EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000002804 (Gene tree)
Gene ID: 101943168
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 18219 bases
Position: chrKK083206.1:656604-674822
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000003495	Methyltransf_31	PF13847.6	4.1e-35	1	2
ENSCPBP00000003495	Methyltransf_31	PF13847.6	4.1e-35	2	2
ENSCPBP00000003464	Methyltransf_31	PF13847.6	4.7e-35	1	2
ENSCPBP00000003464	Methyltransf_31	PF13847.6	4.7e-35	2	2
ENSCPBP00000003477	Methyltransf_31	PF13847.6	3.1e-22	1	1
ENSCPBP00000003504	Methyltransf_31	PF13847.6	8.3e-18	1	1
ENSCPBP00000003447	Methyltransf_31	PF13847.6	1.1e-17	1	1
ENSCPBP00000003455	Methyltransf_31	PF13847.6	1.1e-17	1	1
ENSCPBP00000003487	Methyltransf_31	PF13847.6	2.5e-16	1	1
ENSCPBP00000003464	Methyltransf_8	PF05148.15	6.5e-10	1	1
ENSCPBP00000003477	Methyltransf_8	PF05148.15	1.7e-08	1	1
ENSCPBP00000003504	Methyltransf_8	PF05148.15	8.4e-05	1	1
ENSCPBP00000003447	Methyltransf_8	PF05148.15	0.00033	1	1
ENSCPBP00000003455	Methyltransf_8	PF05148.15	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000004208	-	1816	-	ENSCPBP00000003447	292 (aa)	-	-
ENSCPBT00000004217	-	1816	-	ENSCPBP00000003455	292 (aa)	-	-
ENSCPBT00000004256	-	961	-	ENSCPBP00000003487	271 (aa)	-	-
ENSCPBT00000004244	-	1702	XM_005311191	ENSCPBP00000003477	518 (aa)	XP_005311248	UPI000388F044
ENSCPBT00000004229	-	1744	XM_005311190	ENSCPBP00000003464	532 (aa)	XP_005311247	UPI000388A74A
ENSCPBT00000004264	-	1820	-	ENSCPBP00000003495	478 (aa)	-	-
ENSCPBT00000004275	-	858	-	ENSCPBP00000003504	279 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000002804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000002804's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000002804	-	99	46.296	ENSAPOG00000015421	zgc:162396	99	46.296	Acanthochromis_polyacanthus
ENSCPBG00000002804	-	98	46.816	ENSACIG00000015427	zgc:162396	98	46.816	Amphilophus_citrinellus
ENSCPBG00000002804	-	99	45.185	ENSAOCG00000004131	zgc:162396	99	45.185	Amphiprion_ocellaris
ENSCPBG00000002804	-	99	45.556	ENSAPEG00000008189	zgc:162396	99	45.556	Amphiprion_percula
ENSCPBG00000002804	-	99	47.778	ENSATEG00000011813	zgc:162396	98	47.778	Anabas_testudineus
ENSCPBG00000002804	-	98	61.660	ENSAPLG00000012593	-	99	61.660	Anas_platyrhynchos
ENSCPBG00000002804	-	99	47.601	ENSACLG00000006906	zgc:162396	99	47.601	Astatotilapia_calliptera
ENSCPBG00000002804	-	90	43.363	ENSAMXG00000037578	zgc:162396	97	44.737	Astyanax_mexicanus
ENSCPBG00000002804	-	99	48.327	ENSAMXG00000030552	zgc:162396	99	48.327	Astyanax_mexicanus
ENSCPBG00000002804	-	76	37.748	ENSCING00000014393	-	94	37.748	Ciona_intestinalis
ENSCPBG00000002804	-	92	30.488	ENSCING00000012960	-	93	33.163	Ciona_intestinalis
ENSCPBG00000002804	-	99	43.704	ENSCVAG00000021429	zgc:162396	99	43.750	Cyprinodon_variegatus
ENSCPBG00000002804	-	99	47.955	ENSDARG00000069549	zgc:162396	99	47.955	Danio_rerio
ENSCPBG00000002804	-	99	47.212	ENSELUG00000005372	zgc:162396	99	47.212	Esox_lucius
ENSCPBG00000002804	-	99	60.370	ENSFALG00000012826	-	99	61.236	Ficedula_albicollis
ENSCPBG00000002804	-	99	44.815	ENSFHEG00000005224	-	99	44.922	Fundulus_heteroclitus
ENSCPBG00000002804	-	98	60.236	ENSGALG00000050548	-	99	60.674	Gallus_gallus
ENSCPBG00000002804	-	98	60.236	ENSGALG00000042073	-	99	60.674	Gallus_gallus
ENSCPBG00000002804	-	98	60.236	ENSGALG00000047535	-	99	60.674	Gallus_gallus
ENSCPBG00000002804	-	99	44.815	ENSGAFG00000018387	-	96	48.731	Gambusia_affinis
ENSCPBG00000002804	-	99	47.778	ENSGACG00000002200	zgc:162396	96	47.778	Gasterosteus_aculeatus
ENSCPBG00000002804	-	57	90.909	ENSGAGG00000004677	-	89	90.909	Gopherus_agassizii
ENSCPBG00000002804	-	99	47.232	ENSHBUG00000017584	zgc:162396	99	47.232	Haplochromis_burtoni
ENSCPBG00000002804	-	99	47.955	ENSIPUG00000001159	zgc:162396	99	47.955	Ictalurus_punctatus
ENSCPBG00000002804	-	99	49.442	ENSIPUG00000001213	-	99	49.442	Ictalurus_punctatus
ENSCPBG00000002804	-	99	49.442	ENSIPUG00000001171	-	99	49.442	Ictalurus_punctatus
ENSCPBG00000002804	-	99	44.074	ENSKMAG00000018426	-	96	47.716	Kryptolebias_marmoratus
ENSCPBG00000002804	-	99	45.556	ENSLBEG00000026502	zgc:162396	99	45.556	Labrus_bergylta
ENSCPBG00000002804	-	99	51.301	ENSLACG00000009261	-	99	51.301	Latimeria_chalumnae
ENSCPBG00000002804	-	99	46.296	ENSMAMG00000013213	zgc:162396	99	46.296	Mastacembelus_armatus
ENSCPBG00000002804	-	99	47.601	ENSMZEG00005000798	zgc:162396	99	47.601	Maylandia_zebra
ENSCPBG00000002804	-	98	58.366	ENSMGAG00000003269	-	99	60.112	Meleagris_gallopavo
ENSCPBG00000002804	-	99	43.066	ENSMMOG00000005445	zgc:162396	99	43.066	Mola_mola
ENSCPBG00000002804	-	99	46.667	ENSNBRG00000014954	zgc:162396	99	46.667	Neolamprologus_brichardi
ENSCPBG00000002804	-	99	47.037	ENSONIG00000004463	zgc:162396	99	47.037	Oreochromis_niloticus
ENSCPBG00000002804	-	100	60.517	ENSOANG00000021828	-	95	65.816	Ornithorhynchus_anatinus
ENSCPBG00000002804	-	65	55.280	ENSOANG00000015675	-	99	55.280	Ornithorhynchus_anatinus
ENSCPBG00000002804	-	64	47.482	ENSORLG00000018107	zgc:162396	97	50.685	Oryzias_latipes
ENSCPBG00000002804	-	99	46.667	ENSORLG00015008543	zgc:162396	99	46.667	Oryzias_latipes_hsok
ENSCPBG00000002804	-	99	46.296	ENSOMEG00000010640	zgc:162396	98	48.731	Oryzias_melastigma
ENSCPBG00000002804	-	99	48.148	ENSPKIG00000014798	zgc:162396	99	48.148	Paramormyrops_kingsleyae
ENSCPBG00000002804	-	100	78.598	ENSPSIG00000016701	-	100	79.608	Pelodiscus_sinensis
ENSCPBG00000002804	-	73	48.684	ENSPMAG00000006166	zgc:162396	100	48.684	Petromyzon_marinus
ENSCPBG00000002804	-	81	44.390	ENSPMAG00000004744	zgc:162396	98	44.390	Petromyzon_marinus
ENSCPBG00000002804	-	91	35.950	ENSPMAG00000003743	zgc:162396	99	38.776	Petromyzon_marinus
ENSCPBG00000002804	-	99	44.444	ENSPFOG00000002666	zgc:162396	96	47.716	Poecilia_formosa
ENSCPBG00000002804	-	99	44.815	ENSPLAG00000010281	zgc:162396	96	48.223	Poecilia_latipinna
ENSCPBG00000002804	-	99	44.815	ENSPMEG00000002349	zgc:162396	96	48.223	Poecilia_mexicana
ENSCPBG00000002804	-	99	46.296	ENSPREG00000016491	zgc:162396	96	49.746	Poecilia_reticulata
ENSCPBG00000002804	-	99	47.601	ENSPNYG00000009858	zgc:162396	99	47.601	Pundamilia_nyererei
ENSCPBG00000002804	-	99	47.584	ENSPNAG00000026074	zgc:162396	99	47.584	Pygocentrus_nattereri
ENSCPBG00000002804	-	99	50.186	ENSPNAG00000004920	zgc:162396	99	50.186	Pygocentrus_nattereri
ENSCPBG00000002804	-	100	39.858	ENSSHAG00000000950	-	99	40.214	Sarcophilus_harrisii
ENSCPBG00000002804	-	99	49.442	ENSSFOG00015023503	zgc:162396	99	49.442	Scleropages_formosus
ENSCPBG00000002804	-	99	49.442	ENSSFOG00015023495	zgc:162396	99	49.442	Scleropages_formosus
ENSCPBG00000002804	-	99	47.407	ENSSMAG00000004484	zgc:162396	99	47.407	Scophthalmus_maximus
ENSCPBG00000002804	-	99	47.037	ENSSDUG00000010278	zgc:162396	99	47.037	Seriola_dumerili
ENSCPBG00000002804	-	99	47.407	ENSSLDG00000021423	zgc:162396	99	47.407	Seriola_lalandi_dorsalis
ENSCPBG00000002804	-	99	67.528	ENSSPUG00000015532	-	85	67.528	Sphenodon_punctatus
ENSCPBG00000002804	-	99	48.249	ENSSPAG00000005505	zgc:162396	99	48.438	Stegastes_partitus
ENSCPBG00000002804	-	68	60.694	ENSTGUG00000015044	-	99	61.538	Taeniopygia_guttata
ENSCPBG00000002804	-	98	60.236	ENSTGUG00000003861	-	100	60.236	Taeniopygia_guttata
ENSCPBG00000002804	-	98	44.488	ENSTRUG00000010648	-	96	47.739	Takifugu_rubripes
ENSCPBG00000002804	-	97	43.874	ENSTRUG00000007506	zgc:162396	94	50.000	Takifugu_rubripes
ENSCPBG00000002804	-	99	43.911	ENSTNIG00000001485	zgc:162396	95	48.485	Tetraodon_nigroviridis
ENSCPBG00000002804	-	99	45.756	ENSXETG00000033236	-	97	45.756	Xenopus_tropicalis
ENSCPBG00000002804	-	99	44.815	ENSXCOG00000014529	zgc:162396	96	48.731	Xiphophorus_couchianus
ENSCPBG00000002804	-	99	44.815	ENSXMAG00000023129	zgc:162396	96	48.731	Xiphophorus_maculatus