EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000005548 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 1717 bases
Position: chrKK083281.1:158369-160085
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000007046	MMR_HSR1	PF01926.23	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000008490	-	876	-	ENSCPBP00000007046	291 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000005548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000005548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000005548	-	71	48.058	ENSCPBG00000005558	-	74	48.058
ENSCPBG00000005548	-	80	44.635	ENSCPBG00000005566	GIMAP7	65	44.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000005548	-	85	53.226	ENSG00000281887	GIMAP1-GIMAP5	72	54.701	Homo_sapiens
ENSCPBG00000005548	-	81	41.036	ENSG00000196329	GIMAP5	81	41.036	Homo_sapiens
ENSCPBG00000005548	-	68	52.525	ENSAPLG00000001066	-	80	52.525	Anas_platyrhynchos
ENSCPBG00000005548	-	80	49.367	ENSACAG00000016727	-	83	49.367	Anolis_carolinensis
ENSCPBG00000005548	-	63	53.005	ENSACAG00000016862	-	89	53.005	Anolis_carolinensis
ENSCPBG00000005548	-	83	47.177	ENSACAG00000028535	-	90	47.177	Anolis_carolinensis
ENSCPBG00000005548	-	66	46.632	ENSACAG00000017193	-	86	46.632	Anolis_carolinensis
ENSCPBG00000005548	-	66	50.262	ENSBTAG00000004894	-	75	52.174	Bos_taurus
ENSCPBG00000005548	-	65	49.474	ENSBTAG00000039588	-	64	49.474	Bos_taurus
ENSCPBG00000005548	-	76	45.333	ENSBTAG00000000715	-	70	45.333	Bos_taurus
ENSCPBG00000005548	-	67	48.205	ENSCJAG00000020126	-	62	49.206	Callithrix_jacchus
ENSCPBG00000005548	-	68	47.716	ENSCAFG00000024817	-	57	47.716	Canis_familiaris
ENSCPBG00000005548	-	78	41.702	ENSCAFG00020006487	-	92	42.437	Canis_lupus_dingo
ENSCPBG00000005548	-	65	50.000	ENSCHIG00000000607	-	64	50.000	Capra_hircus
ENSCPBG00000005548	-	65	49.474	ENSCHIG00000000431	-	61	49.474	Capra_hircus
ENSCPBG00000005548	-	65	48.947	ENSCHIG00000020434	-	78	50.311	Capra_hircus
ENSCPBG00000005548	-	65	50.000	ENSCHIG00000013093	-	64	50.000	Capra_hircus
ENSCPBG00000005548	-	74	47.196	ENSTSYG00000010016	-	66	49.746	Carlito_syrichta
ENSCPBG00000005548	-	67	47.959	ENSCAPG00000007631	-	63	47.959	Cavia_aperea
ENSCPBG00000005548	-	67	47.959	ENSCPOG00000003376	-	63	47.959	Cavia_porcellus
ENSCPBG00000005548	-	65	49.206	ENSCCAG00000009203	-	62	49.206	Cebus_capucinus
ENSCPBG00000005548	-	62	53.333	ENSCLAG00000001322	-	56	53.333	Chinchilla_lanigera
ENSCPBG00000005548	-	67	50.000	ENSCLAG00000001246	-	63	50.000	Chinchilla_lanigera
ENSCPBG00000005548	-	62	51.667	ENSCSAG00000006865	-	56	51.667	Chlorocebus_sabaeus
ENSCPBG00000005548	-	63	50.549	ENSCANG00000029802	-	59	50.549	Colobus_angolensis_palliatus
ENSCPBG00000005548	-	64	51.075	ENSCGRG00001024196	-	60	51.075	Cricetulus_griseus_chok1gshd
ENSCPBG00000005548	-	65	50.526	ENSCGRG00001024272	-	63	50.526	Cricetulus_griseus_chok1gshd
ENSCPBG00000005548	-	64	51.075	ENSCGRG00000015177	-	60	51.075	Cricetulus_griseus_crigri
ENSCPBG00000005548	-	65	50.526	ENSCGRG00000014686	-	63	50.526	Cricetulus_griseus_crigri
ENSCPBG00000005548	-	73	48.357	ENSECAG00000007668	-	68	48.804	Equus_caballus
ENSCPBG00000005548	-	83	42.188	ENSECAG00000007663	-	82	42.188	Equus_caballus
ENSCPBG00000005548	-	83	42.578	ENSECAG00000029716	-	81	42.578	Equus_caballus
ENSCPBG00000005548	-	62	50.000	ENSEEUG00000006852	-	67	49.189	Erinaceus_europaeus
ENSCPBG00000005548	-	68	50.254	ENSFCAG00000042622	-	64	50.254	Felis_catus
ENSCPBG00000005548	-	67	44.000	ENSGALG00000045581	-	51	44.000	Gallus_gallus
ENSCPBG00000005548	-	71	74.757	ENSGAGG00000015829	-	97	74.757	Gopherus_agassizii
ENSCPBG00000005548	-	70	74.146	ENSGAGG00000015825	-	72	74.146	Gopherus_agassizii
ENSCPBG00000005548	-	85	54.701	ENSGGOG00000014216	-	75	54.701	Gorilla_gorilla
ENSCPBG00000005548	-	66	51.042	ENSSTOG00000021076	-	63	51.042	Ictidomys_tridecemlineatus
ENSCPBG00000005548	-	70	37.931	ENSKMAG00000007013	-	70	37.714	Kryptolebias_marmoratus
ENSCPBG00000005548	-	62	51.667	ENSMFAG00000044951	-	56	51.667	Macaca_fascicularis
ENSCPBG00000005548	-	64	53.043	ENSMMUG00000001270	-	73	48.500	Macaca_mulatta
ENSCPBG00000005548	-	64	50.000	ENSMNEG00000028821	-	59	51.111	Macaca_nemestrina
ENSCPBG00000005548	-	64	50.000	ENSMLEG00000029622	-	61	50.000	Mandrillus_leucophaeus
ENSCPBG00000005548	-	67	48.718	ENSMICG00000027282	-	63	48.718	Microcebus_murinus
ENSCPBG00000005548	-	65	50.526	ENSMICG00000035983	-	61	50.526	Microcebus_murinus
ENSCPBG00000005548	-	64	51.613	ENSMOCG00000002213	-	83	51.613	Microtus_ochrogaster
ENSCPBG00000005548	-	82	41.406	ENSMOCG00000018608	-	85	41.406	Microtus_ochrogaster
ENSCPBG00000005548	-	65	51.064	ENSMODG00000003669	-	59	51.064	Monodelphis_domestica
ENSCPBG00000005548	-	69	49.010	MGP_CAROLIEiJ_G0028355	Gimap3	66	49.010	Mus_caroli
ENSCPBG00000005548	-	65	51.064	MGP_CAROLIEiJ_G0028354	Gimap5	61	51.064	Mus_caroli
ENSCPBG00000005548	-	69	48.515	ENSMUSG00000039264	Gimap3	68	48.571	Mus_musculus
ENSCPBG00000005548	-	65	50.532	ENSMUSG00000043505	Gimap5	61	50.532	Mus_musculus
ENSCPBG00000005548	-	69	50.000	MGP_PahariEiJ_G0022105	Gimap3	67	50.000	Mus_pahari
ENSCPBG00000005548	-	65	51.596	MGP_PahariEiJ_G0022104	Gimap5	61	51.596	Mus_pahari
ENSCPBG00000005548	-	78	48.899	ENSMLUG00000023466	-	77	48.899	Myotis_lucifugus
ENSCPBG00000005548	-	71	49.515	ENSMLUG00000028966	-	67	49.515	Myotis_lucifugus
ENSCPBG00000005548	-	63	45.946	ENSMLUG00000022809	-	72	45.946	Myotis_lucifugus
ENSCPBG00000005548	-	68	47.208	ENSMLUG00000026545	-	64	47.208	Myotis_lucifugus
ENSCPBG00000005548	-	71	48.544	ENSMLUG00000007287	-	66	48.544	Myotis_lucifugus
ENSCPBG00000005548	-	67	50.000	ENSMLUG00000025954	-	93	50.000	Myotis_lucifugus
ENSCPBG00000005548	-	73	49.296	ENSNGAG00000022013	-	69	49.296	Nannospalax_galili
ENSCPBG00000005548	-	82	43.922	ENSNGAG00000020526	-	85	43.922	Nannospalax_galili
ENSCPBG00000005548	-	85	41.328	ENSNLEG00000003844	-	87	41.791	Nomascus_leucogenys
ENSCPBG00000005548	-	71	49.765	ENSMEUG00000000849	-	78	49.765	Notamacropus_eugenii
ENSCPBG00000005548	-	77	47.807	ENSMEUG00000016596	-	82	47.807	Notamacropus_eugenii
ENSCPBG00000005548	-	60	50.857	ENSODEG00000011306	-	57	50.857	Octodon_degus
ENSCPBG00000005548	-	70	48.113	ENSOCUG00000005976	-	67	48.113	Oryctolagus_cuniculus
ENSCPBG00000005548	-	73	47.005	ENSOCUG00000025892	-	94	47.005	Oryctolagus_cuniculus
ENSCPBG00000005548	-	68	48.990	ENSOGAG00000009145	-	64	48.990	Otolemur_garnettii
ENSCPBG00000005548	-	65	48.947	ENSOARG00000001589	-	55	48.947	Ovis_aries
ENSCPBG00000005548	-	64	50.802	ENSOARG00000001645	-	61	50.802	Ovis_aries
ENSCPBG00000005548	-	65	49.474	ENSOARG00000001288	-	61	49.474	Ovis_aries
ENSCPBG00000005548	-	66	48.421	ENSOARG00000001183	-	88	48.421	Ovis_aries
ENSCPBG00000005548	-	85	53.226	ENSPPAG00000042001	-	73	54.701	Pan_paniscus
ENSCPBG00000005548	-	68	50.761	ENSPPRG00000017393	-	64	50.761	Panthera_pardus
ENSCPBG00000005548	-	68	50.761	ENSPTIG00000012405	-	64	50.761	Panthera_tigris_altaica
ENSCPBG00000005548	-	85	52.419	ENSPTRG00000034465	GIMAP1	73	53.846	Pan_troglodytes
ENSCPBG00000005548	-	85	52.419	ENSPTRG00000028356	-	73	53.846	Pan_troglodytes
ENSCPBG00000005548	-	64	51.075	ENSPANG00000030896	-	59	52.222	Papio_anubis
ENSCPBG00000005548	-	65	64.737	ENSPSIG00000000508	-	74	64.737	Pelodiscus_sinensis
ENSCPBG00000005548	-	76	49.115	ENSPSIG00000000573	-	95	49.115	Pelodiscus_sinensis
ENSCPBG00000005548	-	74	47.964	ENSPSIG00000016016	-	70	47.964	Pelodiscus_sinensis
ENSCPBG00000005548	-	69	59.901	ENSPSIG00000013467	-	88	59.901	Pelodiscus_sinensis
ENSCPBG00000005548	-	73	66.071	ENSPSIG00000006796	-	97	68.342	Pelodiscus_sinensis
ENSCPBG00000005548	-	71	48.309	ENSPEMG00000019236	-	68	48.309	Peromyscus_maniculatus_bairdii
ENSCPBG00000005548	-	74	46.262	ENSPEMG00000014554	-	72	46.262	Peromyscus_maniculatus_bairdii
ENSCPBG00000005548	-	70	45.894	ENSPCIG00000001766	-	73	45.894	Phascolarctos_cinereus
ENSCPBG00000005548	-	64	52.941	ENSPCIG00000008658	-	58	52.941	Phascolarctos_cinereus
ENSCPBG00000005548	-	81	41.434	ENSPPYG00000018173	-	76	41.434	Pongo_abelii
ENSCPBG00000005548	-	65	52.381	ENSPCOG00000016811	-	61	52.381	Propithecus_coquereli
ENSCPBG00000005548	-	67	48.259	ENSRNOG00000008416	Gimap5	72	47.297	Rattus_norvegicus
ENSCPBG00000005548	-	63	50.549	ENSRBIG00000035290	-	59	50.549	Rhinopithecus_bieti
ENSCPBG00000005548	-	63	50.549	ENSRROG00000028817	-	56	50.549	Rhinopithecus_roxellana
ENSCPBG00000005548	-	65	49.206	ENSSBOG00000032164	-	62	49.206	Saimiri_boliviensis_boliviensis
ENSCPBG00000005548	-	64	55.080	ENSSHAG00000000843	-	79	55.080	Sarcophilus_harrisii
ENSCPBG00000005548	-	66	47.396	ENSSARG00000004634	-	65	46.667	Sorex_araneus
ENSCPBG00000005548	-	56	66.871	ENSSPUG00000014119	-	75	66.871	Sphenodon_punctatus
ENSCPBG00000005548	-	75	64.398	ENSSPUG00000009917	-	73	64.433	Sphenodon_punctatus
ENSCPBG00000005548	-	67	64.286	ENSSPUG00000009833	-	75	64.286	Sphenodon_punctatus
ENSCPBG00000005548	-	68	58.883	ENSSPUG00000009907	-	89	58.883	Sphenodon_punctatus
ENSCPBG00000005548	-	65	59.474	ENSSPUG00000010046	-	66	59.474	Sphenodon_punctatus
ENSCPBG00000005548	-	69	62.189	ENSSPUG00000009760	-	89	62.189	Sphenodon_punctatus
ENSCPBG00000005548	-	65	63.492	ENSSPUG00000010036	-	65	63.492	Sphenodon_punctatus
ENSCPBG00000005548	-	79	56.332	ENSSPUG00000009848	-	79	56.332	Sphenodon_punctatus
ENSCPBG00000005548	-	81	56.356	ENSSPUG00000010063	-	79	56.356	Sphenodon_punctatus
ENSCPBG00000005548	-	66	48.958	ENSSSCG00000039407	-	63	48.958	Sus_scrofa
ENSCPBG00000005548	-	70	45.366	ENSTBEG00000000035	-	68	45.366	Tupaia_belangeri
ENSCPBG00000005548	-	65	49.468	ENSTTRG00000003204	-	64	49.468	Tursiops_truncatus
ENSCPBG00000005548	-	68	48.485	ENSTTRG00000011008	-	82	48.485	Tursiops_truncatus
ENSCPBG00000005548	-	65	52.105	ENSUMAG00000018133	-	65	54.032	Ursus_maritimus
ENSCPBG00000005548	-	69	48.259	ENSVPAG00000011693	-	65	48.259	Vicugna_pacos