EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000005349 (Gene tree)
Gene ID: 101953064
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 19886 bases
Position: chrKK083280.1:193524-213409
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000006755	RRM_1	PF00076.22	3.6e-33	1	3
ENSCPBP00000006755	RRM_1	PF00076.22	3.6e-33	2	3
ENSCPBP00000006755	RRM_1	PF00076.22	3.6e-33	3	3
ENSCPBP00000006765	RRM_1	PF00076.22	3.8e-33	1	3
ENSCPBP00000006765	RRM_1	PF00076.22	3.8e-33	2	3
ENSCPBP00000006765	RRM_1	PF00076.22	3.8e-33	3	3
ENSCPBP00000006760	RRM_1	PF00076.22	4.3e-33	1	3
ENSCPBP00000006760	RRM_1	PF00076.22	4.3e-33	2	3
ENSCPBP00000006760	RRM_1	PF00076.22	4.3e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000008143	-	3498	-	ENSCPBP00000006760	795 (aa)	-	-
ENSCPBT00000008148	-	3414	-	ENSCPBP00000006765	767 (aa)	-	-
ENSCPBT00000008138	-	3402	-	ENSCPBP00000006755	763 (aa)	XP_008174236	UPI00046C3684

Gene Model

Click here to download ENSCPBG00000005349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000005349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000005349	-	95	42.228	ENSCPBG00000001015	RAVER2	95	42.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000005349	-	96	62.065	ENSG00000161847	RAVER1	95	68.607	Homo_sapiens
ENSCPBG00000005349	-	96	51.897	ENSAPOG00000017267	raver1	84	52.022	Acanthochromis_polyacanthus
ENSCPBG00000005349	-	96	60.875	ENSAMEG00000011738	RAVER1	94	61.905	Ailuropoda_melanoleuca
ENSCPBG00000005349	-	96	51.696	ENSAOCG00000005128	raver1	88	51.757	Amphiprion_ocellaris
ENSCPBG00000005349	-	96	52.022	ENSAPEG00000010854	raver1	91	52.081	Amphiprion_percula
ENSCPBG00000005349	-	96	51.609	ENSATEG00000021004	raver1	91	51.609	Anabas_testudineus
ENSCPBG00000005349	-	84	77.077	ENSACAG00000008386	-	94	78.163	Anolis_carolinensis
ENSCPBG00000005349	-	96	61.469	ENSANAG00000028226	RAVER1	94	62.629	Aotus_nancymaae
ENSCPBG00000005349	-	96	51.743	ENSACLG00000018492	raver1	91	50.676	Astatotilapia_calliptera
ENSCPBG00000005349	-	96	52.603	ENSAMXG00000005132	raver1	99	52.196	Astyanax_mexicanus
ENSCPBG00000005349	-	82	79.891	ENSBTAG00000015721	RAVER1	93	79.891	Bos_taurus
ENSCPBG00000005349	-	96	61.598	ENSCJAG00000005671	RAVER1	94	62.758	Callithrix_jacchus
ENSCPBG00000005349	-	96	63.697	ENSCAFG00000017861	RAVER1	94	65.027	Canis_familiaris
ENSCPBG00000005349	-	96	63.697	ENSCAFG00020024449	RAVER1	96	65.027	Canis_lupus_dingo
ENSCPBG00000005349	-	96	59.974	ENSCHIG00000006718	RAVER1	95	73.510	Capra_hircus
ENSCPBG00000005349	-	63	90.625	ENSTSYG00000027107	RAVER1	100	73.445	Carlito_syrichta
ENSCPBG00000005349	-	63	89.655	ENSCAPG00000002269	RAVER1	93	69.789	Cavia_aperea
ENSCPBG00000005349	-	96	61.269	ENSCPOG00000001008	RAVER1	96	62.113	Cavia_porcellus
ENSCPBG00000005349	-	96	61.032	ENSCCAG00000031723	RAVER1	94	62.452	Cebus_capucinus
ENSCPBG00000005349	-	96	62.065	ENSCATG00000043863	RAVER1	94	63.226	Cercocebus_atys
ENSCPBG00000005349	-	96	61.954	ENSCLAG00000009336	RAVER1	96	61.954	Chinchilla_lanigera
ENSCPBG00000005349	-	96	62.323	ENSCSAG00000007317	RAVER1	80	63.226	Chlorocebus_sabaeus
ENSCPBG00000005349	-	96	62.323	ENSCANG00000008337	RAVER1	94	63.226	Colobus_angolensis_palliatus
ENSCPBG00000005349	-	96	61.183	ENSCGRG00001013260	-	96	62.003	Cricetulus_griseus_chok1gshd
ENSCPBG00000005349	-	96	61.183	ENSCGRG00000015138	-	96	62.003	Cricetulus_griseus_crigri
ENSCPBG00000005349	-	99	48.438	ENSCSEG00000021092	raver1	94	49.482	Cynoglossus_semilaevis
ENSCPBG00000005349	-	97	51.319	ENSCVAG00000013971	raver1	92	52.174	Cyprinodon_variegatus
ENSCPBG00000005349	-	96	50.336	ENSDARG00000052617	raver1	78	63.889	Danio_rerio
ENSCPBG00000005349	-	60	71.565	ENSDNOG00000035742	-	67	68.524	Dasypus_novemcinctus
ENSCPBG00000005349	-	96	55.102	ENSDORG00000010106	-	93	67.181	Dipodomys_ordii
ENSCPBG00000005349	-	68	65.625	ENSETEG00000008201	-	86	71.859	Echinops_telfairi
ENSCPBG00000005349	-	52	36.613	ENSEBUG00000003030	RAVER1	54	36.131	Eptatretus_burgeri
ENSCPBG00000005349	-	67	79.255	ENSEASG00005010544	-	90	79.255	Equus_asinus_asinus
ENSCPBG00000005349	-	96	61.628	ENSECAG00000024966	RAVER1	94	63.063	Equus_caballus
ENSCPBG00000005349	-	97	52.701	ENSELUG00000023287	raver1	92	53.026	Esox_lucius
ENSCPBG00000005349	-	67	93.750	ENSFCAG00000009435	RAVER1	92	73.289	Felis_catus
ENSCPBG00000005349	-	96	61.578	ENSFDAG00000015113	RAVER1	96	62.082	Fukomys_damarensis
ENSCPBG00000005349	-	97	51.126	ENSGMOG00000003649	raver1	97	51.126	Gadus_morhua
ENSCPBG00000005349	-	76	43.003	ENSGALG00000050608	-	57	45.161	Gallus_gallus
ENSCPBG00000005349	-	96	50.667	ENSGAFG00000015944	raver1	91	50.667	Gambusia_affinis
ENSCPBG00000005349	-	77	68.696	ENSGACG00000013818	raver1	97	48.977	Gasterosteus_aculeatus
ENSCPBG00000005349	-	100	95.282	ENSGAGG00000011748	-	100	95.806	Gopherus_agassizii
ENSCPBG00000005349	-	96	62.420	ENSGGOG00000006015	RAVER1	94	63.320	Gorilla_gorilla
ENSCPBG00000005349	-	96	51.286	ENSHBUG00000021210	raver1	91	50.539	Haplochromis_burtoni
ENSCPBG00000005349	-	96	62.047	ENSHGLG00000015460	RAVER1	96	61.905	Heterocephalus_glaber_female
ENSCPBG00000005349	-	96	62.047	ENSHGLG00100000812	RAVER1	96	61.905	Heterocephalus_glaber_male
ENSCPBG00000005349	-	96	50.604	ENSHCOG00000000449	raver1	89	51.272	Hippocampus_comes
ENSCPBG00000005349	-	98	52.300	ENSIPUG00000013153	raver1	93	52.562	Ictalurus_punctatus
ENSCPBG00000005349	-	96	62.016	ENSSTOG00000003241	RAVER1	96	63.049	Ictidomys_tridecemlineatus
ENSCPBG00000005349	-	96	62.211	ENSJJAG00000018219	-	93	73.348	Jaculus_jaculus
ENSCPBG00000005349	-	96	51.072	ENSKMAG00000017355	raver1	91	51.340	Kryptolebias_marmoratus
ENSCPBG00000005349	-	88	50.514	ENSLBEG00000008268	raver1	87	52.680	Labrus_bergylta
ENSCPBG00000005349	-	91	60.465	ENSLACG00000005809	-	99	60.858	Latimeria_chalumnae
ENSCPBG00000005349	-	96	58.191	ENSLOCG00000007500	raver1	94	59.021	Lepisosteus_oculatus
ENSCPBG00000005349	-	96	61.806	ENSLAFG00000003664	-	98	71.250	Loxodonta_africana
ENSCPBG00000005349	-	96	62.065	ENSMFAG00000037977	RAVER1	94	63.226	Macaca_fascicularis
ENSCPBG00000005349	-	96	62.065	ENSMMUG00000014897	RAVER1	95	67.227	Macaca_mulatta
ENSCPBG00000005349	-	96	62.065	ENSMNEG00000028390	RAVER1	94	63.226	Macaca_nemestrina
ENSCPBG00000005349	-	96	62.194	ENSMLEG00000041959	RAVER1	94	63.097	Mandrillus_leucophaeus
ENSCPBG00000005349	-	96	50.794	ENSMAMG00000012059	raver1	91	52.139	Mastacembelus_armatus
ENSCPBG00000005349	-	96	51.812	ENSMZEG00005019002	raver1	91	52.203	Maylandia_zebra
ENSCPBG00000005349	-	96	61.183	ENSMAUG00000017948	-	96	62.003	Mesocricetus_auratus
ENSCPBG00000005349	-	96	63.930	ENSMICG00000010326	RAVER1	96	64.872	Microcebus_murinus
ENSCPBG00000005349	-	96	60.997	ENSMOCG00000015553	-	96	61.814	Microtus_ochrogaster
ENSCPBG00000005349	-	96	51.822	ENSMMOG00000012093	raver1	91	51.822	Mola_mola
ENSCPBG00000005349	-	96	66.214	ENSMODG00000005584	-	87	66.486	Monodelphis_domestica
ENSCPBG00000005349	-	98	50.991	ENSMALG00000016569	raver1	93	50.991	Monopterus_albus
ENSCPBG00000005349	-	96	60.797	MGP_CAROLIEiJ_G0031860	-	96	62.131	Mus_caroli
ENSCPBG00000005349	-	96	60.540	ENSMUSG00000010205	Raver1	96	61.874	Mus_musculus
ENSCPBG00000005349	-	96	61.054	MGP_PahariEiJ_G0014726	-	96	62.516	Mus_pahari
ENSCPBG00000005349	-	96	60.411	MGP_SPRETEiJ_G0032984	-	96	61.746	Mus_spretus
ENSCPBG00000005349	-	96	61.290	ENSMPUG00000006712	RAVER1	94	62.420	Mustela_putorius_furo
ENSCPBG00000005349	-	96	63.151	ENSMLUG00000012328	RAVER1	96	64.894	Myotis_lucifugus
ENSCPBG00000005349	-	96	61.032	ENSNGAG00000001260	-	96	61.985	Nannospalax_galili
ENSCPBG00000005349	-	96	45.906	ENSNBRG00000010139	raver1	91	46.400	Neolamprologus_brichardi
ENSCPBG00000005349	-	96	61.419	ENSNLEG00000012181	RAVER1	94	62.581	Nomascus_leucogenys
ENSCPBG00000005349	-	91	62.534	ENSMEUG00000003281	-	100	62.534	Notamacropus_eugenii
ENSCPBG00000005349	-	67	90.625	ENSODEG00000016260	RAVER1	93	71.082	Octodon_degus
ENSCPBG00000005349	-	96	50.670	ENSONIG00000001559	raver1	99	51.135	Oreochromis_niloticus
ENSCPBG00000005349	-	96	59.487	ENSOCUG00000020918	RAVER1	96	58.259	Oryctolagus_cuniculus
ENSCPBG00000005349	-	98	50.852	ENSORLG00000005458	raver1	93	50.852	Oryzias_latipes
ENSCPBG00000005349	-	98	50.983	ENSORLG00020004392	raver1	93	50.983	Oryzias_latipes_hni
ENSCPBG00000005349	-	98	50.983	ENSORLG00015017222	raver1	93	50.983	Oryzias_latipes_hsok
ENSCPBG00000005349	-	89	83.019	ENSOMEG00000023956	raver1	93	83.019	Oryzias_melastigma
ENSCPBG00000005349	-	96	61.578	ENSOGAG00000011071	RAVER1	94	62.484	Otolemur_garnettii
ENSCPBG00000005349	-	96	57.956	ENSOARG00000015886	RAVER1	94	58.473	Ovis_aries
ENSCPBG00000005349	-	96	62.065	ENSPPAG00000002611	RAVER1	94	62.968	Pan_paniscus
ENSCPBG00000005349	-	67	93.750	ENSPPRG00000009912	RAVER1	92	73.289	Panthera_pardus
ENSCPBG00000005349	-	96	62.065	ENSPTRG00000010466	RAVER1	94	62.968	Pan_troglodytes
ENSCPBG00000005349	-	96	62.065	ENSPANG00000004122	RAVER1	94	63.226	Papio_anubis
ENSCPBG00000005349	-	96	61.232	ENSPEMG00000016411	-	96	62.051	Peromyscus_maniculatus_bairdii
ENSCPBG00000005349	-	98	66.102	ENSPCIG00000018695	-	98	66.362	Phascolarctos_cinereus
ENSCPBG00000005349	-	97	50.728	ENSPFOG00000007016	raver1	92	52.185	Poecilia_formosa
ENSCPBG00000005349	-	97	49.597	ENSPLAG00000020793	raver1	92	49.933	Poecilia_latipinna
ENSCPBG00000005349	-	98	51.383	ENSPMEG00000011220	raver1	92	51.178	Poecilia_mexicana
ENSCPBG00000005349	-	97	49.134	ENSPREG00000006864	raver1	91	49.001	Poecilia_reticulata
ENSCPBG00000005349	-	96	61.240	ENSPPYG00000010514	RAVER1	80	62.225	Pongo_abelii
ENSCPBG00000005349	-	96	60.976	ENSPCOG00000026605	RAVER1	94	61.874	Propithecus_coquereli
ENSCPBG00000005349	-	96	62.321	ENSPVAG00000003689	RAVER1	96	63.342	Pteropus_vampyrus
ENSCPBG00000005349	-	72	91.667	ENSPNYG00000013284	raver1	91	49.260	Pundamilia_nyererei
ENSCPBG00000005349	-	97	51.910	ENSPNAG00000015476	raver1	92	51.910	Pygocentrus_nattereri
ENSCPBG00000005349	-	96	61.568	ENSRNOG00000020710	Raver1	96	63.117	Rattus_norvegicus
ENSCPBG00000005349	-	96	63.867	ENSRBIG00000034702	RAVER1	94	65.200	Rhinopithecus_bieti
ENSCPBG00000005349	-	96	64.267	ENSRROG00000031186	RAVER1	94	65.200	Rhinopithecus_roxellana
ENSCPBG00000005349	-	96	63.770	ENSSBOG00000023423	RAVER1	94	64.973	Saimiri_boliviensis_boliviensis
ENSCPBG00000005349	-	91	67.236	ENSSHAG00000008181	-	90	67.521	Sarcophilus_harrisii
ENSCPBG00000005349	-	96	50.941	ENSSMAG00000004546	raver1	91	52.209	Scophthalmus_maximus
ENSCPBG00000005349	-	99	52.021	ENSSDUG00000021063	raver1	95	53.826	Seriola_dumerili
ENSCPBG00000005349	-	99	51.895	ENSSLDG00000014505	raver1	95	52.406	Seriola_lalandi_dorsalis
ENSCPBG00000005349	-	96	51.348	ENSSPAG00000000688	raver1	91	52.617	Stegastes_partitus
ENSCPBG00000005349	-	96	63.867	ENSSSCG00000013650	-	96	64.933	Sus_scrofa
ENSCPBG00000005349	-	98	50.000	ENSTRUG00000025641	raver1	93	50.000	Takifugu_rubripes
ENSCPBG00000005349	-	96	61.449	ENSTTRG00000009552	RAVER1	96	63.001	Tursiops_truncatus
ENSCPBG00000005349	-	96	62.162	ENSUAMG00000020385	RAVER1	94	63.192	Ursus_americanus
ENSCPBG00000005349	-	96	63.564	ENSVVUG00000028976	RAVER1	94	64.894	Vulpes_vulpes
ENSCPBG00000005349	-	96	57.995	ENSXETG00000011622	raver1	95	57.995	Xenopus_tropicalis
ENSCPBG00000005349	-	97	50.730	ENSXCOG00000016368	raver1	92	50.870	Xiphophorus_couchianus
ENSCPBG00000005349	-	97	50.665	ENSXMAG00000000217	raver1	92	50.665	Xiphophorus_maculatus