EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000002553 (Gene tree)
Gene ID: 101938598
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 36593 bases
Position: chrKK088230.1:12273259-12309851
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000003149	tRNA_anti-codon	PF01336.25	6.8e-14	1	1
ENSCPBP00000003168	tRNA_anti-codon	PF01336.25	6.8e-14	1	1
ENSCPBP00000003149	tRNA-synt_2	PF00152.20	3.9e-82	1	1
ENSCPBP00000003168	tRNA-synt_2	PF00152.20	3.9e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000003860	-	2137	-	ENSCPBP00000003168	551 (aa)	XP_005281521	UPI0003891356
ENSCPBT00000003838	-	2137	-	ENSCPBP00000003149	551 (aa)	XP_005281521	UPI0003891356

Gene Model

Click here to download ENSCPBG00000002553's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000002553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000002553	-	95	71.947	ENSCPBG00000026969	KARS	89	71.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000002553	-	94	73.218	ENSG00000065427	KARS	100	73.529	Homo_sapiens
ENSCPBG00000002553	-	94	73.855	ENSAPOG00000010997	kars	92	73.855	Acanthochromis_polyacanthus
ENSCPBG00000002553	-	95	72.605	ENSAMEG00000005347	KARS	84	72.328	Ailuropoda_melanoleuca
ENSCPBG00000002553	-	96	67.547	ENSACIG00000000304	kars	92	67.547	Amphilophus_citrinellus
ENSCPBG00000002553	-	94	72.901	ENSAOCG00000012971	kars	89	72.941	Amphiprion_ocellaris
ENSCPBG00000002553	-	94	73.282	ENSAPEG00000011144	kars	91	73.282	Amphiprion_percula
ENSCPBG00000002553	-	93	74.269	ENSATEG00000004954	kars	89	74.269	Anabas_testudineus
ENSCPBG00000002553	-	92	70.334	ENSAPLG00000012705	KARS	92	70.334	Anas_platyrhynchos
ENSCPBG00000002553	-	94	71.401	ENSACAG00000007577	KARS	82	71.128	Anolis_carolinensis
ENSCPBG00000002553	-	94	61.260	ENSANAG00000031739	-	88	60.526	Aotus_nancymaae
ENSCPBG00000002553	-	94	73.410	ENSANAG00000030403	-	87	73.410	Aotus_nancymaae
ENSCPBG00000002553	-	96	72.830	ENSACLG00000001613	kars	90	72.830	Astatotilapia_calliptera
ENSCPBG00000002553	-	96	71.482	ENSAMXG00000030719	kars	92	71.482	Astyanax_mexicanus
ENSCPBG00000002553	-	96	71.212	ENSBTAG00000015677	KARS	68	71.212	Bos_taurus
ENSCPBG00000002553	-	91	61.508	WBGene00002238	kars-1	97	61.647	Caenorhabditis_elegans
ENSCPBG00000002553	-	94	73.603	ENSCJAG00000014213	KARS	88	73.321	Callithrix_jacchus
ENSCPBG00000002553	-	94	72.500	ENSCAFG00000020069	KARS	85	71.295	Canis_familiaris
ENSCPBG00000002553	-	94	72.500	ENSCAFG00020001721	KARS	89	71.295	Canis_lupus_dingo
ENSCPBG00000002553	-	94	71.154	ENSCHIG00000016073	-	87	71.154	Capra_hircus
ENSCPBG00000002553	-	94	72.308	ENSCHIG00000014108	-	87	72.308	Capra_hircus
ENSCPBG00000002553	-	95	72.745	ENSTSYG00000001643	KARS	90	72.745	Carlito_syrichta
ENSCPBG00000002553	-	95	67.370	ENSCAPG00000016234	KARS	87	67.370	Cavia_aperea
ENSCPBG00000002553	-	95	72.937	ENSCPOG00000012036	KARS	88	72.937	Cavia_porcellus
ENSCPBG00000002553	-	89	58.333	ENSCCAG00000030337	-	89	58.215	Cebus_capucinus
ENSCPBG00000002553	-	94	73.410	ENSCCAG00000034307	-	87	73.129	Cebus_capucinus
ENSCPBG00000002553	-	95	71.977	ENSCATG00000038129	KARS	88	71.977	Cercocebus_atys
ENSCPBG00000002553	-	95	73.512	ENSCLAG00000007905	KARS	90	71.271	Chinchilla_lanigera
ENSCPBG00000002553	-	95	71.401	ENSCSAG00000003664	KARS	83	71.401	Chlorocebus_sabaeus
ENSCPBG00000002553	-	81	77.506	ENSCHOG00000013447	KARS	72	77.506	Choloepus_hoffmanni
ENSCPBG00000002553	-	95	65.085	ENSCING00000009513	-	94	63.536	Ciona_intestinalis
ENSCPBG00000002553	-	95	65.709	ENSCSAVG00000007684	-	98	61.896	Ciona_savignyi
ENSCPBG00000002553	-	57	69.279	ENSCSAVG00000001136	-	97	69.279	Ciona_savignyi
ENSCPBG00000002553	-	95	68.138	ENSCANG00000032813	KARS	87	68.138	Colobus_angolensis_palliatus
ENSCPBG00000002553	-	96	72.348	ENSCGRG00001004055	KARS	88	72.348	Cricetulus_griseus_chok1gshd
ENSCPBG00000002553	-	96	72.348	ENSCGRG00000014242	KARS	88	72.348	Cricetulus_griseus_crigri
ENSCPBG00000002553	-	93	73.047	ENSCSEG00000008324	kars	88	73.047	Cynoglossus_semilaevis
ENSCPBG00000002553	-	93	73.633	ENSCVAG00000019686	kars	93	71.004	Cyprinodon_variegatus
ENSCPBG00000002553	-	93	73.981	ENSDARG00000103799	kars	98	74.409	Danio_rerio
ENSCPBG00000002553	-	94	72.832	ENSDNOG00000002241	KARS	83	72.553	Dasypus_novemcinctus
ENSCPBG00000002553	-	90	58.704	ENSDORG00000024214	-	84	58.704	Dipodomys_ordii
ENSCPBG00000002553	-	95	72.745	ENSDORG00000004780	-	88	72.745	Dipodomys_ordii
ENSCPBG00000002553	-	93	68.786	FBgn0027084	LysRS	93	66.419	Drosophila_melanogaster
ENSCPBG00000002553	-	99	70.567	ENSETEG00000008353	KARS	86	70.567	Echinops_telfairi
ENSCPBG00000002553	-	94	70.577	ENSEBUG00000001284	-	89	70.577	Eptatretus_burgeri
ENSCPBG00000002553	-	97	72.932	ENSEASG00005013497	KARS	89	72.932	Equus_asinus_asinus
ENSCPBG00000002553	-	97	72.932	ENSECAG00000013424	KARS	89	72.932	Equus_caballus
ENSCPBG00000002553	-	95	66.219	ENSEEUG00000007042	KARS	83	66.219	Erinaceus_europaeus
ENSCPBG00000002553	-	96	64.850	ENSELUG00000014575	kars	91	64.850	Esox_lucius
ENSCPBG00000002553	-	95	72.989	ENSFCAG00000008573	KARS	89	72.075	Felis_catus
ENSCPBG00000002553	-	97	70.632	ENSFALG00000002543	KARS	91	70.632	Ficedula_albicollis
ENSCPBG00000002553	-	93	73.592	ENSFDAG00000007155	KARS	87	73.308	Fukomys_damarensis
ENSCPBG00000002553	-	94	72.254	ENSFHEG00000006172	kars	90	72.254	Fundulus_heteroclitus
ENSCPBG00000002553	-	93	72.427	ENSGMOG00000002633	kars	84	72.427	Gadus_morhua
ENSCPBG00000002553	-	95	72.222	ENSGALG00000000907	KARS	91	72.222	Gallus_gallus
ENSCPBG00000002553	-	94	71.484	ENSGAFG00000017252	kars	94	68.991	Gambusia_affinis
ENSCPBG00000002553	-	96	71.028	ENSGACG00000015749	kars	90	71.028	Gasterosteus_aculeatus
ENSCPBG00000002553	-	94	72.481	ENSGAGG00000023836	KARS	87	72.481	Gopherus_agassizii
ENSCPBG00000002553	-	99	96.182	ENSGAGG00000011960	-	99	96.182	Gopherus_agassizii
ENSCPBG00000002553	-	94	73.218	ENSGGOG00000005515	KARS	87	72.937	Gorilla_gorilla
ENSCPBG00000002553	-	96	72.830	ENSHBUG00000013619	kars	90	72.830	Haplochromis_burtoni
ENSCPBG00000002553	-	95	60.491	ENSHGLG00000001298	-	87	60.491	Heterocephalus_glaber_female
ENSCPBG00000002553	-	95	73.129	ENSHGLG00000011898	KARS	90	73.129	Heterocephalus_glaber_female
ENSCPBG00000002553	-	94	66.281	ENSHGLG00000015235	-	87	66.027	Heterocephalus_glaber_female
ENSCPBG00000002553	-	95	60.302	ENSHGLG00100006466	-	87	60.302	Heterocephalus_glaber_male
ENSCPBG00000002553	-	94	66.281	ENSHGLG00100012523	-	88	70.127	Heterocephalus_glaber_male
ENSCPBG00000002553	-	95	73.129	ENSHGLG00100012264	KARS	87	73.269	Heterocephalus_glaber_male
ENSCPBG00000002553	-	93	74.023	ENSHCOG00000002900	kars	86	74.023	Hippocampus_comes
ENSCPBG00000002553	-	93	74.175	ENSIPUG00000009862	kars	93	71.650	Ictalurus_punctatus
ENSCPBG00000002553	-	94	73.218	ENSSTOG00000004205	KARS	87	72.937	Ictidomys_tridecemlineatus
ENSCPBG00000002553	-	95	73.129	ENSJJAG00000020406	Kars	89	72.571	Jaculus_jaculus
ENSCPBG00000002553	-	92	73.819	ENSKMAG00000006434	kars	88	73.819	Kryptolebias_marmoratus
ENSCPBG00000002553	-	96	71.617	ENSLBEG00000026537	kars	88	71.617	Labrus_bergylta
ENSCPBG00000002553	-	93	75.342	ENSLACG00000016399	-	99	75.342	Latimeria_chalumnae
ENSCPBG00000002553	-	94	73.938	ENSLACG00000006667	KARS	86	72.128	Latimeria_chalumnae
ENSCPBG00000002553	-	94	74.472	ENSLOCG00000004002	kars	90	74.472	Lepisosteus_oculatus
ENSCPBG00000002553	-	99	69.797	ENSLOCG00000013608	-	97	69.797	Lepisosteus_oculatus
ENSCPBG00000002553	-	99	70.545	ENSLAFG00000015340	KARS	87	70.545	Loxodonta_africana
ENSCPBG00000002553	-	95	71.785	ENSMFAG00000040024	KARS	87	71.785	Macaca_fascicularis
ENSCPBG00000002553	-	95	71.785	ENSMNEG00000042879	-	87	71.785	Macaca_nemestrina
ENSCPBG00000002553	-	83	69.079	ENSMNEG00000035832	-	88	69.079	Macaca_nemestrina
ENSCPBG00000002553	-	95	71.977	ENSMLEG00000034947	KARS	87	71.977	Mandrillus_leucophaeus
ENSCPBG00000002553	-	96	71.589	ENSMAMG00000021559	kars	88	71.589	Mastacembelus_armatus
ENSCPBG00000002553	-	96	72.830	ENSMZEG00005014382	kars	90	72.830	Maylandia_zebra
ENSCPBG00000002553	-	92	72.211	ENSMGAG00000009000	KARS	89	73.092	Meleagris_gallopavo
ENSCPBG00000002553	-	94	73.654	ENSMICG00000011997	KARS	87	73.654	Microcebus_murinus
ENSCPBG00000002553	-	94	70.906	ENSMOCG00000019029	-	87	70.906	Microtus_ochrogaster
ENSCPBG00000002553	-	94	73.796	ENSMOCG00000011829	Kars	87	73.796	Microtus_ochrogaster
ENSCPBG00000002553	-	95	72.814	ENSMMOG00000016934	kars	94	72.814	Mola_mola
ENSCPBG00000002553	-	93	72.461	ENSMODG00000002238	-	84	72.461	Monodelphis_domestica
ENSCPBG00000002553	-	95	71.648	ENSMODG00000002215	-	91	71.648	Monodelphis_domestica
ENSCPBG00000002553	-	96	71.107	ENSMALG00000020858	kars	92	71.107	Monopterus_albus
ENSCPBG00000002553	-	75	78.698	MGP_CAROLIEiJ_G0031588	Kars	86	78.698	Mus_caroli
ENSCPBG00000002553	-	97	71.910	ENSMUSG00000031948	Kars	90	71.910	Mus_musculus
ENSCPBG00000002553	-	96	72.348	MGP_PahariEiJ_G0023186	Kars	89	72.348	Mus_pahari
ENSCPBG00000002553	-	97	71.910	MGP_SPRETEiJ_G0032706	Kars	90	71.910	Mus_spretus
ENSCPBG00000002553	-	95	72.989	ENSMPUG00000009871	KARS	84	72.710	Mustela_putorius_furo
ENSCPBG00000002553	-	66	48.919	ENSMLUG00000026871	-	74	48.919	Myotis_lucifugus
ENSCPBG00000002553	-	97	72.045	ENSMLUG00000015119	-	89	72.045	Myotis_lucifugus
ENSCPBG00000002553	-	95	73.129	ENSNGAG00000018820	-	88	73.129	Nannospalax_galili
ENSCPBG00000002553	-	92	71.795	ENSNGAG00000022944	-	87	71.795	Nannospalax_galili
ENSCPBG00000002553	-	96	72.642	ENSNBRG00000011098	kars	90	72.642	Neolamprologus_brichardi
ENSCPBG00000002553	-	94	73.218	ENSNLEG00000013072	KARS	89	71.619	Nomascus_leucogenys
ENSCPBG00000002553	-	95	69.923	ENSMEUG00000008684	KARS	86	69.923	Notamacropus_eugenii
ENSCPBG00000002553	-	98	71.296	ENSOPRG00000012544	KARS	88	71.296	Ochotona_princeps
ENSCPBG00000002553	-	95	52.964	ENSODEG00000009464	-	91	52.964	Octodon_degus
ENSCPBG00000002553	-	95	72.814	ENSODEG00000013099	-	91	72.814	Octodon_degus
ENSCPBG00000002553	-	96	72.642	ENSONIG00000005937	kars	92	72.642	Oreochromis_niloticus
ENSCPBG00000002553	-	93	74.319	ENSOANG00000008179	KARS	87	74.319	Ornithorhynchus_anatinus
ENSCPBG00000002553	-	95	66.603	ENSOCUG00000015553	KARS	87	67.366	Oryctolagus_cuniculus
ENSCPBG00000002553	-	95	72.264	ENSORLG00000007627	kars	87	72.264	Oryzias_latipes
ENSCPBG00000002553	-	95	72.264	ENSORLG00020010056	kars	87	72.264	Oryzias_latipes_hni
ENSCPBG00000002553	-	95	72.264	ENSORLG00015008179	kars	87	72.264	Oryzias_latipes_hsok
ENSCPBG00000002553	-	96	72.233	ENSOMEG00000001710	kars	92	72.233	Oryzias_melastigma
ENSCPBG00000002553	-	95	70.937	ENSOGAG00000005903	KARS	84	70.937	Otolemur_garnettii
ENSCPBG00000002553	-	89	71.283	ENSOARG00000006928	KARS	86	71.283	Ovis_aries
ENSCPBG00000002553	-	94	73.025	ENSPPAG00000036192	KARS	87	72.745	Pan_paniscus
ENSCPBG00000002553	-	95	73.372	ENSPPRG00000003027	KARS	89	72.453	Panthera_pardus
ENSCPBG00000002553	-	95	73.180	ENSPTIG00000008011	KARS	89	72.264	Panthera_tigris_altaica
ENSCPBG00000002553	-	94	73.025	ENSPTRG00000008364	KARS	87	72.745	Pan_troglodytes
ENSCPBG00000002553	-	95	71.977	ENSPANG00000024106	KARS	83	71.977	Papio_anubis
ENSCPBG00000002553	-	96	72.744	ENSPKIG00000009896	kars	92	72.744	Paramormyrops_kingsleyae
ENSCPBG00000002553	-	93	73.047	ENSPSIG00000009294	KARS	88	73.047	Pelodiscus_sinensis
ENSCPBG00000002553	-	99	88.624	ENSPSIG00000003041	-	100	88.624	Pelodiscus_sinensis
ENSCPBG00000002553	-	96	71.780	ENSPMGG00000006117	kars	94	71.780	Periophthalmus_magnuspinnatus
ENSCPBG00000002553	-	95	72.624	ENSPEMG00000012277	Kars	88	72.624	Peromyscus_maniculatus_bairdii
ENSCPBG00000002553	-	94	71.236	ENSPMAG00000008360	-	83	71.236	Petromyzon_marinus
ENSCPBG00000002553	-	94	72.447	ENSPCIG00000025469	-	85	72.447	Phascolarctos_cinereus
ENSCPBG00000002553	-	96	71.970	ENSPCIG00000010761	-	89	71.970	Phascolarctos_cinereus
ENSCPBG00000002553	-	94	71.869	ENSPFOG00000013253	kars	85	71.869	Poecilia_formosa
ENSCPBG00000002553	-	94	72.062	ENSPLAG00000004189	kars	90	72.062	Poecilia_latipinna
ENSCPBG00000002553	-	94	71.869	ENSPMEG00000015698	kars	90	71.869	Poecilia_mexicana
ENSCPBG00000002553	-	94	72.447	ENSPREG00000023179	kars	90	72.447	Poecilia_reticulata
ENSCPBG00000002553	-	94	73.410	ENSPPYG00000007567	KARS	83	73.129	Pongo_abelii
ENSCPBG00000002553	-	92	68.317	ENSPCAG00000010790	KARS	97	68.317	Procavia_capensis
ENSCPBG00000002553	-	81	77.951	ENSPCOG00000003166	KARS	83	77.951	Propithecus_coquereli
ENSCPBG00000002553	-	97	72.045	ENSPVAG00000006746	KARS	85	72.045	Pteropus_vampyrus
ENSCPBG00000002553	-	96	72.830	ENSPNYG00000013095	kars	90	72.830	Pundamilia_nyererei
ENSCPBG00000002553	-	93	73.489	ENSPNAG00000013828	kars	89	73.489	Pygocentrus_nattereri
ENSCPBG00000002553	-	95	72.053	ENSRNOG00000019456	Kars	86	70.092	Rattus_norvegicus
ENSCPBG00000002553	-	95	72.169	ENSRBIG00000030118	KARS	88	72.169	Rhinopithecus_bieti
ENSCPBG00000002553	-	95	72.169	ENSRROG00000041418	KARS	88	72.169	Rhinopithecus_roxellana
ENSCPBG00000002553	-	85	34.592	YNL073W	-	86	34.592	Saccharomyces_cerevisiae
ENSCPBG00000002553	-	93	58.812	YDR037W	KRS1	94	56.396	Saccharomyces_cerevisiae
ENSCPBG00000002553	-	94	73.410	ENSSBOG00000019255	KARS	90	73.129	Saimiri_boliviensis_boliviensis
ENSCPBG00000002553	-	94	69.364	ENSSHAG00000001359	-	90	69.364	Sarcophilus_harrisii
ENSCPBG00000002553	-	96	62.335	ENSSHAG00000009005	-	95	62.335	Sarcophilus_harrisii
ENSCPBG00000002553	-	95	62.667	ENSSHAG00000002050	-	85	62.667	Sarcophilus_harrisii
ENSCPBG00000002553	-	93	74.369	ENSSFOG00015014837	kars	92	74.369	Scleropages_formosus
ENSCPBG00000002553	-	96	71.429	ENSSMAG00000021441	kars	92	71.429	Scophthalmus_maximus
ENSCPBG00000002553	-	96	71.429	ENSSDUG00000001202	kars	92	71.429	Seriola_dumerili
ENSCPBG00000002553	-	96	71.028	ENSSLDG00000021220	kars	93	71.028	Seriola_lalandi_dorsalis
ENSCPBG00000002553	-	76	83.654	ENSSARG00000011493	KARS	73	83.654	Sorex_araneus
ENSCPBG00000002553	-	96	72.590	ENSSPUG00000004974	KARS	88	72.590	Sphenodon_punctatus
ENSCPBG00000002553	-	69	78.215	ENSSPUG00000000449	-	89	78.215	Sphenodon_punctatus
ENSCPBG00000002553	-	96	72.368	ENSSPAG00000020365	kars	92	72.368	Stegastes_partitus
ENSCPBG00000002553	-	94	72.832	ENSSSCG00000002704	KARS	88	71.917	Sus_scrofa
ENSCPBG00000002553	-	97	70.841	ENSTGUG00000008400	KARS	96	70.841	Taeniopygia_guttata
ENSCPBG00000002553	-	94	72.340	ENSTRUG00000017551	kars	89	71.267	Takifugu_rubripes
ENSCPBG00000002553	-	93	72.568	ENSTNIG00000009351	kars	89	72.852	Tetraodon_nigroviridis
ENSCPBG00000002553	-	81	63.697	ENSTBEG00000004610	KARS	78	63.697	Tupaia_belangeri
ENSCPBG00000002553	-	95	72.169	ENSTTRG00000001221	KARS	86	69.797	Tursiops_truncatus
ENSCPBG00000002553	-	95	72.797	ENSUAMG00000017557	KARS	90	70.147	Ursus_americanus
ENSCPBG00000002553	-	95	72.797	ENSUMAG00000014559	KARS	86	70.147	Ursus_maritimus
ENSCPBG00000002553	-	94	71.676	ENSVPAG00000003716	KARS	83	71.401	Vicugna_pacos
ENSCPBG00000002553	-	94	72.115	ENSVVUG00000024338	KARS	92	72.515	Vulpes_vulpes
ENSCPBG00000002553	-	93	71.930	ENSXETG00000003569	kars	88	71.484	Xenopus_tropicalis
ENSCPBG00000002553	-	94	71.869	ENSXCOG00000011313	kars	96	70.093	Xiphophorus_couchianus
ENSCPBG00000002553	-	94	71.676	ENSXMAG00000003191	kars	93	69.907	Xiphophorus_maculatus