EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000003465 (Gene tree)
Gene ID: 101953812
Gene Symbol: ATXN2
Alias: ATX2|SCA2|TNRC13
Full Name: ataxin 2
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 57898 bases
Position: chrKK088219.1:10086902-10144799
Accession: 10555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000004269	PAM2	PF07145.15	2.4e-06	1	1
ENSCPBP00000004269	LsmAD	PF06741.13	1.2e-15	1	1
ENSCPBP00000004269	SM-ATX	PF14438.6	7.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000005210	ATXN2-201	2988	XM_024101472	ENSCPBP00000004269	986 (aa)	XP_023957240	UPI000CE637BB

Gene Model

Click here to download ENSCPBG00000003465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000003465's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000003465	ATXN2	92	41.949	ENSCPBG00000003859	ATXN2L	85	40.788

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000003465	ATXN2	100	76.705	ENSG00000204842	ATXN2	93	100.000	Homo_sapiens
ENSCPBG00000003465	ATXN2	100	59.444	ENSAPOG00000014663	atxn2	95	60.638	Acanthochromis_polyacanthus
ENSCPBG00000003465	ATXN2	99	60.039	ENSAOCG00000001107	atxn2	95	60.638	Amphiprion_ocellaris
ENSCPBG00000003465	ATXN2	100	59.595	ENSAPEG00000020250	atxn2	95	60.192	Amphiprion_percula
ENSCPBG00000003465	ATXN2	99	76.381	ENSANAG00000022522	ATXN2	100	74.561	Aotus_nancymaae
ENSCPBG00000003465	ATXN2	99	60.456	ENSAMXG00000002342	atxn2	95	60.335	Astyanax_mexicanus
ENSCPBG00000003465	ATXN2	100	77.083	ENSBTAG00000022069	ATXN2	100	77.178	Bos_taurus
ENSCPBG00000003465	ATXN2	100	72.727	ENSCJAG00000011756	ATXN2	100	72.633	Callithrix_jacchus
ENSCPBG00000003465	ATXN2	72	80.591	ENSCAFG00000008606	ATXN2	79	74.976	Canis_familiaris
ENSCPBG00000003465	ATXN2	100	76.799	ENSCHIG00000012141	ATXN2	81	71.604	Capra_hircus
ENSCPBG00000003465	ATXN2	100	76.705	ENSTSYG00000002717	ATXN2	100	75.372	Carlito_syrichta
ENSCPBG00000003465	ATXN2	69	82.379	ENSCAPG00000013332	ATXN2	100	80.910	Cavia_aperea
ENSCPBG00000003465	ATXN2	66	83.591	ENSCPOG00000001390	ATXN2	96	69.357	Cavia_porcellus
ENSCPBG00000003465	ATXN2	100	79.359	ENSCCAG00000026267	ATXN2	100	74.468	Cebus_capucinus
ENSCPBG00000003465	ATXN2	99	80.375	ENSCATG00000017877	ATXN2	100	72.443	Cercocebus_atys
ENSCPBG00000003465	ATXN2	100	75.947	ENSCLAG00000009324	ATXN2	96	75.568	Chinchilla_lanigera
ENSCPBG00000003465	ATXN2	100	76.610	ENSCSAG00000002590	ATXN2	91	76.231	Chlorocebus_sabaeus
ENSCPBG00000003465	ATXN2	80	77.823	ENSCHOG00000004284	ATXN2	78	77.823	Choloepus_hoffmanni
ENSCPBG00000003465	ATXN2	100	76.136	ENSCANG00000042302	ATXN2	100	74.191	Colobus_angolensis_palliatus
ENSCPBG00000003465	ATXN2	72	85.795	ENSCGRG00001022603	Atxn2	82	71.727	Cricetulus_griseus_chok1gshd
ENSCPBG00000003465	ATXN2	72	85.795	ENSCGRG00000015823	Atxn2	96	74.053	Cricetulus_griseus_crigri
ENSCPBG00000003465	ATXN2	100	57.390	ENSCSEG00000018366	atxn2	95	56.991	Cynoglossus_semilaevis
ENSCPBG00000003465	ATXN2	100	57.726	ENSCSEG00000009072	-	96	57.030	Cynoglossus_semilaevis
ENSCPBG00000003465	ATXN2	100	57.905	ENSCVAG00000020160	atxn2	88	68.198	Cyprinodon_variegatus
ENSCPBG00000003465	ATXN2	100	75.000	ENSDNOG00000015696	ATXN2	100	71.834	Dasypus_novemcinctus
ENSCPBG00000003465	ATXN2	99	68.112	ENSDORG00000000808	Atxn2	98	69.100	Dipodomys_ordii
ENSCPBG00000003465	ATXN2	55	90.873	ENSETEG00000005224	ATXN2	75	90.873	Echinops_telfairi
ENSCPBG00000003465	ATXN2	100	85.801	ENSEASG00005012077	ATXN2	98	86.308	Equus_asinus_asinus
ENSCPBG00000003465	ATXN2	78	86.159	ENSEEUG00000014635	-	71	86.159	Erinaceus_europaeus
ENSCPBG00000003465	ATXN2	99	57.696	ENSELUG00000019632	atxn2	94	57.483	Esox_lucius
ENSCPBG00000003465	ATXN2	100	75.189	ENSFALG00000009001	ATXN2	100	76.064	Ficedula_albicollis
ENSCPBG00000003465	ATXN2	100	75.663	ENSFDAG00000020942	ATXN2	98	72.642	Fukomys_damarensis
ENSCPBG00000003465	ATXN2	94	58.359	ENSFHEG00000019561	atxn2	92	58.091	Fundulus_heteroclitus
ENSCPBG00000003465	ATXN2	71	71.972	ENSGMOG00000007412	atxn2	92	57.783	Gadus_morhua
ENSCPBG00000003465	ATXN2	99	77.555	ENSGALG00000004625	ATXN2	98	75.263	Gallus_gallus
ENSCPBG00000003465	ATXN2	99	59.131	ENSGAFG00000003302	atxn2	94	58.187	Gambusia_affinis
ENSCPBG00000003465	ATXN2	100	98.479	ENSGAGG00000005014	ATXN2	100	98.479	Gopherus_agassizii
ENSCPBG00000003465	ATXN2	100	75.758	ENSGGOG00000002137	ATXN2	100	77.083	Gorilla_gorilla
ENSCPBG00000003465	ATXN2	99	59.687	ENSHBUG00000002921	atxn2	96	58.641	Haplochromis_burtoni
ENSCPBG00000003465	ATXN2	100	73.501	ENSHGLG00000009812	ATXN2	82	73.791	Heterocephalus_glaber_female
ENSCPBG00000003465	ATXN2	100	75.758	ENSHGLG00100019351	ATXN2	98	75.663	Heterocephalus_glaber_male
ENSCPBG00000003465	ATXN2	99	57.046	ENSHCOG00000005278	atxn2	92	56.851	Hippocampus_comes
ENSCPBG00000003465	ATXN2	100	57.436	ENSIPUG00000016649	atxn2	94	57.409	Ictalurus_punctatus
ENSCPBG00000003465	ATXN2	100	75.568	ENSSTOG00000000978	ATXN2	100	84.438	Ictidomys_tridecemlineatus
ENSCPBG00000003465	ATXN2	100	60.078	ENSKMAG00000000980	atxn2	95	59.981	Kryptolebias_marmoratus
ENSCPBG00000003465	ATXN2	61	53.035	ENSLBEG00000017484	atxn2	95	52.690	Labrus_bergylta
ENSCPBG00000003465	ATXN2	99	69.085	ENSLOCG00000007880	atxn2	94	68.688	Lepisosteus_oculatus
ENSCPBG00000003465	ATXN2	100	70.853	ENSLAFG00000007416	ATXN2	100	84.897	Loxodonta_africana
ENSCPBG00000003465	ATXN2	100	75.189	ENSMFAG00000000374	ATXN2	100	74.283	Macaca_fascicularis
ENSCPBG00000003465	ATXN2	100	76.610	ENSMMUG00000002226	ATXN2	100	76.705	Macaca_mulatta
ENSCPBG00000003465	ATXN2	100	75.758	ENSMNEG00000035588	ATXN2	100	74.283	Macaca_nemestrina
ENSCPBG00000003465	ATXN2	100	76.231	ENSMLEG00000024324	ATXN2	100	74.283	Mandrillus_leucophaeus
ENSCPBG00000003465	ATXN2	99	59.095	ENSMAMG00000019160	atxn2	93	59.784	Mastacembelus_armatus
ENSCPBG00000003465	ATXN2	99	59.687	ENSMZEG00005008476	atxn2	95	59.324	Maylandia_zebra
ENSCPBG00000003465	ATXN2	100	81.079	ENSMGAG00000005288	ATXN2	98	78.808	Meleagris_gallopavo
ENSCPBG00000003465	ATXN2	69	83.407	ENSMAUG00000008223	-	100	81.938	Mesocricetus_auratus
ENSCPBG00000003465	ATXN2	100	76.799	ENSMICG00000013541	ATXN2	100	85.714	Microcebus_murinus
ENSCPBG00000003465	ATXN2	69	82.819	ENSMOCG00000005219	Atxn2	100	81.057	Microtus_ochrogaster
ENSCPBG00000003465	ATXN2	79	70.588	ENSMMOG00000013189	atxn2	100	50.586	Mola_mola
ENSCPBG00000003465	ATXN2	99	59.310	ENSMALG00000018529	atxn2	94	58.030	Monopterus_albus
ENSCPBG00000003465	ATXN2	72	85.434	MGP_CAROLIEiJ_G0027692	Atxn2	100	80.851	Mus_caroli
ENSCPBG00000003465	ATXN2	100	73.983	ENSMUSG00000042605	Atxn2	100	84.164	Mus_musculus
ENSCPBG00000003465	ATXN2	89	85.253	MGP_PahariEiJ_G0024272	Atxn2	100	83.724	Mus_pahari
ENSCPBG00000003465	ATXN2	100	74.102	MGP_SPRETEiJ_G0028690	Atxn2	100	84.480	Mus_spretus
ENSCPBG00000003465	ATXN2	100	75.947	ENSMLUG00000015559	ATXN2	98	75.473	Myotis_lucifugus
ENSCPBG00000003465	ATXN2	100	76.042	ENSNLEG00000000484	ATXN2	100	74.561	Nomascus_leucogenys
ENSCPBG00000003465	ATXN2	84	100.000	ENSMEUG00000012244	-	84	100.000	Notamacropus_eugenii
ENSCPBG00000003465	ATXN2	100	65.472	ENSOPRG00000014599	ATXN2	99	67.484	Ochotona_princeps
ENSCPBG00000003465	ATXN2	100	74.693	ENSODEG00000010798	ATXN2	100	74.032	Octodon_degus
ENSCPBG00000003465	ATXN2	72	89.451	ENSOANG00000004796	ATXN2	100	77.597	Ornithorhynchus_anatinus
ENSCPBG00000003465	ATXN2	100	73.868	ENSOCUG00000002855	ATXN2	65	83.567	Oryctolagus_cuniculus
ENSCPBG00000003465	ATXN2	99	57.632	ENSORLG00000003606	atxn2	94	69.565	Oryzias_latipes
ENSCPBG00000003465	ATXN2	99	57.507	ENSORLG00020000785	atxn2	94	57.605	Oryzias_latipes_hni
ENSCPBG00000003465	ATXN2	99	57.692	ENSORLG00015012345	atxn2	94	58.049	Oryzias_latipes_hsok
ENSCPBG00000003465	ATXN2	99	58.505	ENSOMEG00000020080	atxn2	95	57.905	Oryzias_melastigma
ENSCPBG00000003465	ATXN2	100	75.947	ENSOGAG00000000609	ATXN2	81	69.151	Otolemur_garnettii
ENSCPBG00000003465	ATXN2	100	77.178	ENSOARG00000018223	ATXN2	98	77.273	Ovis_aries
ENSCPBG00000003465	ATXN2	100	76.610	ENSPPAG00000028043	ATXN2	100	76.420	Pan_paniscus
ENSCPBG00000003465	ATXN2	100	76.705	ENSPTRG00000029540	ATXN2	100	76.515	Pan_troglodytes
ENSCPBG00000003465	ATXN2	100	75.568	ENSPANG00000017168	ATXN2	100	74.283	Papio_anubis
ENSCPBG00000003465	ATXN2	100	62.106	ENSPKIG00000023134	atxn2	94	61.762	Paramormyrops_kingsleyae
ENSCPBG00000003465	ATXN2	100	70.934	ENSPMGG00000005074	atxn2	100	49.729	Periophthalmus_magnuspinnatus
ENSCPBG00000003465	ATXN2	69	83.407	ENSPEMG00000015340	Atxn2	100	81.938	Peromyscus_maniculatus_bairdii
ENSCPBG00000003465	ATXN2	56	87.363	ENSPCIG00000006165	-	94	84.425	Phascolarctos_cinereus
ENSCPBG00000003465	ATXN2	100	58.967	ENSPLAG00000015241	atxn2	95	58.049	Poecilia_latipinna
ENSCPBG00000003465	ATXN2	100	59.454	ENSPMEG00000016681	atxn2	95	59.024	Poecilia_mexicana
ENSCPBG00000003465	ATXN2	100	59.883	ENSPREG00000014825	atxn2	95	59.162	Poecilia_reticulata
ENSCPBG00000003465	ATXN2	100	76.136	ENSPPYG00000004963	ATXN2	84	75.852	Pongo_abelii
ENSCPBG00000003465	ATXN2	99	75.429	ENSPCOG00000022031	ATXN2	99	73.909	Propithecus_coquereli
ENSCPBG00000003465	ATXN2	99	86.159	ENSPVAG00000013179	ATXN2	75	85.424	Pteropus_vampyrus
ENSCPBG00000003465	ATXN2	61	51.685	ENSPNYG00000016981	atxn2	78	62.637	Pundamilia_nyererei
ENSCPBG00000003465	ATXN2	100	61.019	ENSPNAG00000010889	atxn2	94	60.725	Pygocentrus_nattereri
ENSCPBG00000003465	ATXN2	100	74.078	ENSRNOG00000001256	Atxn2	97	75.497	Rattus_norvegicus
ENSCPBG00000003465	ATXN2	100	73.485	ENSRBIG00000039212	ATXN2	100	73.080	Rhinopithecus_bieti
ENSCPBG00000003465	ATXN2	100	76.231	ENSRROG00000031170	ATXN2	100	74.283	Rhinopithecus_roxellana
ENSCPBG00000003465	ATXN2	100	74.746	ENSSBOG00000031563	ATXN2	100	74.653	Saimiri_boliviensis_boliviensis
ENSCPBG00000003465	ATXN2	100	75.118	ENSSHAG00000007304	ATXN2	98	73.987	Sarcophilus_harrisii
ENSCPBG00000003465	ATXN2	100	55.159	ENSSFOG00015017229	atxn2	100	55.089	Scleropages_formosus
ENSCPBG00000003465	ATXN2	99	59.212	ENSSMAG00000004627	atxn2	95	73.010	Scophthalmus_maximus
ENSCPBG00000003465	ATXN2	100	59.182	ENSSDUG00000001223	atxn2	95	58.896	Seriola_dumerili
ENSCPBG00000003465	ATXN2	95	82.018	ENSSARG00000006291	ATXN2	80	95.343	Sorex_araneus
ENSCPBG00000003465	ATXN2	99	71.942	ENSSPAG00000000377	atxn2	93	59.863	Stegastes_partitus
ENSCPBG00000003465	ATXN2	100	86.217	ENSSSCG00000009834	ATXN2	91	86.004	Sus_scrofa
ENSCPBG00000003465	ATXN2	100	91.226	ENSTGUG00000006497	ATXN2	98	91.226	Taeniopygia_guttata
ENSCPBG00000003465	ATXN2	94	57.625	ENSTRUG00000016801	atxn2	100	51.367	Takifugu_rubripes
ENSCPBG00000003465	ATXN2	81	85.277	ENSTBEG00000001985	ATXN2	76	83.333	Tupaia_belangeri
ENSCPBG00000003465	ATXN2	90	96.324	ENSTTRG00000000952	ATXN2	74	96.324	Tursiops_truncatus
ENSCPBG00000003465	ATXN2	92	94.488	ENSVPAG00000005940	ATXN2	97	70.526	Vicugna_pacos
ENSCPBG00000003465	ATXN2	61	54.127	ENSXCOG00000010001	atxn2	99	54.849	Xiphophorus_couchianus
ENSCPBG00000003465	ATXN2	100	59.007	ENSXMAG00000003481	atxn2	95	58.674	Xiphophorus_maculatus