EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000004959 (Gene tree)
Gene ID: 101949253
Gene Symbol: CNOT4
Alias: CLONE243|NOT4|NOT4H
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 125101 bases
Position: chrKK088183.1:5594933-5720033
Accession: 7880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000006232	RRM_1	PF00076.22	1.6e-05	1	1
ENSCPBP00000006226	RRM_1	PF00076.22	1.7e-05	1	1
ENSCPBP00000006218	RRM_1	PF00076.22	1.7e-05	1	1
ENSCPBP00000006212	RRM_1	PF00076.22	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000007519	CNOT4-201	3681	XM_005305262	ENSCPBP00000006212	765 (aa)	XP_005305319	UPI000388E3E3
ENSCPBT00000007534	CNOT4-203	3525	XM_005305264	ENSCPBP00000006226	713 (aa)	XP_005305321	UPI000388CC26
ENSCPBT00000007526	CNOT4-202	3555	-	ENSCPBP00000006218	723 (aa)	-	-
ENSCPBT00000007540	CNOT4-204	3468	XM_005305266	ENSCPBP00000006232	694 (aa)	XP_005305323	UPI000388AE96

Gene Model

Click here to download ENSCPBG00000004959's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000004959's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000004959	CNOT4	100	96.073	ENSG00000080802	CNOT4	100	96.073	Homo_sapiens
ENSCPBG00000004959	CNOT4	93	89.299	ENSAPOG00000016272	cnot4a	87	89.299	Acanthochromis_polyacanthus
ENSCPBG00000004959	CNOT4	94	96.131	ENSAMEG00000012081	CNOT4	92	97.706	Ailuropoda_melanoleuca
ENSCPBG00000004959	CNOT4	100	69.619	ENSACIG00000003011	cnot4a	100	69.865	Amphilophus_citrinellus
ENSCPBG00000004959	CNOT4	99	89.299	ENSAOCG00000010792	cnot4a	91	89.299	Amphiprion_ocellaris
ENSCPBG00000004959	CNOT4	99	89.299	ENSAPEG00000004680	cnot4a	91	89.299	Amphiprion_percula
ENSCPBG00000004959	CNOT4	99	88.930	ENSATEG00000017580	cnot4a	91	88.930	Anabas_testudineus
ENSCPBG00000004959	CNOT4	100	97.255	ENSAPLG00000016441	CNOT4	100	97.255	Anas_platyrhynchos
ENSCPBG00000004959	CNOT4	100	95.294	ENSACAG00000011154	CNOT4	100	95.294	Anolis_carolinensis
ENSCPBG00000004959	CNOT4	100	95.933	ENSANAG00000032156	CNOT4	98	98.039	Aotus_nancymaae
ENSCPBG00000004959	CNOT4	99	89.299	ENSACLG00000002514	cnot4a	91	89.299	Astatotilapia_calliptera
ENSCPBG00000004959	CNOT4	100	70.093	ENSAMXG00000011473	cnot4b	100	70.798	Astyanax_mexicanus
ENSCPBG00000004959	CNOT4	100	71.429	ENSAMXG00000001373	cnot4a	100	70.844	Astyanax_mexicanus
ENSCPBG00000004959	CNOT4	100	95.512	ENSBTAG00000017919	CNOT4	100	95.512	Bos_taurus
ENSCPBG00000004959	CNOT4	100	95.933	ENSCJAG00000012532	CNOT4	100	95.933	Callithrix_jacchus
ENSCPBG00000004959	CNOT4	100	95.652	ENSCAFG00000003223	CNOT4	100	95.652	Canis_familiaris
ENSCPBG00000004959	CNOT4	100	86.744	ENSCAFG00020000093	CNOT4	94	96.494	Canis_lupus_dingo
ENSCPBG00000004959	CNOT4	100	95.652	ENSCHIG00000010955	CNOT4	100	95.652	Capra_hircus
ENSCPBG00000004959	CNOT4	100	95.792	ENSTSYG00000000893	CNOT4	100	95.792	Carlito_syrichta
ENSCPBG00000004959	CNOT4	100	92.286	ENSCAPG00000006213	CNOT4	100	92.286	Cavia_aperea
ENSCPBG00000004959	CNOT4	100	94.811	ENSCPOG00000011526	CNOT4	100	94.811	Cavia_porcellus
ENSCPBG00000004959	CNOT4	100	96.353	ENSCCAG00000024414	CNOT4	100	96.353	Cebus_capucinus
ENSCPBG00000004959	CNOT4	100	96.073	ENSCATG00000022607	CNOT4	100	96.073	Cercocebus_atys
ENSCPBG00000004959	CNOT4	100	95.091	ENSCLAG00000001857	CNOT4	100	95.091	Chinchilla_lanigera
ENSCPBG00000004959	CNOT4	100	95.652	ENSCSAG00000009096	CNOT4	100	95.652	Chlorocebus_sabaeus
ENSCPBG00000004959	CNOT4	68	99.465	ENSCHOG00000010412	CNOT4	65	99.465	Choloepus_hoffmanni
ENSCPBG00000004959	CNOT4	100	95.933	ENSCANG00000029319	CNOT4	100	95.933	Colobus_angolensis_palliatus
ENSCPBG00000004959	CNOT4	100	95.091	ENSCGRG00001014651	Cnot4	100	95.091	Cricetulus_griseus_chok1gshd
ENSCPBG00000004959	CNOT4	100	95.091	ENSCGRG00000005727	Cnot4	100	95.091	Cricetulus_griseus_crigri
ENSCPBG00000004959	CNOT4	95	89.299	ENSCSEG00000015080	cnot4a	88	89.299	Cynoglossus_semilaevis
ENSCPBG00000004959	CNOT4	99	89.299	ENSCVAG00000009399	cnot4a	100	70.156	Cyprinodon_variegatus
ENSCPBG00000004959	CNOT4	99	94.340	ENSDARG00000007639	cnot4b	91	94.340	Danio_rerio
ENSCPBG00000004959	CNOT4	100	70.647	ENSDARG00000007045	cnot4a	100	71.020	Danio_rerio
ENSCPBG00000004959	CNOT4	100	95.652	ENSDNOG00000009409	CNOT4	100	95.652	Dasypus_novemcinctus
ENSCPBG00000004959	CNOT4	100	94.951	ENSDORG00000012268	Cnot4	100	94.951	Dipodomys_ordii
ENSCPBG00000004959	CNOT4	100	90.743	ENSETEG00000013407	CNOT4	94	90.743	Echinops_telfairi
ENSCPBG00000004959	CNOT4	100	90.521	ENSEASG00005014430	CNOT4	100	90.521	Equus_asinus_asinus
ENSCPBG00000004959	CNOT4	100	95.512	ENSECAG00000020262	CNOT4	100	95.512	Equus_caballus
ENSCPBG00000004959	CNOT4	100	73.314	ENSELUG00000011540	cnot4b	100	66.256	Esox_lucius
ENSCPBG00000004959	CNOT4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSCPBG00000004959	CNOT4	100	95.512	ENSFCAG00000011904	CNOT4	100	95.512	Felis_catus
ENSCPBG00000004959	CNOT4	100	97.516	ENSFALG00000011194	CNOT4	100	97.516	Ficedula_albicollis
ENSCPBG00000004959	CNOT4	100	95.372	ENSFDAG00000013525	CNOT4	100	95.372	Fukomys_damarensis
ENSCPBG00000004959	CNOT4	99	89.299	ENSFHEG00000006608	cnot4a	100	69.101	Fundulus_heteroclitus
ENSCPBG00000004959	CNOT4	95	64.892	ENSGMOG00000001329	cnot4a	99	65.641	Gadus_morhua
ENSCPBG00000004959	CNOT4	100	97.335	ENSGALG00000011682	CNOT4	100	97.335	Gallus_gallus
ENSCPBG00000004959	CNOT4	100	71.084	ENSGACG00000004276	cnot4a	100	71.352	Gasterosteus_aculeatus
ENSCPBG00000004959	CNOT4	100	99.280	ENSGAGG00000017331	CNOT4	100	99.280	Gopherus_agassizii
ENSCPBG00000004959	CNOT4	96	91.908	ENSGGOG00000000142	CNOT4	97	97.514	Gorilla_gorilla
ENSCPBG00000004959	CNOT4	99	89.299	ENSHBUG00000000027	cnot4a	99	83.333	Haplochromis_burtoni
ENSCPBG00000004959	CNOT4	100	95.372	ENSHGLG00000011533	CNOT4	100	95.372	Heterocephalus_glaber_female
ENSCPBG00000004959	CNOT4	86	88.235	ENSHGLG00100013058	CNOT4	94	96.679	Heterocephalus_glaber_male
ENSCPBG00000004959	CNOT4	98	88.192	ENSHCOG00000015815	cnot4a	91	88.192	Hippocampus_comes
ENSCPBG00000004959	CNOT4	92	91.852	ENSIPUG00000006393	cnot4	99	91.852	Ictalurus_punctatus
ENSCPBG00000004959	CNOT4	100	68.287	ENSIPUG00000016994	cnot4b	100	69.193	Ictalurus_punctatus
ENSCPBG00000004959	CNOT4	100	95.372	ENSSTOG00000007717	CNOT4	100	95.372	Ictidomys_tridecemlineatus
ENSCPBG00000004959	CNOT4	86	69.748	ENSJJAG00000019991	-	94	78.967	Jaculus_jaculus
ENSCPBG00000004959	CNOT4	100	95.372	ENSJJAG00000016618	Cnot4	100	95.372	Jaculus_jaculus
ENSCPBG00000004959	CNOT4	94	89.299	ENSKMAG00000004581	cnot4a	84	89.299	Kryptolebias_marmoratus
ENSCPBG00000004959	CNOT4	99	89.668	ENSLBEG00000009999	cnot4a	91	89.668	Labrus_bergylta
ENSCPBG00000004959	CNOT4	100	90.948	ENSLACG00000002647	CNOT4	99	90.948	Latimeria_chalumnae
ENSCPBG00000004959	CNOT4	100	82.776	ENSLOCG00000016126	cnot4a	100	82.776	Lepisosteus_oculatus
ENSCPBG00000004959	CNOT4	100	95.512	ENSLAFG00000000709	CNOT4	100	95.512	Loxodonta_africana
ENSCPBG00000004959	CNOT4	100	95.652	ENSMFAG00000046349	CNOT4	100	95.652	Macaca_fascicularis
ENSCPBG00000004959	CNOT4	100	96.073	ENSMMUG00000016181	CNOT4	100	96.073	Macaca_mulatta
ENSCPBG00000004959	CNOT4	100	96.073	ENSMNEG00000042164	CNOT4	100	96.073	Macaca_nemestrina
ENSCPBG00000004959	CNOT4	100	96.073	ENSMLEG00000032709	CNOT4	100	96.073	Mandrillus_leucophaeus
ENSCPBG00000004959	CNOT4	99	89.299	ENSMAMG00000023194	cnot4a	91	89.299	Mastacembelus_armatus
ENSCPBG00000004959	CNOT4	99	89.299	ENSMZEG00005007312	cnot4a	91	89.299	Maylandia_zebra
ENSCPBG00000004959	CNOT4	100	96.863	ENSMGAG00000011788	CNOT4	100	96.863	Meleagris_gallopavo
ENSCPBG00000004959	CNOT4	100	94.951	ENSMAUG00000020415	Cnot4	100	94.951	Mesocricetus_auratus
ENSCPBG00000004959	CNOT4	100	96.353	ENSMICG00000001667	CNOT4	100	97.418	Microcebus_murinus
ENSCPBG00000004959	CNOT4	100	95.091	ENSMOCG00000020955	Cnot4	100	95.091	Microtus_ochrogaster
ENSCPBG00000004959	CNOT4	95	73.402	ENSMMOG00000014565	cnot4a	99	73.402	Mola_mola
ENSCPBG00000004959	CNOT4	100	96.774	ENSMODG00000014068	CNOT4	100	96.774	Monodelphis_domestica
ENSCPBG00000004959	CNOT4	93	89.299	ENSMALG00000011662	cnot4a	80	89.299	Monopterus_albus
ENSCPBG00000004959	CNOT4	100	94.406	MGP_CAROLIEiJ_G0028217	Cnot4	100	94.406	Mus_caroli
ENSCPBG00000004959	CNOT4	100	94.670	ENSMUSG00000038784	Cnot4	100	94.670	Mus_musculus
ENSCPBG00000004959	CNOT4	100	94.530	MGP_PahariEiJ_G0021974	Cnot4	100	94.530	Mus_pahari
ENSCPBG00000004959	CNOT4	100	94.530	MGP_SPRETEiJ_G0029216	Cnot4	100	94.530	Mus_spretus
ENSCPBG00000004959	CNOT4	100	95.652	ENSMPUG00000004089	CNOT4	100	95.652	Mustela_putorius_furo
ENSCPBG00000004959	CNOT4	100	89.193	ENSMLUG00000008260	CNOT4	100	89.193	Myotis_lucifugus
ENSCPBG00000004959	CNOT4	100	94.811	ENSNGAG00000015030	Cnot4	100	94.811	Nannospalax_galili
ENSCPBG00000004959	CNOT4	93	83.333	ENSNBRG00000021144	cnot4a	100	64.179	Neolamprologus_brichardi
ENSCPBG00000004959	CNOT4	100	95.792	ENSNLEG00000013352	CNOT4	100	95.792	Nomascus_leucogenys
ENSCPBG00000004959	CNOT4	82	93.931	ENSOPRG00000001023	CNOT4	82	93.451	Ochotona_princeps
ENSCPBG00000004959	CNOT4	100	94.811	ENSODEG00000012975	CNOT4	100	94.811	Octodon_degus
ENSCPBG00000004959	CNOT4	99	89.299	ENSONIG00000008656	cnot4a	91	89.299	Oreochromis_niloticus
ENSCPBG00000004959	CNOT4	100	96.084	ENSOANG00000005006	CNOT4	100	96.084	Ornithorhynchus_anatinus
ENSCPBG00000004959	CNOT4	100	95.792	ENSOCUG00000013448	CNOT4	100	95.792	Oryctolagus_cuniculus
ENSCPBG00000004959	CNOT4	100	69.008	ENSORLG00000003727	cnot4a	100	68.883	Oryzias_latipes
ENSCPBG00000004959	CNOT4	100	69.385	ENSORLG00020015684	cnot4a	100	69.221	Oryzias_latipes_hni
ENSCPBG00000004959	CNOT4	100	68.883	ENSORLG00015008470	cnot4a	100	68.883	Oryzias_latipes_hsok
ENSCPBG00000004959	CNOT4	100	68.645	ENSOMEG00000011084	cnot4a	100	68.627	Oryzias_melastigma
ENSCPBG00000004959	CNOT4	100	96.353	ENSOGAG00000015499	CNOT4	100	96.353	Otolemur_garnettii
ENSCPBG00000004959	CNOT4	100	95.792	ENSOARG00000008803	CNOT4	100	95.792	Ovis_aries
ENSCPBG00000004959	CNOT4	100	95.792	ENSPPAG00000041937	CNOT4	100	95.792	Pan_paniscus
ENSCPBG00000004959	CNOT4	100	95.933	ENSPPRG00000023940	CNOT4	100	95.933	Panthera_pardus
ENSCPBG00000004959	CNOT4	100	95.372	ENSPTIG00000016601	CNOT4	100	95.372	Panthera_tigris_altaica
ENSCPBG00000004959	CNOT4	100	95.933	ENSPTRG00000019727	CNOT4	100	95.933	Pan_troglodytes
ENSCPBG00000004959	CNOT4	100	95.933	ENSPANG00000017724	CNOT4	100	95.933	Papio_anubis
ENSCPBG00000004959	CNOT4	100	69.241	ENSPKIG00000018137	cnot4a	100	69.620	Paramormyrops_kingsleyae
ENSCPBG00000004959	CNOT4	100	97.389	ENSPSIG00000011256	CNOT4	100	97.389	Pelodiscus_sinensis
ENSCPBG00000004959	CNOT4	93	88.519	ENSPMGG00000005671	cnot4a	100	66.899	Periophthalmus_magnuspinnatus
ENSCPBG00000004959	CNOT4	100	94.951	ENSPEMG00000021566	Cnot4	100	94.951	Peromyscus_maniculatus_bairdii
ENSCPBG00000004959	CNOT4	100	96.353	ENSPCIG00000029622	CNOT4	96	96.353	Phascolarctos_cinereus
ENSCPBG00000004959	CNOT4	100	68.659	ENSPFOG00000002228	cnot4a	100	68.780	Poecilia_formosa
ENSCPBG00000004959	CNOT4	100	69.004	ENSPLAG00000001780	cnot4a	100	69.004	Poecilia_latipinna
ENSCPBG00000004959	CNOT4	100	69.144	ENSPMEG00000006852	cnot4a	100	69.285	Poecilia_mexicana
ENSCPBG00000004959	CNOT4	100	71.925	ENSPREG00000008171	cnot4a	100	72.193	Poecilia_reticulata
ENSCPBG00000004959	CNOT4	100	95.372	ENSPPYG00000018026	CNOT4	100	95.372	Pongo_abelii
ENSCPBG00000004959	CNOT4	100	96.073	ENSPCOG00000019907	CNOT4	100	97.418	Propithecus_coquereli
ENSCPBG00000004959	CNOT4	94	94.494	ENSPVAG00000004905	CNOT4	90	94.203	Pteropus_vampyrus
ENSCPBG00000004959	CNOT4	99	89.299	ENSPNYG00000004276	cnot4a	99	83.333	Pundamilia_nyererei
ENSCPBG00000004959	CNOT4	100	72.783	ENSPNAG00000008679	cnot4b	100	73.227	Pygocentrus_nattereri
ENSCPBG00000004959	CNOT4	99	91.882	ENSPNAG00000020433	cnot4a	91	91.882	Pygocentrus_nattereri
ENSCPBG00000004959	CNOT4	100	94.250	ENSRNOG00000010795	Cnot4	100	94.250	Rattus_norvegicus
ENSCPBG00000004959	CNOT4	100	96.073	ENSRBIG00000043977	CNOT4	100	96.073	Rhinopithecus_bieti
ENSCPBG00000004959	CNOT4	100	95.652	ENSSBOG00000020808	CNOT4	100	95.652	Saimiri_boliviensis_boliviensis
ENSCPBG00000004959	CNOT4	100	96.634	ENSSHAG00000013639	CNOT4	100	96.634	Sarcophilus_harrisii
ENSCPBG00000004959	CNOT4	99	90.406	ENSSFOG00015002019	cnot4a	91	90.406	Scleropages_formosus
ENSCPBG00000004959	CNOT4	99	92.251	ENSSFOG00015017285	CNOT4	91	92.251	Scleropages_formosus
ENSCPBG00000004959	CNOT4	100	69.725	ENSSMAG00000008614	cnot4a	100	69.742	Scophthalmus_maximus
ENSCPBG00000004959	CNOT4	100	66.287	ENSSDUG00000018585	cnot4b	100	66.572	Seriola_dumerili
ENSCPBG00000004959	CNOT4	99	89.299	ENSSDUG00000022635	cnot4a	91	89.299	Seriola_dumerili
ENSCPBG00000004959	CNOT4	100	61.765	ENSSLDG00000014347	cnot4b	100	60.497	Seriola_lalandi_dorsalis
ENSCPBG00000004959	CNOT4	99	89.299	ENSSLDG00000015770	cnot4a	91	89.299	Seriola_lalandi_dorsalis
ENSCPBG00000004959	CNOT4	100	89.914	ENSSPUG00000004677	CNOT4	100	89.914	Sphenodon_punctatus
ENSCPBG00000004959	CNOT4	99	89.299	ENSSPAG00000012329	cnot4a	91	89.299	Stegastes_partitus
ENSCPBG00000004959	CNOT4	100	96.073	ENSSSCG00000021354	CNOT4	100	96.073	Sus_scrofa
ENSCPBG00000004959	CNOT4	100	97.647	ENSTGUG00000009161	CNOT4	100	97.647	Taeniopygia_guttata
ENSCPBG00000004959	CNOT4	93	89.259	ENSTRUG00000016861	cnot4a	100	69.667	Takifugu_rubripes
ENSCPBG00000004959	CNOT4	100	71.003	ENSTNIG00000016000	cnot4a	100	71.545	Tetraodon_nigroviridis
ENSCPBG00000004959	CNOT4	94	90.327	ENSTBEG00000002202	CNOT4	88	91.108	Tupaia_belangeri
ENSCPBG00000004959	CNOT4	94	95.691	ENSTTRG00000005122	CNOT4	90	95.369	Tursiops_truncatus
ENSCPBG00000004959	CNOT4	100	89.337	ENSUAMG00000026759	CNOT4	94	97.048	Ursus_americanus
ENSCPBG00000004959	CNOT4	99	96.186	ENSUMAG00000015351	CNOT4	95	96.186	Ursus_maritimus
ENSCPBG00000004959	CNOT4	100	96.073	ENSVVUG00000006200	CNOT4	100	96.073	Vulpes_vulpes
ENSCPBG00000004959	CNOT4	97	97.518	ENSXETG00000010594	cnot4	91	97.518	Xenopus_tropicalis
ENSCPBG00000004959	CNOT4	90	67.293	ENSXCOG00000020824	cnot4a	98	71.537	Xiphophorus_couchianus
ENSCPBG00000004959	CNOT4	100	71.293	ENSXMAG00000016984	cnot4a	100	72.480	Xiphophorus_maculatus