EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000005134 (Gene tree)
Gene ID: 101950012
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 33370 bases
Position: chrKK084034.1:27582-60951
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000006456	zf-U11-48K	PF05253.12	6.6e-18	1	2
ENSCPBP00000006456	zf-U11-48K	PF05253.12	6.6e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000007800	-	690	-	ENSCPBP00000006456	230 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000005134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000005134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000005134	-	69	72.785	ENSCPBG00000024905	-	85	72.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000005134	-	72	69.277	ENSG00000170627	GTSF1	99	68.675	Homo_sapiens
ENSCPBG00000005134	-	64	47.973	ENSAPOG00000022724	-	95	47.973	Acanthochromis_polyacanthus
ENSCPBG00000005134	-	70	70.807	ENSAMEG00000000939	GTSF1	95	70.807	Ailuropoda_melanoleuca
ENSCPBG00000005134	-	64	46.980	ENSAOCG00000022214	-	69	46.980	Amphiprion_ocellaris
ENSCPBG00000005134	-	60	64.493	ENSAPLG00000004814	GTSF1	100	64.493	Anas_platyrhynchos
ENSCPBG00000005134	-	50	48.276	ENSACAG00000029590	-	94	48.276	Anolis_carolinensis
ENSCPBG00000005134	-	71	60.123	ENSACAG00000014260	-	95	60.123	Anolis_carolinensis
ENSCPBG00000005134	-	72	66.867	ENSANAG00000024529	GTSF1	99	66.867	Aotus_nancymaae
ENSCPBG00000005134	-	72	69.880	ENSBTAG00000018085	GTSF1	99	69.880	Bos_taurus
ENSCPBG00000005134	-	72	68.072	ENSCJAG00000018968	-	99	68.072	Callithrix_jacchus
ENSCPBG00000005134	-	75	63.584	ENSCJAG00000039915	-	91	63.584	Callithrix_jacchus
ENSCPBG00000005134	-	72	71.084	ENSCAFG00000006465	-	99	71.084	Canis_familiaris
ENSCPBG00000005134	-	77	68.362	ENSCAFG00020020373	-	94	71.515	Canis_lupus_dingo
ENSCPBG00000005134	-	70	69.136	ENSCHIG00000012215	-	94	69.136	Capra_hircus
ENSCPBG00000005134	-	72	53.012	ENSTSYG00000035266	-	99	53.012	Carlito_syrichta
ENSCPBG00000005134	-	72	68.072	ENSTSYG00000004679	-	99	68.072	Carlito_syrichta
ENSCPBG00000005134	-	72	70.482	ENSCPOG00000008743	GTSF1	99	70.482	Cavia_porcellus
ENSCPBG00000005134	-	70	57.407	ENSCCAG00000032808	GTSF1	99	56.522	Cebus_capucinus
ENSCPBG00000005134	-	72	68.675	ENSCATG00000036328	GTSF1	99	68.675	Cercocebus_atys
ENSCPBG00000005134	-	81	64.706	ENSCLAG00000012811	GTSF1	99	69.880	Chinchilla_lanigera
ENSCPBG00000005134	-	69	69.811	ENSCSAG00000005394	GTSF1	100	69.811	Chlorocebus_sabaeus
ENSCPBG00000005134	-	70	72.050	ENSCHOG00000001659	GTSF1	96	72.050	Choloepus_hoffmanni
ENSCPBG00000005134	-	72	67.470	ENSCANG00000033118	GTSF1	99	67.470	Colobus_angolensis_palliatus
ENSCPBG00000005134	-	72	63.253	ENSCANG00000031776	-	99	63.253	Colobus_angolensis_palliatus
ENSCPBG00000005134	-	72	70.482	ENSCGRG00001013814	Gtsf1	99	70.482	Cricetulus_griseus_chok1gshd
ENSCPBG00000005134	-	72	70.482	ENSCGRG00000007733	Gtsf1	99	70.482	Cricetulus_griseus_crigri
ENSCPBG00000005134	-	69	72.500	ENSDNOG00000001438	-	80	72.500	Dasypus_novemcinctus
ENSCPBG00000005134	-	72	71.084	ENSDORG00000003228	Gtsf1	99	71.084	Dipodomys_ordii
ENSCPBG00000005134	-	72	68.675	ENSETEG00000009310	GTSF1	99	68.675	Echinops_telfairi
ENSCPBG00000005134	-	77	66.854	ENSEASG00005010260	GTSF1	95	66.854	Equus_asinus_asinus
ENSCPBG00000005134	-	71	70.909	ENSECAG00000013618	GTSF1	99	69.880	Equus_caballus
ENSCPBG00000005134	-	72	71.084	ENSEEUG00000005185	GTSF1	99	71.084	Erinaceus_europaeus
ENSCPBG00000005134	-	74	68.605	ENSFCAG00000010156	-	99	70.482	Felis_catus
ENSCPBG00000005134	-	75	50.575	ENSFCAG00000023672	-	93	50.575	Felis_catus
ENSCPBG00000005134	-	52	56.667	ENSFALG00000007613	-	95	56.667	Ficedula_albicollis
ENSCPBG00000005134	-	80	63.441	ENSFDAG00000009383	GTSF1	99	68.675	Fukomys_damarensis
ENSCPBG00000005134	-	67	64.516	ENSGALG00000001109	GTSF1	96	64.516	Gallus_gallus
ENSCPBG00000005134	-	64	48.344	ENSGACG00000010783	-	80	48.344	Gasterosteus_aculeatus
ENSCPBG00000005134	-	77	72.881	ENSGAGG00000011062	GTSF1	92	72.881	Gopherus_agassizii
ENSCPBG00000005134	-	72	68.675	ENSGGOG00000016063	GTSF1	99	68.675	Gorilla_gorilla
ENSCPBG00000005134	-	80	63.978	ENSHGLG00000002436	GTSF1	99	69.277	Heterocephalus_glaber_female
ENSCPBG00000005134	-	80	63.978	ENSHGLG00100017301	GTSF1	99	69.277	Heterocephalus_glaber_male
ENSCPBG00000005134	-	70	42.331	ENSIPUG00000002483	-	86	42.331	Ictalurus_punctatus
ENSCPBG00000005134	-	77	68.539	ENSSTOG00000025170	GTSF1	99	71.084	Ictidomys_tridecemlineatus
ENSCPBG00000005134	-	72	62.651	ENSJJAG00000017442	-	99	62.651	Jaculus_jaculus
ENSCPBG00000005134	-	72	68.072	ENSJJAG00000003323	-	99	68.072	Jaculus_jaculus
ENSCPBG00000005134	-	64	48.344	ENSKMAG00000006038	-	80	48.344	Kryptolebias_marmoratus
ENSCPBG00000005134	-	66	60.784	ENSLACG00000008870	GTSF1	79	60.784	Latimeria_chalumnae
ENSCPBG00000005134	-	70	72.050	ENSLAFG00000016318	GTSF1	96	72.050	Loxodonta_africana
ENSCPBG00000005134	-	72	68.675	ENSMFAG00000041178	GTSF1	99	68.675	Macaca_fascicularis
ENSCPBG00000005134	-	75	67.052	ENSMMUG00000003758	GTSF1	99	68.675	Macaca_mulatta
ENSCPBG00000005134	-	72	68.675	ENSMNEG00000036779	GTSF1	99	68.675	Macaca_nemestrina
ENSCPBG00000005134	-	72	68.675	ENSMLEG00000028375	GTSF1	99	68.675	Mandrillus_leucophaeus
ENSCPBG00000005134	-	60	64.493	ENSMGAG00000000685	GTSF1	96	64.493	Meleagris_gallopavo
ENSCPBG00000005134	-	72	48.824	ENSMAUG00000018746	Gtsf1	97	48.824	Mesocricetus_auratus
ENSCPBG00000005134	-	72	71.084	ENSMICG00000008444	-	99	71.084	Microcebus_murinus
ENSCPBG00000005134	-	72	69.880	ENSMOCG00000018889	Gtsf1	99	69.880	Microtus_ochrogaster
ENSCPBG00000005134	-	72	76.506	ENSMODG00000019422	GTSF1	99	76.506	Monodelphis_domestica
ENSCPBG00000005134	-	79	66.129	MGP_CAROLIEiJ_G0020379	Gtsf1	97	75.806	Mus_caroli
ENSCPBG00000005134	-	79	66.129	ENSMUSG00000022487	Gtsf1	97	75.806	Mus_musculus
ENSCPBG00000005134	-	79	67.033	MGP_PahariEiJ_G0020378	Gtsf1	97	76.613	Mus_pahari
ENSCPBG00000005134	-	79	66.129	MGP_SPRETEiJ_G0021272	Gtsf1	97	75.806	Mus_spretus
ENSCPBG00000005134	-	72	68.675	ENSMPUG00000019323	-	99	68.675	Mustela_putorius_furo
ENSCPBG00000005134	-	72	64.848	ENSMPUG00000019140	-	99	64.848	Mustela_putorius_furo
ENSCPBG00000005134	-	70	70.988	ENSMPUG00000005669	-	96	70.988	Mustela_putorius_furo
ENSCPBG00000005134	-	72	68.072	ENSMLUG00000026557	-	99	68.072	Myotis_lucifugus
ENSCPBG00000005134	-	72	70.482	ENSMLUG00000012961	-	99	70.482	Myotis_lucifugus
ENSCPBG00000005134	-	78	67.778	ENSNGAG00000014213	Gtsf1	99	70.482	Nannospalax_galili
ENSCPBG00000005134	-	72	69.277	ENSNLEG00000017635	GTSF1	99	69.277	Nomascus_leucogenys
ENSCPBG00000005134	-	72	66.265	ENSMEUG00000016206	GTSF1	99	66.265	Notamacropus_eugenii
ENSCPBG00000005134	-	72	53.333	ENSOPRG00000017277	GTSF1	99	53.333	Ochotona_princeps
ENSCPBG00000005134	-	72	71.084	ENSODEG00000014220	GTSF1	99	71.084	Octodon_degus
ENSCPBG00000005134	-	68	66.456	ENSOANG00000011386	GTSF1	96	63.975	Ornithorhynchus_anatinus
ENSCPBG00000005134	-	72	68.675	ENSOCUG00000024495	GTSF1	99	68.675	Oryctolagus_cuniculus
ENSCPBG00000005134	-	50	46.491	ENSORLG00015005017	-	70	46.491	Oryzias_latipes_hsok
ENSCPBG00000005134	-	73	68.421	ENSOGAG00000017227	GTSF1	100	68.421	Otolemur_garnettii
ENSCPBG00000005134	-	72	69.277	ENSOARG00000016162	GTSF1	99	69.277	Ovis_aries
ENSCPBG00000005134	-	72	68.675	ENSPPAG00000028506	GTSF1	99	68.675	Pan_paniscus
ENSCPBG00000005134	-	72	70.482	ENSPPRG00000004344	-	99	70.482	Panthera_pardus
ENSCPBG00000005134	-	75	60.920	ENSPPRG00000017612	-	94	60.920	Panthera_pardus
ENSCPBG00000005134	-	72	70.482	ENSPTIG00000020415	-	99	70.482	Panthera_tigris_altaica
ENSCPBG00000005134	-	75	61.494	ENSPTIG00000010868	-	94	61.494	Panthera_tigris_altaica
ENSCPBG00000005134	-	72	69.277	ENSPTRG00000005041	GTSF1	99	68.675	Pan_troglodytes
ENSCPBG00000005134	-	72	68.675	ENSPANG00000020579	GTSF1	99	68.675	Papio_anubis
ENSCPBG00000005134	-	86	80.303	ENSPSIG00000009968	GTSF1	98	80.303	Pelodiscus_sinensis
ENSCPBG00000005134	-	56	48.062	ENSPSIG00000009839	-	80	48.062	Pelodiscus_sinensis
ENSCPBG00000005134	-	72	70.482	ENSPEMG00000009595	Gtsf1	99	70.482	Peromyscus_maniculatus_bairdii
ENSCPBG00000005134	-	72	72.892	ENSPCIG00000006731	GTSF1	99	72.892	Phascolarctos_cinereus
ENSCPBG00000005134	-	72	68.675	ENSPPYG00000004605	GTSF1	99	68.675	Pongo_abelii
ENSCPBG00000005134	-	69	62.893	ENSPCOG00000015201	-	98	61.006	Propithecus_coquereli
ENSCPBG00000005134	-	72	71.084	ENSPCOG00000016907	-	99	71.084	Propithecus_coquereli
ENSCPBG00000005134	-	72	70.482	ENSPVAG00000000333	GTSF1	99	70.482	Pteropus_vampyrus
ENSCPBG00000005134	-	66	46.104	ENSPNAG00000005737	-	83	46.104	Pygocentrus_nattereri
ENSCPBG00000005134	-	81	64.362	ENSRNOG00000036831	Gtsf1	97	64.362	Rattus_norvegicus
ENSCPBG00000005134	-	75	59.538	ENSRBIG00000039916	-	91	59.538	Rhinopithecus_bieti
ENSCPBG00000005134	-	72	68.675	ENSRBIG00000043438	-	99	68.675	Rhinopithecus_bieti
ENSCPBG00000005134	-	72	68.675	ENSRROG00000008137	GTSF1	99	68.675	Rhinopithecus_roxellana
ENSCPBG00000005134	-	72	68.072	ENSSBOG00000029460	GTSF1	99	68.072	Saimiri_boliviensis_boliviensis
ENSCPBG00000005134	-	72	76.506	ENSSHAG00000011633	GTSF1	99	76.506	Sarcophilus_harrisii
ENSCPBG00000005134	-	55	74.603	ENSSARG00000004928	GTSF1	75	74.603	Sorex_araneus
ENSCPBG00000005134	-	71	50.307	ENSSPUG00000010064	GTSF1	93	72.727	Sphenodon_punctatus
ENSCPBG00000005134	-	72	71.687	ENSSSCG00000026333	GTSF1	99	71.687	Sus_scrofa
ENSCPBG00000005134	-	55	58.594	ENSTGUG00000002008	-	100	58.594	Taeniopygia_guttata
ENSCPBG00000005134	-	69	71.698	ENSTBEG00000006154	GTSF1	99	71.698	Tupaia_belangeri
ENSCPBG00000005134	-	72	69.277	ENSTTRG00000004470	GTSF1	99	69.277	Tursiops_truncatus
ENSCPBG00000005134	-	77	67.797	ENSUAMG00000021669	GTSF1	95	70.659	Ursus_americanus
ENSCPBG00000005134	-	72	70.482	ENSUMAG00000011279	GTSF1	99	70.482	Ursus_maritimus
ENSCPBG00000005134	-	70	70.186	ENSVPAG00000007016	GTSF1	96	70.186	Vicugna_pacos
ENSCPBG00000005134	-	78	67.222	ENSVVUG00000023687	-	90	67.222	Vulpes_vulpes
ENSCPBG00000005134	-	70	62.963	ENSXETG00000033546	gtsf1	72	62.963	Xenopus_tropicalis