EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000003543 (Gene tree)
Gene ID: 101933762
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 76024 bases
Position: chr1:63486204-63562227
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000004355	Methyltransf_8	PF05148.15	0.00014	1	1
ENSCPBP00000004362	Methyltransf_8	PF05148.15	0.00014	1	1
ENSCPBP00000004366	Methyltransf_8	PF05148.15	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000005319	-	1677	-	ENSCPBP00000004355	453 (aa)	XP_005286672	UPI000389155E
ENSCPBT00000005326	-	1629	-	ENSCPBP00000004362	453 (aa)	XP_005286672	UPI000389155E
ENSCPBT00000005330	-	1601	-	ENSCPBP00000004366	466 (aa)	-	UPI000388D38C

Gene Model

Click here to download ENSCPBG00000003543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000003543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000003543	-	62	68.182	ENSCPBG00000025129	TRMT9B	64	68.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000003543	-	100	47.198	ENSAPOG00000021388	trmt9b	99	47.414	Acanthochromis_polyacanthus
ENSCPBG00000003543	-	100	46.253	ENSACIG00000004292	trmt9b	100	46.253	Amphilophus_citrinellus
ENSCPBG00000003543	-	100	47.122	ENSAOCG00000009292	trmt9b	99	47.335	Amphiprion_ocellaris
ENSCPBG00000003543	-	100	47.122	ENSAPEG00000009854	trmt9b	99	47.335	Amphiprion_percula
ENSCPBG00000003543	-	100	47.516	ENSATEG00000012676	trmt9b	100	48.069	Anabas_testudineus
ENSCPBG00000003543	-	100	47.097	ENSACLG00000000314	trmt9b	100	47.097	Astatotilapia_calliptera
ENSCPBG00000003543	-	100	46.957	ENSELUG00000001357	trmt9b	100	46.957	Esox_lucius
ENSCPBG00000003543	-	100	46.795	ENSFHEG00000011480	trmt9b	99	46.795	Fundulus_heteroclitus
ENSCPBG00000003543	-	100	45.098	ENSGMOG00000004443	trmt9b	100	45.316	Gadus_morhua
ENSCPBG00000003543	-	100	44.924	ENSGACG00000011506	trmt9b	92	70.000	Gasterosteus_aculeatus
ENSCPBG00000003543	-	100	47.097	ENSHBUG00000002295	trmt9b	99	47.097	Haplochromis_burtoni
ENSCPBG00000003543	-	100	46.171	ENSIPUG00000013917	kiaa1456	100	46.608	Ictalurus_punctatus
ENSCPBG00000003543	-	100	47.732	ENSKMAG00000007640	trmt9b	99	47.732	Kryptolebias_marmoratus
ENSCPBG00000003543	-	100	47.084	ENSLBEG00000002263	trmt9b	99	47.084	Labrus_bergylta
ENSCPBG00000003543	-	100	55.940	ENSLACG00000008143	trmt9b	100	55.940	Latimeria_chalumnae
ENSCPBG00000003543	-	100	51.844	ENSLOCG00000008334	trmt9b	100	51.844	Lepisosteus_oculatus
ENSCPBG00000003543	-	100	47.845	ENSMAMG00000010689	trmt9b	99	48.060	Mastacembelus_armatus
ENSCPBG00000003543	-	100	46.882	ENSMZEG00005011387	trmt9b	99	46.882	Maylandia_zebra
ENSCPBG00000003543	-	100	45.806	ENSMMOG00000015857	trmt9b	99	46.237	Mola_mola
ENSCPBG00000003543	-	100	46.908	ENSONIG00000005528	trmt9b	100	46.908	Oreochromis_niloticus
ENSCPBG00000003543	-	100	47.505	ENSORLG00000003826	trmt9b	99	47.505	Oryzias_latipes
ENSCPBG00000003543	-	100	47.505	ENSORLG00020012656	trmt9b	99	47.505	Oryzias_latipes_hni
ENSCPBG00000003543	-	100	47.072	ENSORLG00015016783	trmt9b	99	47.072	Oryzias_latipes_hsok
ENSCPBG00000003543	-	99	48.140	ENSOMEG00000002455	trmt9b	100	48.140	Oryzias_melastigma
ENSCPBG00000003543	-	100	46.795	ENSPFOG00000001551	trmt9b	99	46.795	Poecilia_formosa
ENSCPBG00000003543	-	100	46.795	ENSPLAG00000014962	trmt9b	99	46.795	Poecilia_latipinna
ENSCPBG00000003543	-	100	46.795	ENSPMEG00000001760	trmt9b	99	46.795	Poecilia_mexicana
ENSCPBG00000003543	-	100	47.391	ENSPREG00000012608	trmt9b	100	47.391	Poecilia_reticulata
ENSCPBG00000003543	-	100	47.097	ENSPNYG00000011729	trmt9b	100	47.097	Pundamilia_nyererei
ENSCPBG00000003543	-	100	46.739	ENSPNAG00000008215	trmt9b	100	46.943	Pygocentrus_nattereri
ENSCPBG00000003543	-	100	46.537	ENSSMAG00000006457	trmt9b	99	46.739	Scophthalmus_maximus
ENSCPBG00000003543	-	100	47.009	ENSSDUG00000011364	trmt9b	99	47.222	Seriola_dumerili
ENSCPBG00000003543	-	100	46.795	ENSSLDG00000005317	trmt9b	100	46.709	Seriola_lalandi_dorsalis
ENSCPBG00000003543	-	100	46.652	ENSSPAG00000013471	trmt9b	100	46.652	Stegastes_partitus
ENSCPBG00000003543	-	100	47.835	ENSTRUG00000006224	trmt9b	99	47.835	Takifugu_rubripes
ENSCPBG00000003543	-	99	46.288	ENSTNIG00000016262	trmt9b	99	46.389	Tetraodon_nigroviridis
ENSCPBG00000003543	-	100	44.273	ENSXETG00000016909	trmt9b	100	44.273	Xenopus_tropicalis
ENSCPBG00000003543	-	100	46.957	ENSXCOG00000005471	trmt9b	100	46.957	Xiphophorus_couchianus
ENSCPBG00000003543	-	100	46.022	ENSXMAG00000006981	trmt9b	99	46.022	Xiphophorus_maculatus