EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000002173 (Gene tree)
Gene ID: 101932981
Gene Symbol: LARP1
Alias: KIAA0731|LARP|MGC19556
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 74851 bases
Position: chrKK082955.1:2567108-2641958
Accession: 29531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000002724	La	PF05383.17	9.4e-21	1	1
ENSCPBP00000002712	La	PF05383.17	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000003304	LARP1-201	3510	-	ENSCPBP00000002712	1050 (aa)	-	-
ENSCPBT00000003317	LARP1-202	3002	-	ENSCPBP00000002724	988 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000002173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000002173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000002173	LARP1	90	63.676	ENSCPBG00000017480	LARP1B	90	63.494

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000002173	LARP1	98	78.607	ENSG00000155506	LARP1	89	93.210	Homo_sapiens
ENSCPBG00000002173	LARP1	80	84.305	ENSAPOG00000020685	larp1	89	85.981	Acanthochromis_polyacanthus
ENSCPBG00000002173	LARP1	94	81.120	ENSAMEG00000016673	LARP1	100	81.244	Ailuropoda_melanoleuca
ENSCPBG00000002173	LARP1	94	68.703	ENSACIG00000012994	larp1	89	68.275	Amphilophus_citrinellus
ENSCPBG00000002173	LARP1	81	74.528	ENSAOCG00000007792	larp1	96	75.946	Amphiprion_ocellaris
ENSCPBG00000002173	LARP1	92	72.766	ENSAPEG00000022246	larp1	89	74.381	Amphiprion_percula
ENSCPBG00000002173	LARP1	91	70.681	ENSATEG00000013523	larp1	87	72.794	Anabas_testudineus
ENSCPBG00000002173	LARP1	87	92.727	ENSAPLG00000007559	LARP1	99	92.947	Anas_platyrhynchos
ENSCPBG00000002173	LARP1	94	87.564	ENSACAG00000004071	LARP1	100	89.741	Anolis_carolinensis
ENSCPBG00000002173	LARP1	98	78.827	ENSANAG00000029949	LARP1	100	77.870	Aotus_nancymaae
ENSCPBG00000002173	LARP1	93	72.112	ENSACLG00000015256	larp1	99	70.889	Astatotilapia_calliptera
ENSCPBG00000002173	LARP1	92	73.953	ENSAMXG00000000859	larp1	93	73.647	Astyanax_mexicanus
ENSCPBG00000002173	LARP1	100	76.160	ENSBTAG00000008443	LARP1	96	77.778	Bos_taurus
ENSCPBG00000002173	LARP1	98	78.926	ENSCJAG00000004454	LARP1	98	78.635	Callithrix_jacchus
ENSCPBG00000002173	LARP1	94	81.205	ENSCAFG00000017639	LARP1	100	81.205	Canis_familiaris
ENSCPBG00000002173	LARP1	88	81.506	ENSCAFG00020023860	LARP1	100	81.506	Canis_lupus_dingo
ENSCPBG00000002173	LARP1	100	75.479	ENSCHIG00000014414	LARP1	96	75.640	Capra_hircus
ENSCPBG00000002173	LARP1	99	78.508	ENSTSYG00000013732	LARP1	99	78.854	Carlito_syrichta
ENSCPBG00000002173	LARP1	81	81.459	ENSCAPG00000013865	LARP1	86	81.495	Cavia_aperea
ENSCPBG00000002173	LARP1	94	81.497	ENSCPOG00000003377	LARP1	100	81.497	Cavia_porcellus
ENSCPBG00000002173	LARP1	99	78.051	ENSCCAG00000025201	LARP1	99	78.051	Cebus_capucinus
ENSCPBG00000002173	LARP1	98	78.728	ENSCATG00000030675	LARP1	95	80.576	Cercocebus_atys
ENSCPBG00000002173	LARP1	94	81.573	ENSCLAG00000012755	LARP1	99	79.647	Chinchilla_lanigera
ENSCPBG00000002173	LARP1	88	78.556	ENSCSAG00000010800	LARP1	100	78.556	Chlorocebus_sabaeus
ENSCPBG00000002173	LARP1	85	75.988	ENSCHOG00000012716	LARP1	91	75.882	Choloepus_hoffmanni
ENSCPBG00000002173	LARP1	98	78.827	ENSCANG00000037418	LARP1	97	78.827	Colobus_angolensis_palliatus
ENSCPBG00000002173	LARP1	94	80.997	ENSCGRG00001016913	Larp1	96	76.612	Cricetulus_griseus_chok1gshd
ENSCPBG00000002173	LARP1	90	79.303	ENSCGRG00000009916	Larp1	99	79.303	Cricetulus_griseus_crigri
ENSCPBG00000002173	LARP1	92	72.718	ENSCSEG00000016431	larp1	88	73.306	Cynoglossus_semilaevis
ENSCPBG00000002173	LARP1	91	72.322	ENSCVAG00000022687	larp1	87	73.250	Cyprinodon_variegatus
ENSCPBG00000002173	LARP1	93	68.872	ENSDARG00000101722	larp1	93	69.645	Danio_rerio
ENSCPBG00000002173	LARP1	100	75.431	ENSDNOG00000012073	LARP1	96	77.422	Dasypus_novemcinctus
ENSCPBG00000002173	LARP1	94	78.898	ENSDORG00000002897	Larp1	99	79.106	Dipodomys_ordii
ENSCPBG00000002173	LARP1	86	83.541	ENSETEG00000020251	LARP1	100	83.541	Echinops_telfairi
ENSCPBG00000002173	LARP1	94	80.997	ENSEASG00005001070	LARP1	96	77.350	Equus_asinus_asinus
ENSCPBG00000002173	LARP1	94	80.997	ENSECAG00000017002	LARP1	75	79.352	Equus_caballus
ENSCPBG00000002173	LARP1	92	76.939	ENSEEUG00000001065	LARP1	100	77.258	Erinaceus_europaeus
ENSCPBG00000002173	LARP1	98	68.662	ENSELUG00000019403	larp1	94	69.981	Esox_lucius
ENSCPBG00000002173	LARP1	94	81.412	ENSFCAG00000000592	LARP1	98	77.131	Felis_catus
ENSCPBG00000002173	LARP1	83	92.421	ENSFALG00000008335	LARP1	100	93.032	Ficedula_albicollis
ENSCPBG00000002173	LARP1	94	81.270	ENSFDAG00000021125	LARP1	100	81.270	Fukomys_damarensis
ENSCPBG00000002173	LARP1	55	65.825	ENSFHEG00000020307	larp1	92	69.207	Fundulus_heteroclitus
ENSCPBG00000002173	LARP1	94	93.441	ENSGALG00000040109	LARP1	97	90.944	Gallus_gallus
ENSCPBG00000002173	LARP1	100	96.711	ENSGAGG00000025113	LARP1	99	98.309	Gopherus_agassizii
ENSCPBG00000002173	LARP1	98	78.607	ENSGGOG00000006048	LARP1	97	78.728	Gorilla_gorilla
ENSCPBG00000002173	LARP1	93	72.594	ENSHBUG00000020762	larp1	98	73.434	Haplochromis_burtoni
ENSCPBG00000002173	LARP1	92	81.316	ENSHGLG00000006267	LARP1	91	79.479	Heterocephalus_glaber_female
ENSCPBG00000002173	LARP1	95	67.425	ENSHGLG00100003395	-	88	69.075	Heterocephalus_glaber_male
ENSCPBG00000002173	LARP1	94	81.289	ENSHGLG00100014230	-	100	81.289	Heterocephalus_glaber_male
ENSCPBG00000002173	LARP1	85	83.750	ENSHCOG00000010786	larp1	88	84.772	Hippocampus_comes
ENSCPBG00000002173	LARP1	90	71.173	ENSIPUG00000019105	Larp1	93	71.197	Ictalurus_punctatus
ENSCPBG00000002173	LARP1	94	79.002	ENSSTOG00000005678	LARP1	99	79.002	Ictidomys_tridecemlineatus
ENSCPBG00000002173	LARP1	94	76.562	ENSJJAG00000016950	Larp1	93	76.737	Jaculus_jaculus
ENSCPBG00000002173	LARP1	96	69.761	ENSKMAG00000018468	larp1	95	72.766	Kryptolebias_marmoratus
ENSCPBG00000002173	LARP1	95	70.978	ENSLBEG00000027172	larp1	90	71.782	Labrus_bergylta
ENSCPBG00000002173	LARP1	87	80.185	ENSLOCG00000012457	larp1	94	79.777	Lepisosteus_oculatus
ENSCPBG00000002173	LARP1	97	77.286	ENSLAFG00000008991	LARP1	96	77.358	Loxodonta_africana
ENSCPBG00000002173	LARP1	98	78.429	ENSMFAG00000031651	LARP1	97	78.429	Macaca_fascicularis
ENSCPBG00000002173	LARP1	94	78.333	ENSMMUG00000009411	LARP1	99	78.333	Macaca_mulatta
ENSCPBG00000002173	LARP1	91	80.086	ENSMNEG00000039294	LARP1	100	80.910	Macaca_nemestrina
ENSCPBG00000002173	LARP1	98	78.827	ENSMLEG00000035142	LARP1	97	78.827	Mandrillus_leucophaeus
ENSCPBG00000002173	LARP1	91	73.207	ENSMAMG00000021788	larp1	88	73.899	Mastacembelus_armatus
ENSCPBG00000002173	LARP1	93	72.112	ENSMZEG00005009345	larp1	99	70.889	Maylandia_zebra
ENSCPBG00000002173	LARP1	94	92.217	ENSMGAG00000005696	LARP1	100	92.537	Meleagris_gallopavo
ENSCPBG00000002173	LARP1	94	80.997	ENSMAUG00000001385	Larp1	96	76.482	Mesocricetus_auratus
ENSCPBG00000002173	LARP1	94	80.062	ENSMICG00000000837	LARP1	99	81.465	Microcebus_murinus
ENSCPBG00000002173	LARP1	94	81.101	ENSMOCG00000008920	Larp1	92	80.584	Microtus_ochrogaster
ENSCPBG00000002173	LARP1	85	58.019	ENSMMOG00000013364	larp1	88	57.652	Mola_mola
ENSCPBG00000002173	LARP1	95	84.304	ENSMODG00000008663	LARP1	100	83.871	Monodelphis_domestica
ENSCPBG00000002173	LARP1	93	71.562	ENSMALG00000017180	larp1	95	71.928	Monopterus_albus
ENSCPBG00000002173	LARP1	94	80.789	MGP_CAROLIEiJ_G0016383	Larp1	92	80.181	Mus_caroli
ENSCPBG00000002173	LARP1	92	81.579	ENSMUSG00000037331	Larp1	95	77.657	Mus_musculus
ENSCPBG00000002173	LARP1	99	76.908	MGP_PahariEiJ_G0017518	Larp1	92	80.020	Mus_pahari
ENSCPBG00000002173	LARP1	97	77.821	MGP_SPRETEiJ_G0017225	Larp1	95	77.657	Mus_spretus
ENSCPBG00000002173	LARP1	81	75.222	ENSMPUG00000013564	LARP1	95	77.093	Mustela_putorius_furo
ENSCPBG00000002173	LARP1	93	78.184	ENSMLUG00000002608	LARP1	100	78.243	Myotis_lucifugus
ENSCPBG00000002173	LARP1	92	78.609	ENSNGAG00000001098	Larp1	98	78.820	Nannospalax_galili
ENSCPBG00000002173	LARP1	90	73.637	ENSNBRG00000008963	larp1	94	73.340	Neolamprologus_brichardi
ENSCPBG00000002173	LARP1	95	79.503	ENSNLEG00000016588	LARP1	99	78.564	Nomascus_leucogenys
ENSCPBG00000002173	LARP1	94	78.201	ENSMEUG00000002957	LARP1	100	77.590	Notamacropus_eugenii
ENSCPBG00000002173	LARP1	94	81.185	ENSOPRG00000013014	LARP1	100	81.185	Ochotona_princeps
ENSCPBG00000002173	LARP1	94	81.497	ENSODEG00000010824	LARP1	100	81.497	Octodon_degus
ENSCPBG00000002173	LARP1	93	72.112	ENSONIG00000017308	larp1	91	71.687	Oreochromis_niloticus
ENSCPBG00000002173	LARP1	95	87.971	ENSOANG00000005096	LARP1	100	86.882	Ornithorhynchus_anatinus
ENSCPBG00000002173	LARP1	99	77.458	ENSOCUG00000013066	LARP1	97	77.428	Oryctolagus_cuniculus
ENSCPBG00000002173	LARP1	93	71.730	ENSORLG00000000824	larp1	96	76.131	Oryzias_latipes
ENSCPBG00000002173	LARP1	93	71.835	ENSORLG00020022241	larp1	88	72.775	Oryzias_latipes_hni
ENSCPBG00000002173	LARP1	93	69.937	ENSORLG00015007538	larp1	89	70.890	Oryzias_latipes_hsok
ENSCPBG00000002173	LARP1	91	70.860	ENSOMEG00000003134	larp1	89	71.099	Oryzias_melastigma
ENSCPBG00000002173	LARP1	94	80.977	ENSOGAG00000016750	LARP1	100	80.769	Otolemur_garnettii
ENSCPBG00000002173	LARP1	94	79.335	ENSOARG00000009893	LARP1	100	79.210	Ovis_aries
ENSCPBG00000002173	LARP1	95	80.576	ENSPPAG00000042993	LARP1	95	80.576	Pan_paniscus
ENSCPBG00000002173	LARP1	96	78.191	ENSPPRG00000009780	LARP1	97	77.465	Panthera_pardus
ENSCPBG00000002173	LARP1	94	79.979	ENSPTIG00000007013	LARP1	94	79.439	Panthera_tigris_altaica
ENSCPBG00000002173	LARP1	95	80.370	ENSPTRG00000017447	LARP1	95	80.370	Pan_troglodytes
ENSCPBG00000002173	LARP1	98	78.728	ENSPANG00000008080	LARP1	95	80.576	Papio_anubis
ENSCPBG00000002173	LARP1	93	67.040	ENSPKIG00000017153	-	92	68.517	Paramormyrops_kingsleyae
ENSCPBG00000002173	LARP1	92	74.356	ENSPKIG00000010096	larp1	87	75.884	Paramormyrops_kingsleyae
ENSCPBG00000002173	LARP1	88	72.014	ENSPMGG00000011599	larp1	93	72.867	Periophthalmus_magnuspinnatus
ENSCPBG00000002173	LARP1	94	78.274	ENSPEMG00000022523	Larp1	99	78.206	Peromyscus_maniculatus_bairdii
ENSCPBG00000002173	LARP1	90	87.417	ENSPCIG00000019242	LARP1	80	87.433	Phascolarctos_cinereus
ENSCPBG00000002173	LARP1	90	71.429	ENSPFOG00000005836	larp1	91	69.505	Poecilia_formosa
ENSCPBG00000002173	LARP1	90	72.384	ENSPLAG00000008936	larp1	91	70.363	Poecilia_latipinna
ENSCPBG00000002173	LARP1	90	71.656	ENSPMEG00000013656	larp1	91	69.712	Poecilia_mexicana
ENSCPBG00000002173	LARP1	91	70.917	ENSPREG00000005726	larp1	98	69.731	Poecilia_reticulata
ENSCPBG00000002173	LARP1	94	78.832	ENSPCAG00000006407	LARP1	100	78.624	Procavia_capensis
ENSCPBG00000002173	LARP1	94	73.597	ENSPCOG00000016949	LARP1	100	76.507	Propithecus_coquereli
ENSCPBG00000002173	LARP1	94	80.685	ENSPVAG00000002262	LARP1	96	76.974	Pteropus_vampyrus
ENSCPBG00000002173	LARP1	93	72.216	ENSPNYG00000007938	larp1	99	70.991	Pundamilia_nyererei
ENSCPBG00000002173	LARP1	93	72.845	ENSPNAG00000021427	larp1	97	70.983	Pygocentrus_nattereri
ENSCPBG00000002173	LARP1	94	78.586	ENSRNOG00000031544	Larp1	99	78.415	Rattus_norvegicus
ENSCPBG00000002173	LARP1	98	78.827	ENSRBIG00000038005	LARP1	97	78.827	Rhinopithecus_bieti
ENSCPBG00000002173	LARP1	98	78.827	ENSRROG00000034073	LARP1	100	81.243	Rhinopithecus_roxellana
ENSCPBG00000002173	LARP1	94	81.250	ENSSBOG00000019816	LARP1	100	78.586	Saimiri_boliviensis_boliviensis
ENSCPBG00000002173	LARP1	94	86.287	ENSSHAG00000011115	LARP1	100	85.774	Sarcophilus_harrisii
ENSCPBG00000002173	LARP1	92	72.316	ENSSFOG00015020304	larp1	94	70.898	Scleropages_formosus
ENSCPBG00000002173	LARP1	95	72.334	ENSSFOG00015018058	-	87	74.837	Scleropages_formosus
ENSCPBG00000002173	LARP1	86	73.403	ENSSMAG00000007468	larp1	88	73.103	Scophthalmus_maximus
ENSCPBG00000002173	LARP1	92	71.708	ENSSDUG00000000268	larp1	94	74.880	Seriola_dumerili
ENSCPBG00000002173	LARP1	85	73.721	ENSSLDG00000016505	larp1	94	75.000	Seriola_lalandi_dorsalis
ENSCPBG00000002173	LARP1	61	84.429	ENSSARG00000013907	-	88	85.121	Sorex_araneus
ENSCPBG00000002173	LARP1	100	92.593	ENSSPUG00000012179	-	97	92.877	Sphenodon_punctatus
ENSCPBG00000002173	LARP1	93	72.378	ENSSPAG00000003910	larp1	90	72.144	Stegastes_partitus
ENSCPBG00000002173	LARP1	94	81.224	ENSSSCG00000017069	LARP1	100	81.305	Sus_scrofa
ENSCPBG00000002173	LARP1	89	90.033	ENSTGUG00000000704	LARP1	100	90.252	Taeniopygia_guttata
ENSCPBG00000002173	LARP1	92	72.914	ENSTRUG00000009470	larp1	89	72.292	Takifugu_rubripes
ENSCPBG00000002173	LARP1	86	81.716	ENSTBEG00000003381	LARP1	100	81.716	Tupaia_belangeri
ENSCPBG00000002173	LARP1	93	81.092	ENSTTRG00000015934	LARP1	100	81.289	Tursiops_truncatus
ENSCPBG00000002173	LARP1	94	81.205	ENSUAMG00000019334	LARP1	96	77.538	Ursus_americanus
ENSCPBG00000002173	LARP1	93	79.747	ENSUMAG00000002934	LARP1	96	83.995	Ursus_maritimus
ENSCPBG00000002173	LARP1	88	81.506	ENSVVUG00000004644	LARP1	100	81.506	Vulpes_vulpes
ENSCPBG00000002173	LARP1	94	81.277	ENSXETG00000008413	larp1	95	80.513	Xenopus_tropicalis
ENSCPBG00000002173	LARP1	80	75.305	ENSXCOG00000004022	larp1	86	76.217	Xiphophorus_couchianus
ENSCPBG00000002173	LARP1	90	71.217	ENSXMAG00000018780	larp1	91	69.552	Xiphophorus_maculatus