EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000004310 (Gene tree)
Gene ID: 101933767
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 9234 bases
Position: chrKK082956.1:4143948-4153181
Accession: 14264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000005385	Gar1	PF04410.14	1.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000006547	GAR1-201	2682	-	ENSCPBP00000005385	198 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000004310's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000004310's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000004310	GAR1	54	93.396	ENSAPOG00000019754	gar1	50	93.396	Acanthochromis_polyacanthus
ENSCPBG00000004310	GAR1	69	77.372	ENSAMEG00000004605	GAR1	52	91.509	Ailuropoda_melanoleuca
ENSCPBG00000004310	GAR1	54	93.396	ENSAOCG00000020947	gar1	50	93.396	Amphiprion_ocellaris
ENSCPBG00000004310	GAR1	54	93.396	ENSAPEG00000001676	gar1	50	93.396	Amphiprion_percula
ENSCPBG00000004310	GAR1	54	93.396	ENSATEG00000003733	gar1	50	93.396	Anabas_testudineus
ENSCPBG00000004310	GAR1	54	94.393	ENSAPLG00000010926	GAR1	59	94.393	Anas_platyrhynchos
ENSCPBG00000004310	GAR1	54	91.589	ENSACAG00000010031	GAR1	50	91.589	Anolis_carolinensis
ENSCPBG00000004310	GAR1	55	90.826	ENSBTAG00000000748	GAR1	50	92.453	Bos_taurus
ENSCPBG00000004310	GAR1	68	78.358	ENSCAFG00020015566	GAR1	55	92.453	Canis_lupus_dingo
ENSCPBG00000004310	GAR1	76	77.333	ENSCHIG00000016026	-	51	92.453	Capra_hircus
ENSCPBG00000004310	GAR1	55	90.826	ENSTSYG00000013668	-	50	92.453	Carlito_syrichta
ENSCPBG00000004310	GAR1	55	82.569	ENSTSYG00000026632	-	72	72.535	Carlito_syrichta
ENSCPBG00000004310	GAR1	56	90.909	ENSCATG00000021854	GAR1	54	92.453	Cercocebus_atys
ENSCPBG00000004310	GAR1	56	90.000	ENSCLAG00000005335	GAR1	69	94.545	Chinchilla_lanigera
ENSCPBG00000004310	GAR1	54	91.589	ENSCSAG00000003922	GAR1	54	92.453	Chlorocebus_sabaeus
ENSCPBG00000004310	GAR1	54	92.453	ENSCVAG00000002103	gar1	51	92.453	Cyprinodon_variegatus
ENSCPBG00000004310	GAR1	55	89.908	ENSDNOG00000037632	GAR1	67	85.606	Dasypus_novemcinctus
ENSCPBG00000004310	GAR1	62	90.984	ENSEASG00005004658	GAR1	81	88.710	Equus_asinus_asinus
ENSCPBG00000004310	GAR1	62	90.164	ENSECAG00000013624	GAR1	81	87.903	Equus_caballus
ENSCPBG00000004310	GAR1	69	78.102	ENSFCAG00000040791	-	59	87.903	Felis_catus
ENSCPBG00000004310	GAR1	56	90.090	ENSFHEG00000008068	gar1	50	91.509	Fundulus_heteroclitus
ENSCPBG00000004310	GAR1	85	83.051	ENSGMOG00000012419	gar1	79	83.051	Gadus_morhua
ENSCPBG00000004310	GAR1	99	96.954	ENSGAGG00000004393	GAR1	98	96.954	Gopherus_agassizii
ENSCPBG00000004310	GAR1	56	72.072	ENSGGOG00000036205	-	53	73.585	Gorilla_gorilla
ENSCPBG00000004310	GAR1	60	92.437	ENSHGLG00000000493	GAR1	72	96.364	Heterocephalus_glaber_female
ENSCPBG00000004310	GAR1	56	90.000	ENSIPUG00000003194	gar1	60	82.540	Ictalurus_punctatus
ENSCPBG00000004310	GAR1	55	88.991	ENSSTOG00000005577	GAR1	71	94.545	Ictidomys_tridecemlineatus
ENSCPBG00000004310	GAR1	55	89.908	ENSJJAG00000010063	Gar1	58	86.047	Jaculus_jaculus
ENSCPBG00000004310	GAR1	56	88.288	ENSKMAG00000010402	gar1	50	90.566	Kryptolebias_marmoratus
ENSCPBG00000004310	GAR1	54	90.566	ENSLBEG00000015647	gar1	64	78.906	Labrus_bergylta
ENSCPBG00000004310	GAR1	80	89.474	ENSLACG00000003306	GAR1	86	85.156	Latimeria_chalumnae
ENSCPBG00000004310	GAR1	54	78.505	ENSMFAG00000003572	-	52	78.302	Macaca_fascicularis
ENSCPBG00000004310	GAR1	54	94.340	ENSMAUG00000016788	Gar1	70	96.364	Mesocricetus_auratus
ENSCPBG00000004310	GAR1	54	93.396	ENSMOCG00000001340	Gar1	70	96.364	Microtus_ochrogaster
ENSCPBG00000004310	GAR1	68	77.778	ENSMMOG00000004156	gar1	52	91.509	Mola_mola
ENSCPBG00000004310	GAR1	55	88.889	ENSMODG00000005897	GAR1	66	74.051	Monodelphis_domestica
ENSCPBG00000004310	GAR1	54	93.396	MGP_CAROLIEiJ_G0025627	Gar1	70	96.364	Mus_caroli
ENSCPBG00000004310	GAR1	56	90.909	ENSMUSG00000028010	Gar1	70	96.364	Mus_musculus
ENSCPBG00000004310	GAR1	56	90.909	MGP_PahariEiJ_G0027076	Gar1	70	96.364	Mus_pahari
ENSCPBG00000004310	GAR1	56	90.909	MGP_SPRETEiJ_G0026580	Gar1	70	96.364	Mus_spretus
ENSCPBG00000004310	GAR1	69	78.102	ENSMPUG00000008615	GAR1	59	87.903	Mustela_putorius_furo
ENSCPBG00000004310	GAR1	56	90.909	ENSNGAG00000008268	Gar1	71	94.545	Nannospalax_galili
ENSCPBG00000004310	GAR1	69	66.423	ENSNLEG00000034282	-	54	76.415	Nomascus_leucogenys
ENSCPBG00000004310	GAR1	69	77.372	ENSODEG00000011083	GAR1	55	91.509	Octodon_degus
ENSCPBG00000004310	GAR1	55	91.743	ENSOCUG00000003901	GAR1	79	88.333	Oryctolagus_cuniculus
ENSCPBG00000004310	GAR1	55	90.826	ENSOGAG00000004693	GAR1	50	92.453	Otolemur_garnettii
ENSCPBG00000004310	GAR1	76	77.333	ENSOARG00000004910	GAR1	50	92.453	Ovis_aries
ENSCPBG00000004310	GAR1	55	90.826	ENSPPAG00000014081	GAR1	53	92.453	Pan_paniscus
ENSCPBG00000004310	GAR1	69	78.102	ENSPPRG00000023697	GAR1	59	87.903	Panthera_pardus
ENSCPBG00000004310	GAR1	69	78.102	ENSPTIG00000021565	GAR1	59	87.903	Panthera_tigris_altaica
ENSCPBG00000004310	GAR1	56	90.909	ENSPTRG00000016364	GAR1	54	92.453	Pan_troglodytes
ENSCPBG00000004310	GAR1	69	64.706	ENSPTRG00000049340	-	50	75.472	Pan_troglodytes
ENSCPBG00000004310	GAR1	54	94.340	ENSPEMG00000015838	Gar1	70	96.364	Peromyscus_maniculatus_bairdii
ENSCPBG00000004310	GAR1	54	91.509	ENSPFOG00000024155	gar1	50	91.509	Poecilia_formosa
ENSCPBG00000004310	GAR1	54	91.509	ENSPLAG00000015056	gar1	50	91.509	Poecilia_latipinna
ENSCPBG00000004310	GAR1	54	92.453	ENSPMEG00000009320	gar1	51	92.453	Poecilia_mexicana
ENSCPBG00000004310	GAR1	78	80.165	ENSPCAG00000015897	GAR1	78	78.512	Procavia_capensis
ENSCPBG00000004310	GAR1	85	75.148	ENSPCOG00000027049	GAR1	54	92.453	Propithecus_coquereli
ENSCPBG00000004310	GAR1	54	94.393	ENSRNOG00000061146	Gar1	62	94.340	Rattus_norvegicus
ENSCPBG00000004310	GAR1	54	92.453	ENSRBIG00000019547	GAR1	54	92.453	Rhinopithecus_bieti
ENSCPBG00000004310	GAR1	57	75.000	ENSRBIG00000042411	-	51	75.472	Rhinopithecus_bieti
ENSCPBG00000004310	GAR1	56	90.909	ENSRROG00000028454	GAR1	54	92.453	Rhinopithecus_roxellana
ENSCPBG00000004310	GAR1	57	75.000	ENSRROG00000044348	-	51	75.472	Rhinopithecus_roxellana
ENSCPBG00000004310	GAR1	54	92.453	ENSSLDG00000023264	gar1	50	92.453	Seriola_lalandi_dorsalis
ENSCPBG00000004310	GAR1	64	90.840	ENSSPUG00000008707	GAR1	73	90.840	Sphenodon_punctatus
ENSCPBG00000004310	GAR1	79	90.164	ENSSSCG00000009137	GAR1	82	87.903	Sus_scrofa
ENSCPBG00000004310	GAR1	50	93.939	ENSTGUG00000004185	GAR1	67	93.939	Taeniopygia_guttata
ENSCPBG00000004310	GAR1	54	89.623	ENSTRUG00000020580	gar1	51	89.623	Takifugu_rubripes
ENSCPBG00000004310	GAR1	52	93.204	ENSTNIG00000013023	gar1	60	92.453	Tetraodon_nigroviridis
ENSCPBG00000004310	GAR1	68	78.358	ENSUAMG00000005652	GAR1	55	92.453	Ursus_americanus
ENSCPBG00000004310	GAR1	79	90.083	ENSUMAG00000000776	GAR1	68	87.903	Ursus_maritimus
ENSCPBG00000004310	GAR1	66	83.969	ENSVPAG00000009844	GAR1	72	87.903	Vicugna_pacos
ENSCPBG00000004310	GAR1	69	78.102	ENSVVUG00000017612	GAR1	64	87.903	Vulpes_vulpes