EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000002430 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 104620 bases
Position: chrKK083316.1:184320-288939
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000003060	zf-C2H2	PF00096.26	4.3e-71	1	11
ENSCPBP00000003060	zf-C2H2	PF00096.26	4.3e-71	2	11
ENSCPBP00000003060	zf-C2H2	PF00096.26	4.3e-71	3	11
ENSCPBP00000003060	zf-C2H2	PF00096.26	4.3e-71	4	11
ENSCPBP00000003060	zf-C2H2	PF00096.26	4.3e-71	5	11
ENSCPBP00000003060	zf-C2H2	PF00096.26	4.3e-71	6	11
ENSCPBP00000003060	zf-C2H2	PF00096.26	4.3e-71	7	11
ENSCPBP00000003060	zf-C2H2	PF00096.26	4.3e-71	8	11
ENSCPBP00000003060	zf-C2H2	PF00096.26	4.3e-71	9	11
ENSCPBP00000003060	zf-C2H2	PF00096.26	4.3e-71	10	11
ENSCPBP00000003060	zf-C2H2	PF00096.26	4.3e-71	11	11
ENSCPBP00000003040	zf-C2H2	PF00096.26	3.2e-61	1	9
ENSCPBP00000003040	zf-C2H2	PF00096.26	3.2e-61	2	9
ENSCPBP00000003040	zf-C2H2	PF00096.26	3.2e-61	3	9
ENSCPBP00000003040	zf-C2H2	PF00096.26	3.2e-61	4	9
ENSCPBP00000003040	zf-C2H2	PF00096.26	3.2e-61	5	9
ENSCPBP00000003040	zf-C2H2	PF00096.26	3.2e-61	6	9
ENSCPBP00000003040	zf-C2H2	PF00096.26	3.2e-61	7	9
ENSCPBP00000003040	zf-C2H2	PF00096.26	3.2e-61	8	9
ENSCPBP00000003040	zf-C2H2	PF00096.26	3.2e-61	9	9
ENSCPBP00000003107	zf-C2H2	PF00096.26	5.4e-54	1	8
ENSCPBP00000003107	zf-C2H2	PF00096.26	5.4e-54	2	8
ENSCPBP00000003107	zf-C2H2	PF00096.26	5.4e-54	3	8
ENSCPBP00000003107	zf-C2H2	PF00096.26	5.4e-54	4	8
ENSCPBP00000003107	zf-C2H2	PF00096.26	5.4e-54	5	8
ENSCPBP00000003107	zf-C2H2	PF00096.26	5.4e-54	6	8
ENSCPBP00000003107	zf-C2H2	PF00096.26	5.4e-54	7	8
ENSCPBP00000003107	zf-C2H2	PF00096.26	5.4e-54	8	8
ENSCPBP00000003082	zf-C2H2	PF00096.26	3.3e-51	1	8
ENSCPBP00000003082	zf-C2H2	PF00096.26	3.3e-51	2	8
ENSCPBP00000003082	zf-C2H2	PF00096.26	3.3e-51	3	8
ENSCPBP00000003082	zf-C2H2	PF00096.26	3.3e-51	4	8
ENSCPBP00000003082	zf-C2H2	PF00096.26	3.3e-51	5	8
ENSCPBP00000003082	zf-C2H2	PF00096.26	3.3e-51	6	8
ENSCPBP00000003082	zf-C2H2	PF00096.26	3.3e-51	7	8
ENSCPBP00000003082	zf-C2H2	PF00096.26	3.3e-51	8	8
ENSCPBP00000003107	zf-met	PF12874.7	2.8e-10	1	1
ENSCPBP00000003082	zf-met	PF12874.7	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000003754	-	1284	-	ENSCPBP00000003082	427 (aa)	-	-
ENSCPBT00000003728	-	1683	-	ENSCPBP00000003060	560 (aa)	-	-
ENSCPBT00000003785	-	1236	-	ENSCPBP00000003107	411 (aa)	-	-
ENSCPBT00000003706	-	1638	-	ENSCPBP00000003040	545 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000002430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000002430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000002430	-	91	54.922	ENSCPBG00000002014	-	67	54.922
ENSCPBG00000002430	-	80	51.111	ENSCPBG00000009849	-	83	51.111
ENSCPBG00000002430	-	87	80.000	ENSCPBG00000003774	-	100	69.318
ENSCPBG00000002430	-	76	42.041	ENSCPBG00000013652	-	67	47.872
ENSCPBG00000002430	-	98	65.831	ENSCPBG00000016841	-	99	65.831
ENSCPBG00000002430	-	84	57.500	ENSCPBG00000026433	-	67	62.264
ENSCPBG00000002430	-	90	39.610	ENSCPBG00000026947	ZNF319	96	40.391
ENSCPBG00000002430	-	98	63.121	ENSCPBG00000004990	-	100	61.511
ENSCPBG00000002430	-	78	59.136	ENSCPBG00000005703	-	53	63.971
ENSCPBG00000002430	-	98	63.144	ENSCPBG00000017494	-	98	64.111
ENSCPBG00000002430	-	95	87.179	ENSCPBG00000012976	-	99	69.070
ENSCPBG00000002430	-	98	71.186	ENSCPBG00000001181	-	99	69.751
ENSCPBG00000002430	-	95	56.805	ENSCPBG00000002063	-	87	56.805
ENSCPBG00000002430	-	83	49.324	ENSCPBG00000023418	-	51	46.032
ENSCPBG00000002430	-	98	58.997	ENSCPBG00000021479	-	99	66.667
ENSCPBG00000002430	-	80	60.062	ENSCPBG00000017489	-	98	61.280
ENSCPBG00000002430	-	87	51.064	ENSCPBG00000005586	-	78	51.064
ENSCPBG00000002430	-	97	61.029	ENSCPBG00000021487	-	93	57.143
ENSCPBG00000002430	-	92	44.898	ENSCPBG00000008580	-	100	44.400
ENSCPBG00000002430	-	76	65.537	ENSCPBG00000001258	-	99	67.816
ENSCPBG00000002430	-	98	67.619	ENSCPBG00000004030	-	98	73.745
ENSCPBG00000002430	-	77	48.936	ENSCPBG00000001526	-	90	50.968
ENSCPBG00000002430	-	98	61.538	ENSCPBG00000015500	-	99	61.172
ENSCPBG00000002430	-	82	41.304	ENSCPBG00000004542	ZNF865	78	44.335
ENSCPBG00000002430	-	76	40.854	ENSCPBG00000024735	PRDM5	74	40.559
ENSCPBG00000002430	-	74	54.422	ENSCPBG00000015987	-	85	54.422
ENSCPBG00000002430	-	99	61.484	ENSCPBG00000001421	-	100	62.835
ENSCPBG00000002430	-	94	64.906	ENSCPBG00000003130	-	97	70.000
ENSCPBG00000002430	-	87	58.974	ENSCPBG00000009609	-	97	64.372
ENSCPBG00000002430	-	97	64.542	ENSCPBG00000001272	-	98	64.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000002430	-	77	61.423	ENSAMXG00000000353	-	95	61.423	Astyanax_mexicanus
ENSCPBG00000002430	-	81	56.187	ENSAMXG00000044028	-	98	58.000	Astyanax_mexicanus
ENSCPBG00000002430	-	82	53.558	ENSAMXG00000029783	-	99	53.846	Astyanax_mexicanus
ENSCPBG00000002430	-	84	55.610	ENSAMXG00000043019	-	94	55.610	Astyanax_mexicanus
ENSCPBG00000002430	-	97	50.920	ENSAMXG00000034096	-	98	50.920	Astyanax_mexicanus
ENSCPBG00000002430	-	98	47.284	ENSBTAG00000014593	-	97	51.228	Bos_taurus
ENSCPBG00000002430	-	76	60.498	ENSBTAG00000040358	-	100	63.929	Bos_taurus
ENSCPBG00000002430	-	76	55.882	ENSCSAG00000000471	-	99	57.995	Chlorocebus_sabaeus
ENSCPBG00000002430	-	91	52.997	ENSDNOG00000042588	-	99	52.824	Dasypus_novemcinctus
ENSCPBG00000002430	-	93	57.500	ENSDNOG00000047529	-	99	42.233	Dasypus_novemcinctus
ENSCPBG00000002430	-	86	52.288	ENSEBUG00000016164	-	77	48.710	Eptatretus_burgeri
ENSCPBG00000002430	-	76	51.004	ENSEBUG00000013221	-	81	53.386	Eptatretus_burgeri
ENSCPBG00000002430	-	89	48.447	ENSEBUG00000016969	-	81	47.945	Eptatretus_burgeri
ENSCPBG00000002430	-	82	42.262	ENSELUG00000019008	-	86	46.154	Esox_lucius
ENSCPBG00000002430	-	78	59.211	ENSFCAG00000043966	-	99	61.538	Felis_catus
ENSCPBG00000002430	-	79	47.987	ENSGAFG00000021131	-	83	51.203	Gambusia_affinis
ENSCPBG00000002430	-	78	47.280	ENSGAFG00000013048	-	82	42.126	Gambusia_affinis
ENSCPBG00000002430	-	76	56.013	ENSGGOG00000042802	-	99	57.724	Gorilla_gorilla
ENSCPBG00000002430	-	76	48.366	ENSHCOG00000019512	-	91	49.840	Hippocampus_comes
ENSCPBG00000002430	-	89	51.342	ENSHCOG00000014713	-	98	51.736	Hippocampus_comes
ENSCPBG00000002430	-	78	56.013	ENSMFAG00000008648	-	99	57.995	Macaca_fascicularis
ENSCPBG00000002430	-	78	56.013	ENSMNEG00000001556	-	99	57.995	Macaca_nemestrina
ENSCPBG00000002430	-	78	55.696	ENSMLEG00000007035	-	99	57.724	Mandrillus_leucophaeus
ENSCPBG00000002430	-	93	48.763	ENSMAUG00000015263	-	72	48.397	Mesocricetus_auratus
ENSCPBG00000002430	-	98	46.798	ENSMOCG00000003394	-	95	48.462	Microtus_ochrogaster
ENSCPBG00000002430	-	98	50.676	ENSMODG00000028916	-	90	50.676	Monodelphis_domestica
ENSCPBG00000002430	-	93	54.730	ENSMPUG00000006562	-	92	54.730	Mustela_putorius_furo
ENSCPBG00000002430	-	76	48.691	ENSNBRG00000010194	-	63	48.469	Neolamprologus_brichardi
ENSCPBG00000002430	-	73	58.197	ENSNLEG00000018988	-	99	57.724	Nomascus_leucogenys
ENSCPBG00000002430	-	95	50.473	ENSMEUG00000012153	-	99	53.979	Notamacropus_eugenii
ENSCPBG00000002430	-	83	53.448	ENSMEUG00000006978	-	99	53.448	Notamacropus_eugenii
ENSCPBG00000002430	-	93	50.230	ENSOGAG00000024538	-	70	50.000	Otolemur_garnettii
ENSCPBG00000002430	-	76	56.013	ENSPPAG00000014496	-	99	57.724	Pan_paniscus
ENSCPBG00000002430	-	78	55.696	ENSPANG00000030207	-	99	57.995	Papio_anubis
ENSCPBG00000002430	-	85	53.232	ENSPSIG00000009650	-	100	51.923	Pelodiscus_sinensis
ENSCPBG00000002430	-	95	70.455	ENSPSIG00000002565	-	85	70.455	Pelodiscus_sinensis
ENSCPBG00000002430	-	77	59.155	ENSPSIG00000010405	-	99	59.873	Pelodiscus_sinensis
ENSCPBG00000002430	-	96	48.943	ENSPEMG00000010242	-	96	48.462	Peromyscus_maniculatus_bairdii
ENSCPBG00000002430	-	82	42.857	ENSPLAG00000010389	-	80	43.523	Poecilia_latipinna
ENSCPBG00000002430	-	81	45.424	ENSPLAG00000021062	-	97	45.342	Poecilia_latipinna
ENSCPBG00000002430	-	78	46.809	ENSPLAG00000020710	-	71	47.122	Poecilia_latipinna
ENSCPBG00000002430	-	93	53.979	ENSPCAG00000009106	-	98	53.979	Procavia_capensis
ENSCPBG00000002430	-	78	39.145	ENSPNYG00000024243	-	94	40.000	Pundamilia_nyererei
ENSCPBG00000002430	-	77	57.491	ENSPNAG00000018644	-	91	59.615	Pygocentrus_nattereri
ENSCPBG00000002430	-	98	50.541	ENSSHAG00000001415	-	99	50.161	Sarcophilus_harrisii
ENSCPBG00000002430	-	95	48.860	ENSSDUG00000009534	-	77	48.860	Seriola_dumerili
ENSCPBG00000002430	-	79	49.441	ENSSLDG00000013760	-	97	49.691	Seriola_lalandi_dorsalis
ENSCPBG00000002430	-	77	57.843	ENSSPUG00000007147	-	98	57.705	Sphenodon_punctatus
ENSCPBG00000002430	-	83	45.926	ENSTRUG00000006896	-	96	45.574	Takifugu_rubripes
ENSCPBG00000002430	-	84	56.908	ENSVPAG00000011867	-	95	57.538	Vicugna_pacos
ENSCPBG00000002430	-	81	42.152	ENSXCOG00000009794	-	93	40.870	Xiphophorus_couchianus