EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000002600 (Gene tree)
Gene ID: 101931013
Gene Symbol: CHD1L
Alias: ALC1
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 38091 bases
Position: chr1:18314017-18352107
Accession: 1916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000003230	ResIII	PF04851.15	1.1e-06	1	1
ENSCPBP00000003208	ResIII	PF04851.15	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000003934	CHD1L-202	3550	XM_005292671	ENSCPBP00000003230	849 (aa)	XP_005292728	UPI0003891942
ENSCPBT00000003909	CHD1L-201	3661	XM_005292669	ENSCPBP00000003208	886 (aa)	XP_005292726	UPI000388E2F9

Gene Model

Click here to download ENSCPBG00000002600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000002600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000002600	CHD1L	50	31.499	ENSCPBG00000011965	ERCC6L	81	32.727
ENSCPBG00000002600	CHD1L	61	43.761	ENSCPBG00000027535	SMARCA5	52	43.761
ENSCPBG00000002600	CHD1L	57	45.779	ENSCPBG00000018049	-	60	45.693
ENSCPBG00000002600	CHD1L	62	43.958	ENSCPBG00000001146	SMARCA1	53	43.958
ENSCPBG00000002600	CHD1L	51	31.836	ENSCPBG00000005675	RAD54L	68	31.507
ENSCPBG00000002600	CHD1L	52	39.483	ENSCPBG00000025739	HELLS	79	39.483
ENSCPBG00000002600	CHD1L	51	32.207	ENSCPBG00000003204	-	58	32.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000002600	CHD1L	97	76.682	ENSG00000131778	CHD1L	97	77.114	Homo_sapiens
ENSCPBG00000002600	CHD1L	95	66.313	ENSAPOG00000001539	chd1l	96	66.431	Acanthochromis_polyacanthus
ENSCPBG00000002600	CHD1L	99	75.624	ENSAMEG00000017063	CHD1L	97	76.261	Ailuropoda_melanoleuca
ENSCPBG00000002600	CHD1L	95	65.457	ENSACIG00000001164	chd1l	97	66.042	Amphilophus_citrinellus
ENSCPBG00000002600	CHD1L	97	65.545	ENSAOCG00000014510	chd1l	84	66.276	Amphiprion_ocellaris
ENSCPBG00000002600	CHD1L	97	62.788	ENSAPEG00000017450	chd1l	93	64.033	Amphiprion_percula
ENSCPBG00000002600	CHD1L	95	63.882	ENSAPEG00000017573	chd1l	93	63.958	Amphiprion_percula
ENSCPBG00000002600	CHD1L	98	65.188	ENSATEG00000013058	chd1l	91	66.981	Anabas_testudineus
ENSCPBG00000002600	CHD1L	95	82.722	ENSAPLG00000009976	CHD1L	94	83.195	Anas_platyrhynchos
ENSCPBG00000002600	CHD1L	98	75.196	ENSACAG00000017686	CHD1L	98	75.196	Anolis_carolinensis
ENSCPBG00000002600	CHD1L	96	76.671	ENSANAG00000024347	CHD1L	94	76.851	Aotus_nancymaae
ENSCPBG00000002600	CHD1L	97	65.212	ENSACLG00000019304	chd1l	95	65.000	Astatotilapia_calliptera
ENSCPBG00000002600	CHD1L	99	59.933	ENSAMXG00000012367	chd1l	86	60.436	Astyanax_mexicanus
ENSCPBG00000002600	CHD1L	98	75.945	ENSBTAG00000020831	CHD1L	97	76.032	Bos_taurus
ENSCPBG00000002600	CHD1L	96	76.788	ENSCJAG00000002406	CHD1L	95	76.968	Callithrix_jacchus
ENSCPBG00000002600	CHD1L	99	72.789	ENSCAFG00000010944	CHD1L	97	73.394	Canis_familiaris
ENSCPBG00000002600	CHD1L	99	74.578	ENSCAFG00020020121	CHD1L	96	77.024	Canis_lupus_dingo
ENSCPBG00000002600	CHD1L	99	74.774	ENSCHIG00000013871	CHD1L	97	75.688	Capra_hircus
ENSCPBG00000002600	CHD1L	94	77.685	ENSTSYG00000003005	CHD1L	98	77.778	Carlito_syrichta
ENSCPBG00000002600	CHD1L	96	75.233	ENSCPOG00000009000	CHD1L	95	75.204	Cavia_porcellus
ENSCPBG00000002600	CHD1L	97	74.014	ENSCCAG00000036079	CHD1L	95	74.186	Cebus_capucinus
ENSCPBG00000002600	CHD1L	98	76.613	ENSCATG00000031044	CHD1L	96	76.525	Cercocebus_atys
ENSCPBG00000002600	CHD1L	96	77.013	ENSCLAG00000000880	CHD1L	96	77.076	Chinchilla_lanigera
ENSCPBG00000002600	CHD1L	98	76.613	ENSCSAG00000018386	CHD1L	96	76.525	Chlorocebus_sabaeus
ENSCPBG00000002600	CHD1L	98	75.632	ENSCANG00000020239	CHD1L	96	75.719	Colobus_angolensis_palliatus
ENSCPBG00000002600	CHD1L	95	76.118	ENSCGRG00001021624	Chd1l	95	76.118	Cricetulus_griseus_chok1gshd
ENSCPBG00000002600	CHD1L	93	76.082	ENSCGRG00000007554	Chd1l	98	76.082	Cricetulus_griseus_crigri
ENSCPBG00000002600	CHD1L	100	64.191	ENSCVAG00000002595	chd1l	91	63.188	Cyprinodon_variegatus
ENSCPBG00000002600	CHD1L	98	64.605	ENSDARG00000015471	chd1l	85	64.384	Danio_rerio
ENSCPBG00000002600	CHD1L	99	76.477	ENSDNOG00000019504	CHD1L	97	76.870	Dasypus_novemcinctus
ENSCPBG00000002600	CHD1L	99	70.759	ENSDORG00000013555	Chd1l	97	71.559	Dipodomys_ordii
ENSCPBG00000002600	CHD1L	90	71.201	ENSETEG00000008445	CHD1L	87	72.545	Echinops_telfairi
ENSCPBG00000002600	CHD1L	65	58.571	ENSEBUG00000005791	chd1l	74	74.000	Eptatretus_burgeri
ENSCPBG00000002600	CHD1L	99	76.250	ENSEASG00005007364	CHD1L	99	78.272	Equus_asinus_asinus
ENSCPBG00000002600	CHD1L	99	76.364	ENSECAG00000008915	CHD1L	99	78.395	Equus_caballus
ENSCPBG00000002600	CHD1L	95	55.968	ENSELUG00000016844	chd1l	82	56.315	Esox_lucius
ENSCPBG00000002600	CHD1L	98	75.973	ENSFCAG00000007777	CHD1L	97	76.261	Felis_catus
ENSCPBG00000002600	CHD1L	100	80.674	ENSFALG00000006087	CHD1L	97	81.558	Ficedula_albicollis
ENSCPBG00000002600	CHD1L	94	76.394	ENSFDAG00000012431	CHD1L	98	76.722	Fukomys_damarensis
ENSCPBG00000002600	CHD1L	98	64.032	ENSFHEG00000012420	chd1l	85	65.299	Fundulus_heteroclitus
ENSCPBG00000002600	CHD1L	100	81.194	ENSGALG00000015038	CHD1L	97	81.860	Gallus_gallus
ENSCPBG00000002600	CHD1L	97	65.052	ENSGAFG00000018198	chd1l	97	62.932	Gambusia_affinis
ENSCPBG00000002600	CHD1L	59	64.751	ENSGACG00000014042	chd1l	99	64.751	Gasterosteus_aculeatus
ENSCPBG00000002600	CHD1L	97	96.868	ENSGAGG00000014432	CHD1L	99	96.868	Gopherus_agassizii
ENSCPBG00000002600	CHD1L	97	76.450	ENSGGOG00000001067	CHD1L	96	76.539	Gorilla_gorilla
ENSCPBG00000002600	CHD1L	97	65.098	ENSHBUG00000007464	chd1l	96	64.877	Haplochromis_burtoni
ENSCPBG00000002600	CHD1L	96	75.584	ENSHGLG00000008933	CHD1L	95	75.906	Heterocephalus_glaber_female
ENSCPBG00000002600	CHD1L	94	74.289	ENSHGLG00100007155	CHD1L	98	74.614	Heterocephalus_glaber_male
ENSCPBG00000002600	CHD1L	94	64.320	ENSHCOG00000012787	chd1l	92	64.439	Hippocampus_comes
ENSCPBG00000002600	CHD1L	99	60.787	ENSIPUG00000022617	chd1l	86	61.003	Ictalurus_punctatus
ENSCPBG00000002600	CHD1L	99	68.350	ENSSTOG00000007032	CHD1L	97	69.222	Ictidomys_tridecemlineatus
ENSCPBG00000002600	CHD1L	100	62.458	ENSKMAG00000014358	chd1l	86	64.229	Kryptolebias_marmoratus
ENSCPBG00000002600	CHD1L	98	63.844	ENSLBEG00000023845	chd1l	96	64.251	Labrus_bergylta
ENSCPBG00000002600	CHD1L	96	66.936	ENSLACG00000006262	CHD1L	84	67.014	Latimeria_chalumnae
ENSCPBG00000002600	CHD1L	98	69.620	ENSLOCG00000010574	chd1l	87	69.451	Lepisosteus_oculatus
ENSCPBG00000002600	CHD1L	96	75.786	ENSLAFG00000018136	CHD1L	99	76.415	Loxodonta_africana
ENSCPBG00000002600	CHD1L	95	76.694	ENSMFAG00000043562	CHD1L	98	77.901	Macaca_fascicularis
ENSCPBG00000002600	CHD1L	98	76.498	ENSMMUG00000009024	CHD1L	96	76.410	Macaca_mulatta
ENSCPBG00000002600	CHD1L	98	76.498	ENSMNEG00000039905	CHD1L	96	76.410	Macaca_nemestrina
ENSCPBG00000002600	CHD1L	98	76.728	ENSMLEG00000030900	CHD1L	96	76.640	Mandrillus_leucophaeus
ENSCPBG00000002600	CHD1L	97	64.583	ENSMAMG00000012822	chd1l	97	63.423	Mastacembelus_armatus
ENSCPBG00000002600	CHD1L	97	65.212	ENSMZEG00005020830	chd1l	86	65.928	Maylandia_zebra
ENSCPBG00000002600	CHD1L	97	80.792	ENSMGAG00000014304	CHD1L	98	81.948	Meleagris_gallopavo
ENSCPBG00000002600	CHD1L	98	76.403	ENSMICG00000002497	CHD1L	97	76.491	Microcebus_murinus
ENSCPBG00000002600	CHD1L	100	73.860	ENSMOCG00000006305	Chd1l	98	74.830	Microtus_ochrogaster
ENSCPBG00000002600	CHD1L	99	61.287	ENSMMOG00000005964	chd1l	91	61.916	Mola_mola
ENSCPBG00000002600	CHD1L	100	76.207	ENSMODG00000018717	CHD1L	98	77.117	Monodelphis_domestica
ENSCPBG00000002600	CHD1L	97	65.207	ENSMALG00000014675	chd1l	84	65.731	Monopterus_albus
ENSCPBG00000002600	CHD1L	99	73.649	MGP_CAROLIEiJ_G0025401	Chd1l	98	74.230	Mus_caroli
ENSCPBG00000002600	CHD1L	98	74.095	ENSMUSG00000028089	Chd1l	98	73.869	Mus_musculus
ENSCPBG00000002600	CHD1L	100	73.401	MGP_PahariEiJ_G0026845	Chd1l	98	74.371	Mus_pahari
ENSCPBG00000002600	CHD1L	98	74.171	MGP_SPRETEiJ_G0026347	Chd1l	98	74.171	Mus_spretus
ENSCPBG00000002600	CHD1L	99	76.077	ENSMPUG00000000615	CHD1L	97	76.491	Mustela_putorius_furo
ENSCPBG00000002600	CHD1L	96	75.087	ENSMLUG00000007573	CHD1L	96	74.146	Myotis_lucifugus
ENSCPBG00000002600	CHD1L	97	70.810	ENSNGAG00000000908	Chd1l	97	71.744	Nannospalax_galili
ENSCPBG00000002600	CHD1L	96	62.860	ENSNBRG00000006021	chd1l	92	63.477	Neolamprologus_brichardi
ENSCPBG00000002600	CHD1L	98	75.517	ENSNLEG00000000179	CHD1L	95	76.761	Nomascus_leucogenys
ENSCPBG00000002600	CHD1L	95	65.845	ENSOPRG00000006973	CHD1L	99	66.192	Ochotona_princeps
ENSCPBG00000002600	CHD1L	97	71.510	ENSODEG00000002494	CHD1L	96	72.216	Octodon_degus
ENSCPBG00000002600	CHD1L	97	65.442	ENSONIG00000003183	chd1l	87	66.278	Oreochromis_niloticus
ENSCPBG00000002600	CHD1L	86	72.892	ENSOANG00000003068	CHD1L	93	73.152	Ornithorhynchus_anatinus
ENSCPBG00000002600	CHD1L	98	71.396	ENSOCUG00000009336	CHD1L	96	71.559	Oryctolagus_cuniculus
ENSCPBG00000002600	CHD1L	99	62.220	ENSORLG00000003673	chd1l	95	63.146	Oryzias_latipes
ENSCPBG00000002600	CHD1L	98	63.086	ENSORLG00020005123	chd1l	99	62.040	Oryzias_latipes_hni
ENSCPBG00000002600	CHD1L	98	63.128	ENSORLG00015001680	chd1l	98	62.959	Oryzias_latipes_hsok
ENSCPBG00000002600	CHD1L	78	61.974	ENSOMEG00000006109	chd1l	80	64.407	Oryzias_melastigma
ENSCPBG00000002600	CHD1L	99	74.632	ENSOGAG00000008775	CHD1L	97	75.143	Otolemur_garnettii
ENSCPBG00000002600	CHD1L	99	74.972	ENSOARG00000020547	CHD1L	98	76.905	Ovis_aries
ENSCPBG00000002600	CHD1L	96	76.436	ENSPPAG00000039193	CHD1L	98	78.079	Pan_paniscus
ENSCPBG00000002600	CHD1L	98	76.087	ENSPPRG00000010258	CHD1L	97	76.261	Panthera_pardus
ENSCPBG00000002600	CHD1L	97	76.682	ENSPTRG00000001220	CHD1L	96	76.771	Pan_troglodytes
ENSCPBG00000002600	CHD1L	96	77.791	ENSPANG00000009170	CHD1L	96	76.525	Papio_anubis
ENSCPBG00000002600	CHD1L	100	62.975	ENSPKIG00000022166	chd1l	97	62.665	Paramormyrops_kingsleyae
ENSCPBG00000002600	CHD1L	100	92.212	ENSPSIG00000012595	CHD1L	97	93.096	Pelodiscus_sinensis
ENSCPBG00000002600	CHD1L	97	73.448	ENSPEMG00000013528	Chd1l	95	73.958	Peromyscus_maniculatus_bairdii
ENSCPBG00000002600	CHD1L	93	76.150	ENSPCIG00000030409	CHD1L	98	77.009	Phascolarctos_cinereus
ENSCPBG00000002600	CHD1L	99	63.688	ENSPFOG00000015948	chd1l	86	64.253	Poecilia_formosa
ENSCPBG00000002600	CHD1L	99	63.861	ENSPLAG00000015145	chd1l	98	63.750	Poecilia_latipinna
ENSCPBG00000002600	CHD1L	99	63.442	ENSPMEG00000008720	chd1l	91	64.000	Poecilia_mexicana
ENSCPBG00000002600	CHD1L	98	63.512	ENSPREG00000017885	chd1l	98	63.512	Poecilia_reticulata
ENSCPBG00000002600	CHD1L	98	76.782	ENSPPYG00000000946	CHD1L	96	76.870	Pongo_abelii
ENSCPBG00000002600	CHD1L	97	66.897	ENSPCAG00000005959	CHD1L	95	67.644	Procavia_capensis
ENSCPBG00000002600	CHD1L	95	70.248	ENSPVAG00000006084	CHD1L	99	70.560	Pteropus_vampyrus
ENSCPBG00000002600	CHD1L	96	64.598	ENSPNYG00000013001	chd1l	95	65.228	Pundamilia_nyererei
ENSCPBG00000002600	CHD1L	96	65.070	ENSPNAG00000011881	chd1l	83	65.654	Pygocentrus_nattereri
ENSCPBG00000002600	CHD1L	98	75.000	ENSRNOG00000017669	Chd1l	97	75.227	Rattus_norvegicus
ENSCPBG00000002600	CHD1L	96	76.643	ENSRBIG00000041272	CHD1L	95	76.643	Rhinopithecus_bieti
ENSCPBG00000002600	CHD1L	95	76.450	ENSRROG00000041354	CHD1L	95	76.387	Rhinopithecus_roxellana
ENSCPBG00000002600	CHD1L	98	73.853	ENSSHAG00000017395	CHD1L	97	73.968	Sarcophilus_harrisii
ENSCPBG00000002600	CHD1L	96	67.133	ENSSFOG00015003649	chd1l	96	65.371	Scleropages_formosus
ENSCPBG00000002600	CHD1L	98	61.964	ENSSMAG00000019377	chd1l	94	62.295	Scophthalmus_maximus
ENSCPBG00000002600	CHD1L	97	63.499	ENSSDUG00000019831	chd1l	94	64.804	Seriola_dumerili
ENSCPBG00000002600	CHD1L	97	63.333	ENSSLDG00000012714	chd1l	94	64.623	Seriola_lalandi_dorsalis
ENSCPBG00000002600	CHD1L	100	81.849	ENSSPUG00000016865	CHD1L	98	82.739	Sphenodon_punctatus
ENSCPBG00000002600	CHD1L	98	65.561	ENSSPAG00000017653	chd1l	90	66.316	Stegastes_partitus
ENSCPBG00000002600	CHD1L	99	73.349	ENSSSCG00000006701	CHD1L	97	74.727	Sus_scrofa
ENSCPBG00000002600	CHD1L	98	82.069	ENSTGUG00000013392	-	98	83.118	Taeniopygia_guttata
ENSCPBG00000002600	CHD1L	95	59.155	ENSTNIG00000004902	chd1l	99	59.155	Tetraodon_nigroviridis
ENSCPBG00000002600	CHD1L	96	72.547	ENSTTRG00000011711	CHD1L	98	73.540	Tursiops_truncatus
ENSCPBG00000002600	CHD1L	99	75.113	ENSUAMG00000021991	CHD1L	97	75.917	Ursus_americanus
ENSCPBG00000002600	CHD1L	99	74.887	ENSUMAG00000009733	CHD1L	96	76.859	Ursus_maritimus
ENSCPBG00000002600	CHD1L	99	75.170	ENSVVUG00000007316	CHD1L	93	75.890	Vulpes_vulpes
ENSCPBG00000002600	CHD1L	99	62.108	ENSXCOG00000008336	chd1l	86	62.887	Xiphophorus_couchianus
ENSCPBG00000002600	CHD1L	98	65.407	ENSXMAG00000015898	chd1l	96	62.604	Xiphophorus_maculatus