EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCPBG00000005595 (Gene tree)
Gene ID
101947735
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Chrysemys_picta_bellii
Status
putative
Strand
Plus strand
Length
48805 bases
Position
chrKK083244.1:229609-278413
Accession
17042
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPBP00000007109RRM_1PF00076.221.3e-4312
ENSCPBP00000007109RRM_1PF00076.221.3e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPBT00000008565PUF60-2012703-ENSCPBP00000007109531 (aa)XP_005311683UPI000388ED07
Gene Model
Click here to download ENSCPBG00000005595's gene model file
Pathways
Pathway IDPathway NameSource
cpic03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000005595's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCPBG00000005595PUF606036.000ENSCPBG00000004485U2AF28337.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPBG00000005595PUF609997.727ENSG00000179950PUF6010098.256Homo_sapiens
ENSCPBG00000005595PUF609984.934ENSAPOG00000001713puf60b9885.496Acanthochromis_polyacanthus
ENSCPBG00000005595PUF609896.360ENSAMEG00000006406PUF609396.360Ailuropoda_melanoleuca
ENSCPBG00000005595PUF609777.351ENSACIG00000003263-9977.586Amphilophus_citrinellus
ENSCPBG00000005595PUF609785.221ENSACIG00000021705puf60b10085.029Amphilophus_citrinellus
ENSCPBG00000005595PUF609984.934ENSAOCG00000005395puf60b10085.988Amphiprion_ocellaris
ENSCPBG00000005595PUF609881.369ENSAOCG00000015558-9782.308Amphiprion_ocellaris
ENSCPBG00000005595PUF609879.696ENSAPEG00000011923puf60b9879.962Amphiprion_percula
ENSCPBG00000005595PUF609772.937ENSAPEG00000001836-9973.574Amphiprion_percula
ENSCPBG00000005595PUF609981.061ENSATEG00000006303-9882.184Anabas_testudineus
ENSCPBG00000005595PUF609885.199ENSATEG00000001730puf60b9885.333Anabas_testudineus
ENSCPBG00000005595PUF609899.042ENSAPLG00000010150PUF6010099.042Anas_platyrhynchos
ENSCPBG00000005595PUF6010095.725ENSACAG00000001645PUF609995.725Anolis_carolinensis
ENSCPBG00000005595PUF609997.901ENSANAG00000018626PUF6010098.256Aotus_nancymaae
ENSCPBG00000005595PUF609785.221ENSACLG00000004462puf60b10085.029Astatotilapia_calliptera
ENSCPBG00000005595PUF609884.673ENSAMXG00000036570puf60a10081.455Astyanax_mexicanus
ENSCPBG00000005595PUF609777.009ENSAMXG00000041030puf60b10074.532Astyanax_mexicanus
ENSCPBG00000005595PUF609997.917ENSBTAG00000037493PUF609998.276Bos_taurus
ENSCPBG00000005595PUF608050.162WBGene00004389rnp-68351.485Caenorhabditis_elegans
ENSCPBG00000005595PUF609997.917ENSCJAG00000021485PUF609997.917Callithrix_jacchus
ENSCPBG00000005595PUF609898.084ENSCAFG00000001400PUF609398.084Canis_familiaris
ENSCPBG00000005595PUF609998.106ENSCAFG00020018754PUF609998.106Canis_lupus_dingo
ENSCPBG00000005595PUF609898.276ENSCHIG00000001618PUF608798.276Capra_hircus
ENSCPBG00000005595PUF609998.295ENSTSYG00000011912PUF6010098.643Carlito_syrichta
ENSCPBG00000005595PUF609892.966ENSCPOG00000014613PUF609492.748Cavia_porcellus
ENSCPBG00000005595PUF609997.727ENSCCAG00000007744PUF609997.727Cebus_capucinus
ENSCPBG00000005595PUF609997.727ENSCATG00000035405PUF609997.727Cercocebus_atys
ENSCPBG00000005595PUF609898.659ENSCLAG00000009154PUF609398.659Chinchilla_lanigera
ENSCPBG00000005595PUF609798.256ENSCSAG00000008878PUF6010098.256Chlorocebus_sabaeus
ENSCPBG00000005595PUF609948.624ENSCING00000008436-9848.496Ciona_intestinalis
ENSCPBG00000005595PUF606259.882ENSCING00000002156-8759.882Ciona_intestinalis
ENSCPBG00000005595PUF609555.449ENSCSAVG00000001385-10054.701Ciona_savignyi
ENSCPBG00000005595PUF609549.407ENSCSAVG00000004765-9749.206Ciona_savignyi
ENSCPBG00000005595PUF607998.082ENSCANG00000041843PUF6010098.082Colobus_angolensis_palliatus
ENSCPBG00000005595PUF609898.084ENSCGRG00001017442Puf609398.084Cricetulus_griseus_chok1gshd
ENSCPBG00000005595PUF609898.084ENSCGRG00000003717Puf609398.084Cricetulus_griseus_crigri
ENSCPBG00000005595PUF609885.769ENSCSEG00000019887puf60b9285.905Cynoglossus_semilaevis
ENSCPBG00000005595PUF609971.881ENSCSEG00000014845-8974.952Cynoglossus_semilaevis
ENSCPBG00000005595PUF609784.261ENSCVAG00000009386puf60b10085.221Cyprinodon_variegatus
ENSCPBG00000005595PUF608980.169ENSCVAG00000001560-9880.169Cyprinodon_variegatus
ENSCPBG00000005595PUF609786.932ENSDARG00000032175puf60a9993.617Danio_rerio
ENSCPBG00000005595PUF609779.135ENSDARG00000001241puf60b9995.238Danio_rerio
ENSCPBG00000005595PUF609583.432ENSDNOG00000043278PUF609083.432Dasypus_novemcinctus
ENSCPBG00000005595PUF609898.467ENSDORG00000004585Puf609598.467Dipodomys_ordii
ENSCPBG00000005595PUF609549.313FBgn0028577hfp9950.534Drosophila_melanogaster
ENSCPBG00000005595PUF609861.214ENSEBUG00000014291puf60b8464.555Eptatretus_burgeri
ENSCPBG00000005595PUF609570.437ENSEBUG00000005470-8869.980Eptatretus_burgeri
ENSCPBG00000005595PUF609998.106ENSEASG00005009695PUF609998.106Equus_asinus_asinus
ENSCPBG00000005595PUF609998.473ENSECAG00000024681PUF609898.473Equus_caballus
ENSCPBG00000005595PUF609985.366ENSELUG00000018443-9885.985Esox_lucius
ENSCPBG00000005595PUF609983.083ENSELUG00000006507puf60b9981.136Esox_lucius
ENSCPBG00000005595PUF609997.727ENSFCAG00000001045PUF6010098.256Felis_catus
ENSCPBG00000005595PUF609885.851ENSFALG00000001136PUF609886.948Ficedula_albicollis
ENSCPBG00000005595PUF609898.659ENSFDAG00000017177PUF609398.659Fukomys_damarensis
ENSCPBG00000005595PUF609983.804ENSFHEG00000020046puf60b10085.605Fundulus_heteroclitus
ENSCPBG00000005595PUF609379.719ENSFHEG00000021687PUF6010080.777Fundulus_heteroclitus
ENSCPBG00000005595PUF609871.992ENSGMOG00000006392puf60b9971.132Gadus_morhua
ENSCPBG00000005595PUF606598.256ENSGALG00000039901PUF609498.256Gallus_gallus
ENSCPBG00000005595PUF609983.804ENSGAFG00000021040puf60b10085.605Gambusia_affinis
ENSCPBG00000005595PUF609779.151ENSGAFG00000004334-9979.184Gambusia_affinis
ENSCPBG00000005595PUF609973.596ENSGACG00000004717puf60b9873.714Gasterosteus_aculeatus
ENSCPBG00000005595PUF609969.829ENSGACG00000001484-10070.349Gasterosteus_aculeatus
ENSCPBG00000005595PUF60100100.000ENSGAGG00000013289PUF6093100.000Gopherus_agassizii
ENSCPBG00000005595PUF609997.727ENSGGOG00000004646PUF609997.727Gorilla_gorilla
ENSCPBG00000005595PUF609980.943ENSHBUG00000009634-9882.150Haplochromis_burtoni
ENSCPBG00000005595PUF609984.369ENSHBUG00000015118puf60b10085.029Haplochromis_burtoni
ENSCPBG00000005595PUF609898.659ENSHGLG00000006111PUF609398.659Heterocephalus_glaber_female
ENSCPBG00000005595PUF609898.659ENSHGLG00100012362PUF609398.659Heterocephalus_glaber_male
ENSCPBG00000005595PUF609881.181ENSHCOG00000015541puf60b10081.734Hippocampus_comes
ENSCPBG00000005595PUF609567.191ENSHCOG00000000378-9965.038Hippocampus_comes
ENSCPBG00000005595PUF609778.692ENSIPUG00000004660puf60b9978.759Ictalurus_punctatus
ENSCPBG00000005595PUF609782.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSCPBG00000005595PUF609898.659ENSSTOG00000025037PUF609498.659Ictidomys_tridecemlineatus
ENSCPBG00000005595PUF609898.276ENSJJAG00000001076Puf609398.276Jaculus_jaculus
ENSCPBG00000005595PUF609784.645ENSKMAG00000016745puf60b10085.605Kryptolebias_marmoratus
ENSCPBG00000005595PUF609777.883ENSKMAG00000010106-10075.373Kryptolebias_marmoratus
ENSCPBG00000005595PUF609884.416ENSLBEG00000012505puf60b10084.416Labrus_bergylta
ENSCPBG00000005595PUF606891.460ENSLACG00000005456PUF609991.460Latimeria_chalumnae
ENSCPBG00000005595PUF609990.720ENSLOCG00000010106puf60b9891.396Lepisosteus_oculatus
ENSCPBG00000005595PUF609897.318ENSLAFG00000022929PUF609497.318Loxodonta_africana
ENSCPBG00000005595PUF609997.727ENSMFAG00000043373PUF609997.727Macaca_fascicularis
ENSCPBG00000005595PUF609997.727ENSMMUG00000013558PUF609997.727Macaca_mulatta
ENSCPBG00000005595PUF609997.727ENSMNEG00000031099PUF609997.727Macaca_nemestrina
ENSCPBG00000005595PUF609798.256ENSMLEG00000040009PUF6010098.256Mandrillus_leucophaeus
ENSCPBG00000005595PUF609982.453ENSMAMG00000019476-9883.301Mastacembelus_armatus
ENSCPBG00000005595PUF609885.227ENSMAMG00000010394puf60b10083.925Mastacembelus_armatus
ENSCPBG00000005595PUF609785.221ENSMZEG00005018515puf60b10085.029Maylandia_zebra
ENSCPBG00000005595PUF609981.132ENSMZEG00005019425-9882.342Maylandia_zebra
ENSCPBG00000005595PUF609899.042ENSMGAG00000013070PUF609899.042Meleagris_gallopavo
ENSCPBG00000005595PUF606998.361ENSMAUG00000014267-9098.361Mesocricetus_auratus
ENSCPBG00000005595PUF609379.760ENSMAUG00000018549-9579.760Mesocricetus_auratus
ENSCPBG00000005595PUF609998.106ENSMICG00000012226PUF609998.106Microcebus_murinus
ENSCPBG00000005595PUF609898.084ENSMOCG00000018780Puf609398.084Microtus_ochrogaster
ENSCPBG00000005595PUF609872.849ENSMMOG00000018059-9976.941Mola_mola
ENSCPBG00000005595PUF609785.988ENSMMOG00000004217puf60b10085.605Mola_mola
ENSCPBG00000005595PUF609898.084ENSMODG00000009161PUF609498.084Monodelphis_domestica
ENSCPBG00000005595PUF609878.178ENSMALG00000006797puf60b9877.905Monopterus_albus
ENSCPBG00000005595PUF609980.377ENSMALG00000000200-9880.153Monopterus_albus
ENSCPBG00000005595PUF609898.276MGP_CAROLIEiJ_G0019910Puf609398.276Mus_caroli
ENSCPBG00000005595PUF609898.276ENSMUSG00000002524Puf609398.276Mus_musculus
ENSCPBG00000005595PUF609898.276MGP_PahariEiJ_G0019920Puf609398.276Mus_pahari
ENSCPBG00000005595PUF609898.276MGP_SPRETEiJ_G0020812Puf609398.276Mus_spretus
ENSCPBG00000005595PUF609898.276ENSMPUG00000008137PUF609298.276Mustela_putorius_furo
ENSCPBG00000005595PUF609897.701ENSMLUG00000000238-9397.701Myotis_lucifugus
ENSCPBG00000005595PUF609990.720ENSMLUG00000013032-9891.346Myotis_lucifugus
ENSCPBG00000005595PUF609898.276ENSNGAG00000000712Puf6010098.450Nannospalax_galili
ENSCPBG00000005595PUF609981.474ENSNBRG00000017223-9882.692Neolamprologus_brichardi
ENSCPBG00000005595PUF608280.795ENSNBRG00000013047puf60b9783.529Neolamprologus_brichardi
ENSCPBG00000005595PUF609997.529ENSNLEG00000002156PUF609997.529Nomascus_leucogenys
ENSCPBG00000005595PUF607399.317ENSOPRG00000002147PUF607599.317Ochotona_princeps
ENSCPBG00000005595PUF609573.570ENSODEG00000015513-9671.954Octodon_degus
ENSCPBG00000005595PUF6071100.000ENSODEG00000014024-90100.000Octodon_degus
ENSCPBG00000005595PUF609884.630ENSONIG00000006247puf60b9884.571Oreochromis_niloticus
ENSCPBG00000005595PUF609981.356ENSONIG00000014030-9782.534Oreochromis_niloticus
ENSCPBG00000005595PUF609678.210ENSOANG00000006962PUF609878.585Ornithorhynchus_anatinus
ENSCPBG00000005595PUF609778.598ENSORLG00000028655-9978.137Oryzias_latipes
ENSCPBG00000005595PUF609984.774ENSORLG00000012279puf60b10085.029Oryzias_latipes
ENSCPBG00000005595PUF609978.049ENSORLG00020018144-9878.286Oryzias_latipes_hni
ENSCPBG00000005595PUF609984.774ENSORLG00020007333puf6010085.029Oryzias_latipes_hni
ENSCPBG00000005595PUF609983.895ENSORLG00015007718puf60b10084.895Oryzias_latipes_hsok
ENSCPBG00000005595PUF609878.748ENSORLG00015016833-9878.286Oryzias_latipes_hsok
ENSCPBG00000005595PUF609982.505ENSOMEG00000001643puf60b9983.434Oryzias_melastigma
ENSCPBG00000005595PUF609979.434ENSOMEG00000022185-9780.422Oryzias_melastigma
ENSCPBG00000005595PUF609898.659ENSOGAG00000006259PUF609398.659Otolemur_garnettii
ENSCPBG00000005595PUF609895.785ENSOARG00000016235PUF609895.785Ovis_aries
ENSCPBG00000005595PUF609997.727ENSPPAG00000029933PUF609997.727Pan_paniscus
ENSCPBG00000005595PUF609997.727ENSPPRG00000003257PUF6010098.256Panthera_pardus
ENSCPBG00000005595PUF609895.785ENSPTIG00000009795PUF609995.785Panthera_tigris_altaica
ENSCPBG00000005595PUF609997.338ENSPTRG00000043963-9997.338Pan_troglodytes
ENSCPBG00000005595PUF609997.538ENSPTRG00000020670PUF609997.538Pan_troglodytes
ENSCPBG00000005595PUF609997.727ENSPANG00000021936PUF609997.727Papio_anubis
ENSCPBG00000005595PUF609986.466ENSPKIG00000004295puf60a9992.353Paramormyrops_kingsleyae
ENSCPBG00000005595PUF609987.524ENSPKIG00000012204puf60b10088.462Paramormyrops_kingsleyae
ENSCPBG00000005595PUF609899.234ENSPSIG00000004679PUF609999.234Pelodiscus_sinensis
ENSCPBG00000005595PUF609783.969ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSCPBG00000005595PUF609898.084ENSPEMG00000008820Puf609398.084Peromyscus_maniculatus_bairdii
ENSCPBG00000005595PUF609998.282ENSPCIG00000020270PUF609998.282Phascolarctos_cinereus
ENSCPBG00000005595PUF609983.804ENSPFOG00000019217puf60b9981.905Poecilia_formosa
ENSCPBG00000005595PUF609979.507ENSPFOG00000011118-9781.081Poecilia_formosa
ENSCPBG00000005595PUF609979.507ENSPLAG00000017025-9080.695Poecilia_latipinna
ENSCPBG00000005595PUF609784.645ENSPLAG00000010754puf60b10085.605Poecilia_latipinna
ENSCPBG00000005595PUF609983.804ENSPMEG00000000838puf60b10085.605Poecilia_mexicana
ENSCPBG00000005595PUF609979.696ENSPMEG00000009767-9081.274Poecilia_mexicana
ENSCPBG00000005595PUF609981.101ENSPREG00000005440puf60b9883.735Poecilia_reticulata
ENSCPBG00000005595PUF607996.403ENSPPYG00000018951-9596.403Pongo_abelii
ENSCPBG00000005595PUF607998.561ENSPCAG00000014837PUF6010098.561Procavia_capensis
ENSCPBG00000005595PUF609998.282ENSPCOG00000027981PUF609998.282Propithecus_coquereli
ENSCPBG00000005595PUF609799.367ENSPVAG00000016167PUF608199.367Pteropus_vampyrus
ENSCPBG00000005595PUF609785.221ENSPNYG00000002556puf60b10085.029Pundamilia_nyererei
ENSCPBG00000005595PUF609981.132ENSPNYG00000004273-9882.342Pundamilia_nyererei
ENSCPBG00000005595PUF609882.642ENSPNAG00000019909puf60a9982.576Pygocentrus_nattereri
ENSCPBG00000005595PUF609877.333ENSPNAG00000019415puf60b9074.618Pygocentrus_nattereri
ENSCPBG00000005595PUF609898.276ENSRNOG00000009960Puf609398.276Rattus_norvegicus
ENSCPBG00000005595PUF609997.727ENSRBIG00000035274PUF609997.727Rhinopithecus_bieti
ENSCPBG00000005595PUF609997.727ENSRROG00000029360PUF609997.897Rhinopithecus_roxellana
ENSCPBG00000005595PUF6010095.857ENSSBOG00000027089PUF6010095.857Saimiri_boliviensis_boliviensis
ENSCPBG00000005595PUF608997.660ENSSHAG00000006668PUF609097.660Sarcophilus_harrisii
ENSCPBG00000005595PUF609981.982ENSSFOG00015019371puf60a9887.928Scleropages_formosus
ENSCPBG00000005595PUF609782.857ENSSFOG00015019619puf60b9986.437Scleropages_formosus
ENSCPBG00000005595PUF607391.638ENSSMAG00000016381puf60b7392.883Scophthalmus_maximus
ENSCPBG00000005595PUF609880.455ENSSDUG00000007048-9780.695Seriola_dumerili
ENSCPBG00000005595PUF609883.488ENSSDUG00000009935puf60b9984.242Seriola_dumerili
ENSCPBG00000005595PUF609885.687ENSSLDG00000024011puf60b10083.551Seriola_lalandi_dorsalis
ENSCPBG00000005595PUF609780.989ENSSLDG00000007366-9980.266Seriola_lalandi_dorsalis
ENSCPBG00000005595PUF606486.726ENSSPUG00000013518PUF609485.549Sphenodon_punctatus
ENSCPBG00000005595PUF609782.061ENSSPAG00000020285-10082.634Stegastes_partitus
ENSCPBG00000005595PUF609982.385ENSSPAG00000012144puf60b10083.738Stegastes_partitus
ENSCPBG00000005595PUF609897.893ENSSSCG00000038800PUF609994.318Sus_scrofa
ENSCPBG00000005595PUF609895.402ENSTGUG00000012797-9995.385Taeniopygia_guttata
ENSCPBG00000005595PUF609777.519ENSTRUG00000008843-10077.519Takifugu_rubripes
ENSCPBG00000005595PUF609884.820ENSTRUG00000005420puf60b10083.178Takifugu_rubripes
ENSCPBG00000005595PUF609884.630ENSTNIG00000013675puf60b9984.762Tetraodon_nigroviridis
ENSCPBG00000005595PUF609877.969ENSTNIG00000003069-9978.613Tetraodon_nigroviridis
ENSCPBG00000005595PUF607579.769ENSTBEG00000001899-10080.925Tupaia_belangeri
ENSCPBG00000005595PUF606095.946ENSTBEG00000002751-9995.946Tupaia_belangeri
ENSCPBG00000005595PUF609797.868ENSTTRG00000017088PUF6010097.868Tursiops_truncatus
ENSCPBG00000005595PUF609998.106ENSUAMG00000024917PUF609998.106Ursus_americanus
ENSCPBG00000005595PUF609893.295ENSUMAG00000000272PUF609393.077Ursus_maritimus
ENSCPBG00000005595PUF609898.467ENSVVUG00000022527PUF6010098.643Vulpes_vulpes
ENSCPBG00000005595PUF609994.129ENSXETG00000012469puf609895.385Xenopus_tropicalis
ENSCPBG00000005595PUF609781.382ENSXCOG00000012355puf60b10082.342Xiphophorus_couchianus
ENSCPBG00000005595PUF609877.481ENSXMAG00000010507-9877.992Xiphophorus_maculatus
ENSCPBG00000005595PUF609983.804ENSXMAG00000001862puf60b10085.605Xiphophorus_maculatus

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