EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000004050 (Gene tree)
Gene ID: 101944137
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 21823 bases
Position: chrKK088222.1:17580084-17601906
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000005027	CAF1	PF04857.20	5.7e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000006118	PNLDC1-201	2652	-	ENSCPBP00000005027	508 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000004050's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000004050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000004050	PNLDC1	100	65.430	ENSG00000146453	PNLDC1	96	65.430	Homo_sapiens
ENSCPBG00000004050	PNLDC1	100	65.430	ENSAMEG00000015371	PNLDC1	96	65.430	Ailuropoda_melanoleuca
ENSCPBG00000004050	PNLDC1	95	71.721	ENSAPLG00000007014	PNLDC1	93	71.721	Anas_platyrhynchos
ENSCPBG00000004050	PNLDC1	100	66.339	ENSACAG00000013667	PNLDC1	96	66.339	Anolis_carolinensis
ENSCPBG00000004050	PNLDC1	100	64.648	ENSANAG00000034713	PNLDC1	100	64.648	Aotus_nancymaae
ENSCPBG00000004050	PNLDC1	95	67.967	ENSBTAG00000015166	PNLDC1	92	67.967	Bos_taurus
ENSCPBG00000004050	PNLDC1	100	64.062	ENSCJAG00000011865	PNLDC1	95	65.226	Callithrix_jacchus
ENSCPBG00000004050	PNLDC1	100	66.211	ENSCAFG00000000740	PNLDC1	96	66.211	Canis_familiaris
ENSCPBG00000004050	PNLDC1	100	65.039	ENSCAFG00020017742	PNLDC1	93	68.153	Canis_lupus_dingo
ENSCPBG00000004050	PNLDC1	100	65.703	ENSCHIG00000003141	PNLDC1	96	65.511	Capra_hircus
ENSCPBG00000004050	PNLDC1	100	65.039	ENSTSYG00000005606	PNLDC1	96	65.039	Carlito_syrichta
ENSCPBG00000004050	PNLDC1	100	47.683	ENSCAPG00000011893	PNLDC1	96	47.683	Cavia_aperea
ENSCPBG00000004050	PNLDC1	100	60.234	ENSCPOG00000019565	PNLDC1	96	60.234	Cavia_porcellus
ENSCPBG00000004050	PNLDC1	100	64.258	ENSCCAG00000026232	PNLDC1	96	64.258	Cebus_capucinus
ENSCPBG00000004050	PNLDC1	100	65.625	ENSCATG00000033196	PNLDC1	96	65.625	Cercocebus_atys
ENSCPBG00000004050	PNLDC1	100	65.820	ENSCLAG00000003228	PNLDC1	96	65.820	Chinchilla_lanigera
ENSCPBG00000004050	PNLDC1	97	65.130	ENSCSAG00000012478	PNLDC1	95	64.529	Chlorocebus_sabaeus
ENSCPBG00000004050	PNLDC1	97	66.132	ENSCANG00000043076	PNLDC1	96	66.132	Colobus_angolensis_palliatus
ENSCPBG00000004050	PNLDC1	100	51.267	ENSCGRG00001011981	-	95	50.292	Cricetulus_griseus_chok1gshd
ENSCPBG00000004050	PNLDC1	100	63.477	ENSCGRG00001007470	-	96	63.477	Cricetulus_griseus_chok1gshd
ENSCPBG00000004050	PNLDC1	100	52.632	ENSCGRG00000003103	-	95	51.657	Cricetulus_griseus_crigri
ENSCPBG00000004050	PNLDC1	100	63.477	ENSCGRG00000010221	-	96	63.477	Cricetulus_griseus_crigri
ENSCPBG00000004050	PNLDC1	100	66.862	ENSDNOG00000013709	PNLDC1	96	66.862	Dasypus_novemcinctus
ENSCPBG00000004050	PNLDC1	100	60.429	ENSDORG00000011517	Pnldc1	99	64.423	Dipodomys_ordii
ENSCPBG00000004050	PNLDC1	95	60.288	ENSETEG00000007587	PNLDC1	98	60.288	Echinops_telfairi
ENSCPBG00000004050	PNLDC1	100	61.628	ENSEASG00005019029	PNLDC1	96	60.811	Equus_asinus_asinus
ENSCPBG00000004050	PNLDC1	100	66.602	ENSECAG00000012898	PNLDC1	96	66.602	Equus_caballus
ENSCPBG00000004050	PNLDC1	70	62.500	ENSEEUG00000005717	-	85	62.500	Erinaceus_europaeus
ENSCPBG00000004050	PNLDC1	100	67.188	ENSFCAG00000002848	PNLDC1	96	67.188	Felis_catus
ENSCPBG00000004050	PNLDC1	94	68.116	ENSFALG00000012081	PNLDC1	96	68.116	Ficedula_albicollis
ENSCPBG00000004050	PNLDC1	100	64.648	ENSFDAG00000021334	PNLDC1	96	64.648	Fukomys_damarensis
ENSCPBG00000004050	PNLDC1	84	66.667	ENSGALG00000011624	PNLDC1	85	66.667	Gallus_gallus
ENSCPBG00000004050	PNLDC1	100	96.260	ENSGAGG00000015276	PNLDC1	100	96.667	Gopherus_agassizii
ENSCPBG00000004050	PNLDC1	100	65.039	ENSGGOG00000014077	PNLDC1	96	65.039	Gorilla_gorilla
ENSCPBG00000004050	PNLDC1	100	65.625	ENSHGLG00000006889	PNLDC1	96	65.625	Heterocephalus_glaber_female
ENSCPBG00000004050	PNLDC1	100	65.625	ENSHGLG00100018275	PNLDC1	96	65.625	Heterocephalus_glaber_male
ENSCPBG00000004050	PNLDC1	100	66.406	ENSSTOG00000005595	PNLDC1	96	66.406	Ictidomys_tridecemlineatus
ENSCPBG00000004050	PNLDC1	100	60.742	ENSJJAG00000009937	Pnldc1	96	60.742	Jaculus_jaculus
ENSCPBG00000004050	PNLDC1	61	65.506	ENSLAFG00000030189	PNLDC1	92	65.506	Loxodonta_africana
ENSCPBG00000004050	PNLDC1	100	65.820	ENSMFAG00000041296	PNLDC1	96	65.820	Macaca_fascicularis
ENSCPBG00000004050	PNLDC1	100	65.820	ENSMMUG00000004181	PNLDC1	96	65.820	Macaca_mulatta
ENSCPBG00000004050	PNLDC1	100	65.625	ENSMNEG00000034271	PNLDC1	96	65.625	Macaca_nemestrina
ENSCPBG00000004050	PNLDC1	100	62.891	ENSMLEG00000044059	PNLDC1	96	62.109	Mandrillus_leucophaeus
ENSCPBG00000004050	PNLDC1	95	69.628	ENSMGAG00000012470	PNLDC1	93	69.628	Meleagris_gallopavo
ENSCPBG00000004050	PNLDC1	100	54.883	ENSMAUG00000012298	Pnldc1	96	54.883	Mesocricetus_auratus
ENSCPBG00000004050	PNLDC1	100	64.648	ENSMICG00000008021	PNLDC1	96	64.648	Microcebus_murinus
ENSCPBG00000004050	PNLDC1	100	64.922	ENSMOCG00000014287	Pnldc1	96	64.147	Microtus_ochrogaster
ENSCPBG00000004050	PNLDC1	100	70.898	ENSMODG00000007420	PNLDC1	96	70.898	Monodelphis_domestica
ENSCPBG00000004050	PNLDC1	100	65.234	MGP_CAROLIEiJ_G0021045	Pnldc1	96	65.234	Mus_caroli
ENSCPBG00000004050	PNLDC1	100	65.625	ENSMUSG00000073460	Pnldc1	99	66.349	Mus_musculus
ENSCPBG00000004050	PNLDC1	100	65.625	MGP_PahariEiJ_G0023361	Pnldc1	96	65.625	Mus_pahari
ENSCPBG00000004050	PNLDC1	100	65.625	MGP_SPRETEiJ_G0021975	Pnldc1	96	65.625	Mus_spretus
ENSCPBG00000004050	PNLDC1	100	66.211	ENSMPUG00000004920	PNLDC1	96	66.211	Mustela_putorius_furo
ENSCPBG00000004050	PNLDC1	100	66.992	ENSMLUG00000000747	PNLDC1	96	66.992	Myotis_lucifugus
ENSCPBG00000004050	PNLDC1	100	65.625	ENSNGAG00000017714	Pnldc1	96	65.625	Nannospalax_galili
ENSCPBG00000004050	PNLDC1	97	65.331	ENSNLEG00000011282	PNLDC1	95	65.392	Nomascus_leucogenys
ENSCPBG00000004050	PNLDC1	63	57.009	ENSMEUG00000011926	-	64	57.009	Notamacropus_eugenii
ENSCPBG00000004050	PNLDC1	56	62.630	ENSMEUG00000014042	-	100	62.630	Notamacropus_eugenii
ENSCPBG00000004050	PNLDC1	79	63.966	ENSOPRG00000003813	PNLDC1	75	63.966	Ochotona_princeps
ENSCPBG00000004050	PNLDC1	100	65.234	ENSODEG00000008047	PNLDC1	96	65.234	Octodon_degus
ENSCPBG00000004050	PNLDC1	94	56.315	ENSOANG00000012199	PNLDC1	96	56.445	Ornithorhynchus_anatinus
ENSCPBG00000004050	PNLDC1	100	66.406	ENSOCUG00000013867	PNLDC1	96	66.406	Oryctolagus_cuniculus
ENSCPBG00000004050	PNLDC1	100	66.016	ENSOGAG00000007331	PNLDC1	97	66.016	Otolemur_garnettii
ENSCPBG00000004050	PNLDC1	100	66.016	ENSOARG00000004585	PNLDC1	96	64.933	Ovis_aries
ENSCPBG00000004050	PNLDC1	100	64.844	ENSPPAG00000026651	PNLDC1	96	64.844	Pan_paniscus
ENSCPBG00000004050	PNLDC1	100	67.383	ENSPPRG00000012854	PNLDC1	96	67.383	Panthera_pardus
ENSCPBG00000004050	PNLDC1	99	64.244	ENSPTIG00000011501	PNLDC1	95	64.244	Panthera_tigris_altaica
ENSCPBG00000004050	PNLDC1	100	64.844	ENSPTRG00000018762	PNLDC1	96	64.844	Pan_troglodytes
ENSCPBG00000004050	PNLDC1	100	65.625	ENSPANG00000022009	PNLDC1	96	65.625	Papio_anubis
ENSCPBG00000004050	PNLDC1	50	91.765	ENSPSIG00000011419	PNLDC1	86	91.765	Pelodiscus_sinensis
ENSCPBG00000004050	PNLDC1	100	65.820	ENSPEMG00000016301	Pnldc1	96	65.820	Peromyscus_maniculatus_bairdii
ENSCPBG00000004050	PNLDC1	85	72.055	ENSPCIG00000023412	PNLDC1	98	72.055	Phascolarctos_cinereus
ENSCPBG00000004050	PNLDC1	100	60.735	ENSPPYG00000017148	PNLDC1	96	60.735	Pongo_abelii
ENSCPBG00000004050	PNLDC1	100	59.570	ENSPCAG00000014169	PNLDC1	96	59.570	Procavia_capensis
ENSCPBG00000004050	PNLDC1	100	64.844	ENSPCOG00000025722	PNLDC1	96	64.844	Propithecus_coquereli
ENSCPBG00000004050	PNLDC1	75	69.610	ENSPVAG00000005325	PNLDC1	70	69.437	Pteropus_vampyrus
ENSCPBG00000004050	PNLDC1	100	65.625	ENSRNOG00000023140	Pnldc1	100	62.112	Rattus_norvegicus
ENSCPBG00000004050	PNLDC1	100	66.016	ENSRBIG00000033806	PNLDC1	96	66.016	Rhinopithecus_bieti
ENSCPBG00000004050	PNLDC1	97	66.333	ENSRROG00000043919	PNLDC1	96	66.333	Rhinopithecus_roxellana
ENSCPBG00000004050	PNLDC1	100	64.648	ENSSBOG00000019135	PNLDC1	96	64.648	Saimiri_boliviensis_boliviensis
ENSCPBG00000004050	PNLDC1	96	70.791	ENSSHAG00000015192	PNLDC1	94	70.791	Sarcophilus_harrisii
ENSCPBG00000004050	PNLDC1	56	83.688	ENSSPUG00000004627	PNLDC1	100	81.696	Sphenodon_punctatus
ENSCPBG00000004050	PNLDC1	95	65.369	ENSSSCG00000004046	PNLDC1	95	65.102	Sus_scrofa
ENSCPBG00000004050	PNLDC1	91	69.032	ENSTGUG00000011418	PNLDC1	96	69.032	Taeniopygia_guttata
ENSCPBG00000004050	PNLDC1	95	57.906	ENSTBEG00000009131	PNLDC1	93	57.906	Tupaia_belangeri
ENSCPBG00000004050	PNLDC1	75	64.844	ENSTTRG00000010409	PNLDC1	70	64.343	Tursiops_truncatus
ENSCPBG00000004050	PNLDC1	100	55.449	ENSUAMG00000015783	PNLDC1	96	55.577	Ursus_americanus
ENSCPBG00000004050	PNLDC1	95	61.460	ENSUMAG00000011903	PNLDC1	96	61.633	Ursus_maritimus
ENSCPBG00000004050	PNLDC1	100	66.211	ENSVVUG00000006586	PNLDC1	95	67.308	Vulpes_vulpes