EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000004990 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 20938 bases
Position: chrKK084455.1:10775-31712
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	1	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	2	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	3	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	4	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	5	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	6	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	7	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	8	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	9	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	10	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	11	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	12	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	13	14
ENSCPBP00000006274	zf-C2H2	PF00096.26	4.6e-98	14	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	1	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	2	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	3	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	4	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	5	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	6	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	7	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	8	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	9	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	10	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	11	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	12	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	13	14
ENSCPBP00000006270	zf-C2H2	PF00096.26	7.4e-98	14	14
ENSCPBP00000006259	zf-C2H2	PF00096.26	1.2e-72	1	10
ENSCPBP00000006259	zf-C2H2	PF00096.26	1.2e-72	2	10
ENSCPBP00000006259	zf-C2H2	PF00096.26	1.2e-72	3	10
ENSCPBP00000006259	zf-C2H2	PF00096.26	1.2e-72	4	10
ENSCPBP00000006259	zf-C2H2	PF00096.26	1.2e-72	5	10
ENSCPBP00000006259	zf-C2H2	PF00096.26	1.2e-72	6	10
ENSCPBP00000006259	zf-C2H2	PF00096.26	1.2e-72	7	10
ENSCPBP00000006259	zf-C2H2	PF00096.26	1.2e-72	8	10
ENSCPBP00000006259	zf-C2H2	PF00096.26	1.2e-72	9	10
ENSCPBP00000006259	zf-C2H2	PF00096.26	1.2e-72	10	10
ENSCPBP00000006287	zf-C2H2	PF00096.26	5.4e-65	1	10
ENSCPBP00000006287	zf-C2H2	PF00096.26	5.4e-65	2	10
ENSCPBP00000006287	zf-C2H2	PF00096.26	5.4e-65	3	10
ENSCPBP00000006287	zf-C2H2	PF00096.26	5.4e-65	4	10
ENSCPBP00000006287	zf-C2H2	PF00096.26	5.4e-65	5	10
ENSCPBP00000006287	zf-C2H2	PF00096.26	5.4e-65	6	10
ENSCPBP00000006287	zf-C2H2	PF00096.26	5.4e-65	7	10
ENSCPBP00000006287	zf-C2H2	PF00096.26	5.4e-65	8	10
ENSCPBP00000006287	zf-C2H2	PF00096.26	5.4e-65	9	10
ENSCPBP00000006287	zf-C2H2	PF00096.26	5.4e-65	10	10
ENSCPBP00000006292	zf-C2H2	PF00096.26	1e-63	1	9
ENSCPBP00000006292	zf-C2H2	PF00096.26	1e-63	2	9
ENSCPBP00000006292	zf-C2H2	PF00096.26	1e-63	3	9
ENSCPBP00000006292	zf-C2H2	PF00096.26	1e-63	4	9
ENSCPBP00000006292	zf-C2H2	PF00096.26	1e-63	5	9
ENSCPBP00000006292	zf-C2H2	PF00096.26	1e-63	6	9
ENSCPBP00000006292	zf-C2H2	PF00096.26	1e-63	7	9
ENSCPBP00000006292	zf-C2H2	PF00096.26	1e-63	8	9
ENSCPBP00000006292	zf-C2H2	PF00096.26	1e-63	9	9
ENSCPBP00000006274	zf-met	PF12874.7	5.4e-16	1	1
ENSCPBP00000006270	zf-met	PF12874.7	8.3e-16	1	1
ENSCPBP00000006259	zf-met	PF12874.7	1.6e-11	1	1
ENSCPBP00000006292	zf-met	PF12874.7	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000007573	-	1359	-	ENSCPBP00000006259	452 (aa)	-	-
ENSCPBT00000007584	-	1575	-	ENSCPBP00000006270	524 (aa)	-	-
ENSCPBT00000007608	-	837	-	ENSCPBP00000006292	278 (aa)	-	-
ENSCPBT00000007602	-	1302	-	ENSCPBP00000006287	433 (aa)	-	-
ENSCPBT00000007588	-	1533	-	ENSCPBP00000006274	510 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000004990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000004990's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000004990	-	100	51.770	ENSCPBG00000005586	-	68	53.952
ENSCPBG00000004990	-	100	66.187	ENSCPBG00000003130	-	98	68.224
ENSCPBG00000004990	-	100	66.438	ENSCPBG00000001181	-	99	67.893
ENSCPBG00000004990	-	100	61.511	ENSCPBG00000002430	-	98	63.121
ENSCPBG00000004990	-	100	66.187	ENSCPBG00000001272	-	99	66.146
ENSCPBG00000004990	-	100	44.238	ENSCPBG00000013652	-	73	44.444
ENSCPBG00000004990	-	100	40.288	ENSCPBG00000026947	ZNF319	95	41.425
ENSCPBG00000004990	-	100	69.549	ENSCPBG00000001421	-	93	79.032
ENSCPBG00000004990	-	100	58.108	ENSCPBG00000015987	-	68	58.108
ENSCPBG00000004990	-	100	56.272	ENSCPBG00000009609	-	92	54.571
ENSCPBG00000004990	-	100	41.667	ENSCPBG00000024735	PRDM5	85	39.908
ENSCPBG00000004990	-	100	58.993	ENSCPBG00000026433	-	55	61.006
ENSCPBG00000004990	-	100	50.000	ENSCPBG00000009849	-	83	52.427
ENSCPBG00000004990	-	100	69.725	ENSCPBG00000015500	-	99	70.866
ENSCPBG00000004990	-	100	66.906	ENSCPBG00000017489	-	97	65.436
ENSCPBG00000004990	-	100	52.679	ENSCPBG00000001526	-	83	55.251
ENSCPBG00000004990	-	100	56.281	ENSCPBG00000002063	-	78	58.421
ENSCPBG00000004990	-	99	61.733	ENSCPBG00000021479	-	100	61.733
ENSCPBG00000004990	-	100	63.347	ENSCPBG00000016841	-	99	63.780
ENSCPBG00000004990	-	100	57.754	ENSCPBG00000002014	-	70	60.550
ENSCPBG00000004990	-	100	61.847	ENSCPBG00000021487	-	95	61.654
ENSCPBG00000004990	-	99	84.615	ENSCPBG00000012976	-	91	84.615
ENSCPBG00000004990	-	100	66.192	ENSCPBG00000017494	-	99	65.924
ENSCPBG00000004990	-	100	65.490	ENSCPBG00000005703	-	57	65.462
ENSCPBG00000004990	-	100	38.577	ENSCPBG00000004542	ZNF865	79	41.762
ENSCPBG00000004990	-	100	54.857	ENSCPBG00000001258	-	98	60.000
ENSCPBG00000004990	-	100	45.817	ENSCPBG00000008580	-	100	42.347
ENSCPBG00000004990	-	100	65.766	ENSCPBG00000003774	-	99	68.254
ENSCPBG00000004990	-	100	41.797	ENSCPBG00000023418	-	50	45.000
ENSCPBG00000004990	-	100	50.515	ENSCPBG00000005715	ZBTB49	60	46.552
ENSCPBG00000004990	-	100	62.950	ENSCPBG00000004030	-	99	64.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000004990	-	100	61.074	ENSAMXG00000029161	-	88	61.074	Astyanax_mexicanus
ENSCPBG00000004990	-	100	63.768	ENSGAGG00000009272	-	98	65.763	Gopherus_agassizii
ENSCPBG00000004990	-	100	64.314	ENSGAGG00000011487	-	100	62.295	Gopherus_agassizii
ENSCPBG00000004990	-	99	63.454	ENSGAGG00000001645	-	91	62.598	Gopherus_agassizii
ENSCPBG00000004990	-	99	64.961	ENSGAGG00000010833	-	98	64.336	Gopherus_agassizii
ENSCPBG00000004990	-	100	69.677	ENSGAGG00000002179	-	100	77.023	Gopherus_agassizii
ENSCPBG00000004990	-	99	90.047	ENSGAGG00000002214	-	99	90.047	Gopherus_agassizii
ENSCPBG00000004990	-	100	59.722	ENSGAGG00000018445	-	78	62.338	Gopherus_agassizii
ENSCPBG00000004990	-	100	63.669	ENSGAGG00000020134	-	97	60.645	Gopherus_agassizii
ENSCPBG00000004990	-	100	61.803	ENSGAGG00000012452	-	93	65.238	Gopherus_agassizii
ENSCPBG00000004990	-	100	58.791	ENSGAGG00000016529	-	93	61.140	Gopherus_agassizii
ENSCPBG00000004990	-	96	64.463	ENSGAGG00000014356	-	98	64.463	Gopherus_agassizii
ENSCPBG00000004990	-	100	65.455	ENSGAGG00000010324	-	97	65.018	Gopherus_agassizii
ENSCPBG00000004990	-	100	60.241	ENSPSIG00000000522	-	89	58.173	Pelodiscus_sinensis
ENSCPBG00000004990	-	100	60.759	ENSPSIG00000015216	-	81	61.674	Pelodiscus_sinensis
ENSCPBG00000004990	-	100	63.077	ENSPSIG00000002569	-	90	66.792	Pelodiscus_sinensis
ENSCPBG00000004990	-	100	57.143	ENSPSIG00000001026	-	94	60.191	Pelodiscus_sinensis
ENSCPBG00000004990	-	100	61.932	ENSPSIG00000015465	-	99	60.268	Pelodiscus_sinensis
ENSCPBG00000004990	-	100	76.868	ENSPSIG00000012865	-	97	75.714	Pelodiscus_sinensis
ENSCPBG00000004990	-	97	67.200	ENSPSIG00000009893	-	99	67.200	Pelodiscus_sinensis
ENSCPBG00000004990	-	100	57.592	ENSTGUG00000014614	-	99	58.685	Taeniopygia_guttata
ENSCPBG00000004990	-	100	57.490	ENSTGUG00000016850	-	100	60.156	Taeniopygia_guttata
ENSCPBG00000004990	-	100	60.667	ENSTGUG00000018327	-	100	65.333	Taeniopygia_guttata
ENSCPBG00000004990	-	100	63.889	ENSTGUG00000018349	-	100	66.667	Taeniopygia_guttata
ENSCPBG00000004990	-	100	60.448	ENSTGUG00000013736	-	100	62.500	Taeniopygia_guttata
ENSCPBG00000004990	-	100	55.978	ENSTGUG00000015260	-	100	59.218	Taeniopygia_guttata
ENSCPBG00000004990	-	100	58.300	ENSTGUG00000016781	-	100	60.967	Taeniopygia_guttata
ENSCPBG00000004990	-	100	56.338	ENSTGUG00000018374	-	100	59.091	Taeniopygia_guttata
ENSCPBG00000004990	-	100	60.000	ENSTGUG00000018445	-	100	60.914	Taeniopygia_guttata
ENSCPBG00000004990	-	100	58.333	ENSTGUG00000016516	-	99	60.581	Taeniopygia_guttata
ENSCPBG00000004990	-	100	65.385	ENSTGUG00000018542	-	100	66.667	Taeniopygia_guttata
ENSCPBG00000004990	-	100	60.150	ENSTGUG00000018518	-	100	65.000	Taeniopygia_guttata
ENSCPBG00000004990	-	100	58.115	ENSTGUG00000014888	-	98	61.972	Taeniopygia_guttata