EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000004030 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 153327 bases
Position: chrKK083211.1:263697-417023
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	1	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	2	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	3	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	4	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	5	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	6	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	7	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	8	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	9	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	10	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	11	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	12	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	13	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	14	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	15	16
ENSCPBP00000005048	zf-C2H2	PF00096.26	6.9e-103	16	16
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	1	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	2	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	3	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	4	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	5	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	6	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	7	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	8	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	9	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	10	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	11	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	12	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	13	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	14	15
ENSCPBP00000005019	zf-C2H2	PF00096.26	2.2e-97	15	15
ENSCPBP00000005031	zf-C2H2	PF00096.26	3.7e-72	1	12
ENSCPBP00000005031	zf-C2H2	PF00096.26	3.7e-72	2	12
ENSCPBP00000005031	zf-C2H2	PF00096.26	3.7e-72	3	12
ENSCPBP00000005031	zf-C2H2	PF00096.26	3.7e-72	4	12
ENSCPBP00000005031	zf-C2H2	PF00096.26	3.7e-72	5	12
ENSCPBP00000005031	zf-C2H2	PF00096.26	3.7e-72	6	12
ENSCPBP00000005031	zf-C2H2	PF00096.26	3.7e-72	7	12
ENSCPBP00000005031	zf-C2H2	PF00096.26	3.7e-72	8	12
ENSCPBP00000005031	zf-C2H2	PF00096.26	3.7e-72	9	12
ENSCPBP00000005031	zf-C2H2	PF00096.26	3.7e-72	10	12
ENSCPBP00000005031	zf-C2H2	PF00096.26	3.7e-72	11	12
ENSCPBP00000005031	zf-C2H2	PF00096.26	3.7e-72	12	12
ENSCPBP00000005066	zf-C2H2	PF00096.26	2.7e-62	1	11
ENSCPBP00000005066	zf-C2H2	PF00096.26	2.7e-62	2	11
ENSCPBP00000005066	zf-C2H2	PF00096.26	2.7e-62	3	11
ENSCPBP00000005066	zf-C2H2	PF00096.26	2.7e-62	4	11
ENSCPBP00000005066	zf-C2H2	PF00096.26	2.7e-62	5	11
ENSCPBP00000005066	zf-C2H2	PF00096.26	2.7e-62	6	11
ENSCPBP00000005066	zf-C2H2	PF00096.26	2.7e-62	7	11
ENSCPBP00000005066	zf-C2H2	PF00096.26	2.7e-62	8	11
ENSCPBP00000005066	zf-C2H2	PF00096.26	2.7e-62	9	11
ENSCPBP00000005066	zf-C2H2	PF00096.26	2.7e-62	10	11
ENSCPBP00000005066	zf-C2H2	PF00096.26	2.7e-62	11	11
ENSCPBP00000005041	zf-C2H2	PF00096.26	4.4e-61	1	10
ENSCPBP00000005041	zf-C2H2	PF00096.26	4.4e-61	2	10
ENSCPBP00000005041	zf-C2H2	PF00096.26	4.4e-61	3	10
ENSCPBP00000005041	zf-C2H2	PF00096.26	4.4e-61	4	10
ENSCPBP00000005041	zf-C2H2	PF00096.26	4.4e-61	5	10
ENSCPBP00000005041	zf-C2H2	PF00096.26	4.4e-61	6	10
ENSCPBP00000005041	zf-C2H2	PF00096.26	4.4e-61	7	10
ENSCPBP00000005041	zf-C2H2	PF00096.26	4.4e-61	8	10
ENSCPBP00000005041	zf-C2H2	PF00096.26	4.4e-61	9	10
ENSCPBP00000005041	zf-C2H2	PF00096.26	4.4e-61	10	10
ENSCPBP00000005052	zf-C2H2	PF00096.26	3.7e-56	1	9
ENSCPBP00000005052	zf-C2H2	PF00096.26	3.7e-56	2	9
ENSCPBP00000005052	zf-C2H2	PF00096.26	3.7e-56	3	9
ENSCPBP00000005052	zf-C2H2	PF00096.26	3.7e-56	4	9
ENSCPBP00000005052	zf-C2H2	PF00096.26	3.7e-56	5	9
ENSCPBP00000005052	zf-C2H2	PF00096.26	3.7e-56	6	9
ENSCPBP00000005052	zf-C2H2	PF00096.26	3.7e-56	7	9
ENSCPBP00000005052	zf-C2H2	PF00096.26	3.7e-56	8	9
ENSCPBP00000005052	zf-C2H2	PF00096.26	3.7e-56	9	9
ENSCPBP00000005048	zf-met	PF12874.7	1.9e-14	1	1
ENSCPBP00000005019	zf-met	PF12874.7	4.8e-13	1	1
ENSCPBP00000005066	zf-met	PF12874.7	8.3e-09	1	1
ENSCPBP00000005052	zf-met	PF12874.7	3.8e-08	1	1
ENSCPBP00000005041	zf-met	PF12874.7	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000006178	-	1290	-	ENSCPBP00000005066	429 (aa)	-	-
ENSCPBT00000006146	-	1905	-	ENSCPBP00000005048	634 (aa)	-	-
ENSCPBT00000006123	-	1470	-	ENSCPBP00000005031	489 (aa)	-	-
ENSCPBT00000006155	-	1299	-	ENSCPBP00000005052	432 (aa)	-	-
ENSCPBT00000006159	-	411	-	ENSCPBP00000005056	136 (aa)	-	-
ENSCPBT00000006138	-	1329	-	ENSCPBP00000005041	442 (aa)	-	-
ENSCPBT00000006110	-	2073	-	ENSCPBP00000005019	690 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000004030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000004030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000004030	-	98	69.655	ENSCPBG00000021479	-	99	69.655
ENSCPBG00000004030	-	87	43.771	ENSCPBG00000013652	-	70	43.771
ENSCPBG00000004030	-	88	58.015	ENSCPBG00000015987	-	85	57.812
ENSCPBG00000004030	-	79	65.942	ENSCPBG00000005703	-	54	65.992
ENSCPBG00000004030	-	99	63.983	ENSCPBG00000015500	-	99	63.039
ENSCPBG00000004030	-	99	64.865	ENSCPBG00000003130	-	98	72.273
ENSCPBG00000004030	-	98	52.792	ENSCPBG00000002063	-	82	52.792
ENSCPBG00000004030	-	83	67.500	ENSCPBG00000026433	-	96	64.151
ENSCPBG00000004030	-	100	58.803	ENSCPBG00000021487	-	93	61.029
ENSCPBG00000004030	-	87	47.059	ENSCPBG00000023415	GZF1	54	42.215
ENSCPBG00000004030	-	100	68.647	ENSCPBG00000017494	-	99	66.975
ENSCPBG00000004030	-	92	68.132	ENSCPBG00000001258	-	98	68.132
ENSCPBG00000004030	-	81	35.197	ENSCPBG00000028270	ZBTB41	50	34.706
ENSCPBG00000004030	-	87	52.553	ENSCPBG00000005586	-	76	52.553
ENSCPBG00000004030	-	82	39.560	ENSCPBG00000026947	ZNF319	93	41.892
ENSCPBG00000004030	-	99	71.978	ENSCPBG00000001181	-	99	71.772
ENSCPBG00000004030	-	88	66.269	ENSCPBG00000017489	-	99	65.046
ENSCPBG00000004030	-	85	62.109	ENSCPBG00000009609	-	96	63.333
ENSCPBG00000004030	-	99	64.231	ENSCPBG00000004990	-	100	62.950
ENSCPBG00000004030	-	88	84.615	ENSCPBG00000012976	-	99	71.749
ENSCPBG00000004030	-	98	73.745	ENSCPBG00000002430	-	98	67.619
ENSCPBG00000004030	-	90	63.529	ENSCPBG00000001421	-	99	66.952
ENSCPBG00000004030	-	82	44.444	ENSCPBG00000004542	ZNF865	92	39.216
ENSCPBG00000004030	-	92	45.522	ENSCPBG00000008580	-	100	49.180
ENSCPBG00000004030	-	78	47.586	ENSCPBG00000009849	-	87	50.000
ENSCPBG00000004030	-	82	57.068	ENSCPBG00000002014	-	62	59.633
ENSCPBG00000004030	-	79	52.381	ENSCPBG00000001526	-	80	52.381
ENSCPBG00000004030	-	92	38.281	ENSCPBG00000024735	PRDM5	86	38.158
ENSCPBG00000004030	-	100	65.455	ENSCPBG00000003774	-	83	83.333
ENSCPBG00000004030	-	99	68.217	ENSCPBG00000001272	-	99	68.217
ENSCPBG00000004030	-	79	44.560	ENSCPBG00000023418	-	61	42.143
ENSCPBG00000004030	-	78	46.734	ENSCPBG00000005715	ZBTB49	50	46.734
ENSCPBG00000004030	-	97	70.408	ENSCPBG00000016841	-	98	78.049

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000004030	-	82	60.000	ENSAMXG00000029161	-	81	62.903	Astyanax_mexicanus
ENSCPBG00000004030	-	99	65.882	ENSGAGG00000002214	-	100	65.882	Gopherus_agassizii
ENSCPBG00000004030	-	93	88.095	ENSGAGG00000020134	-	74	88.095	Gopherus_agassizii
ENSCPBG00000004030	-	99	64.935	ENSGAGG00000001645	-	98	64.935	Gopherus_agassizii
ENSCPBG00000004030	-	99	61.832	ENSGAGG00000002179	-	100	61.628	Gopherus_agassizii
ENSCPBG00000004030	-	88	65.054	ENSGAGG00000016529	-	99	67.742	Gopherus_agassizii
ENSCPBG00000004030	-	86	59.036	ENSGAGG00000018445	-	99	58.730	Gopherus_agassizii
ENSCPBG00000004030	-	99	62.214	ENSGAGG00000009272	-	97	65.000	Gopherus_agassizii
ENSCPBG00000004030	-	89	86.364	ENSGAGG00000010324	-	95	64.014	Gopherus_agassizii
ENSCPBG00000004030	-	97	72.813	ENSGAGG00000014356	-	91	72.813	Gopherus_agassizii
ENSCPBG00000004030	-	100	61.513	ENSGAGG00000011487	-	99	61.056	Gopherus_agassizii
ENSCPBG00000004030	-	99	73.010	ENSGAGG00000010833	-	98	74.336	Gopherus_agassizii
ENSCPBG00000004030	-	95	69.828	ENSGAGG00000012452	-	94	69.828	Gopherus_agassizii
ENSCPBG00000004030	-	99	64.151	ENSPSIG00000012865	-	99	64.729	Pelodiscus_sinensis
ENSCPBG00000004030	-	97	66.160	ENSPSIG00000009893	-	99	66.225	Pelodiscus_sinensis
ENSCPBG00000004030	-	81	59.908	ENSPSIG00000000522	-	98	59.908	Pelodiscus_sinensis
ENSCPBG00000004030	-	98	59.012	ENSPSIG00000015465	-	98	59.140	Pelodiscus_sinensis
ENSCPBG00000004030	-	85	63.019	ENSPSIG00000002569	-	91	62.679	Pelodiscus_sinensis
ENSCPBG00000004030	-	83	64.069	ENSPSIG00000015216	-	98	63.285	Pelodiscus_sinensis
ENSCPBG00000004030	-	88	60.920	ENSPSIG00000001026	-	97	55.949	Pelodiscus_sinensis
ENSCPBG00000004030	-	81	59.751	ENSTGUG00000016516	-	100	59.751	Taeniopygia_guttata
ENSCPBG00000004030	-	83	62.295	ENSTGUG00000018518	-	100	62.295	Taeniopygia_guttata
ENSCPBG00000004030	-	87	56.744	ENSTGUG00000013736	-	99	62.000	Taeniopygia_guttata
ENSCPBG00000004030	-	81	55.556	ENSTGUG00000015260	-	100	57.838	Taeniopygia_guttata
ENSCPBG00000004030	-	80	65.333	ENSTGUG00000018327	-	100	66.225	Taeniopygia_guttata
ENSCPBG00000004030	-	81	60.000	ENSTGUG00000014614	-	99	60.000	Taeniopygia_guttata
ENSCPBG00000004030	-	76	68.519	ENSTGUG00000018349	-	100	68.807	Taeniopygia_guttata
ENSCPBG00000004030	-	78	66.250	ENSTGUG00000018542	-	100	66.250	Taeniopygia_guttata
ENSCPBG00000004030	-	81	58.303	ENSTGUG00000016781	-	100	58.303	Taeniopygia_guttata
ENSCPBG00000004030	-	81	58.594	ENSTGUG00000016850	-	100	58.527	Taeniopygia_guttata
ENSCPBG00000004030	-	78	59.873	ENSTGUG00000018374	-	100	59.873	Taeniopygia_guttata
ENSCPBG00000004030	-	85	59.709	ENSTGUG00000014888	-	99	59.709	Taeniopygia_guttata
ENSCPBG00000004030	-	84	62.564	ENSTGUG00000018445	-	99	62.564	Taeniopygia_guttata