002063	-	70	47.368	ENSCPBG00000001526	-	83	47.368
ENSCPBG00000002063	-	69	60.104	ENSCPBG00000001181	-	99	60.104
ENSCPBG00000002063	-	61	60.606	ENSCPBG00000001421	-	98	57.216
ENSCPBG00000002063	-	56	70.312	ENSCPBG00000002014	-	51	70.312
ENSCPBG00000002063	-	67	55.670	ENSCPBG00000003774	-	94	55.670
ENSCPBG00000002063	-	65	58.247	ENSCPBG00000015500	-	93	56.701
ENSCPBG00000002063	-	72	57.812	ENSCPBG00000021479	-	90	57.812
ENSCPBG00000002063	-	58	47.619	ENSCPBG00000004542	ZNF865	78	44.974
ENSCPBG00000002063	-	82	52.792	ENSCPBG00000004030	-	98	52.792
ENSCPBG00000002063	-	65	52.308	ENSCPBG00000005586	-	67	52.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000002063	-	79	37.895	ENSACIG00000017013	-	75	37.895	Amphilophus_citrinellus
ENSCPBG00000002063	-	55	53.293	ENSAMXG00000035683	-	97	53.293	Astyanax_mexicanus
ENSCPBG00000002063	-	58	48.980	ENSGAGG00000017640	-	64	48.980	Gopherus_agassizii
ENSCPBG00000002063	-	78	50.877	ENSGAGG00000005331	-	95	50.877	Gopherus_agassizii
ENSCPBG00000002063	-	54	45.596	ENSHCOG00000001292	-	59	45.596	Hippocampus_comes
ENSCPBG00000002063	-	55	46.629	ENSHCOG00000014786	-	94	46.629	Hippocampus_comes
ENSCPBG00000002063	-	54	52.023	ENSIPUG00000015203	-	63	52.023	Ictalurus_punctatus
ENSCPBG00000002063	-	62	51.977	ENSIPUG00000015601	-	68	51.977	Ictalurus_punctatus
ENSCPBG00000002063	-	61	58.896	ENSIPUG00000015294	-	62	58.896	Ictalurus_punctatus
ENSCPBG00000002063	-	56	48.168	ENSORLG00020001707	-	76	48.168	Oryzias_latipes_hni
ENSCPBG00000002063	-	63	55.714	ENSPCIG00000019333	-	96	55.714	Phascolarctos_cinereus
ENSCPBG00000002063	-	58	53.125	ENSPFOG00000024567	-	99	53.125	Poecilia_formosa
ENSCPBG00000002063	-	55	45.181	ENSPFOG00000011209	-	51	45.181	Poecilia_formosa
ENSCPBG00000002063	-	55	48.507	ENSPMEG00000016762	-	80	48.507	Poecilia_mexicana
ENSCPBG00000002063	-	55	50.299	ENSPNAG00000009741	-	59	50.299	Pygocentrus_nattereri
ENSCPBG00000002063	-	63	46.696	ENSPNAG00000008491	-	83	46.696	Pygocentrus_nattereri
ENSCPBG00000002063	-	54	52.023	ENSPNAG00000018409	-	80	52.023	Pygocentrus_nattereri