EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000005599 (Gene tree)
Gene ID: 101940587
Gene Symbol: ARL13B
Alias: ARL2L1|DKFZp761H079|JBTS8
Full Name: ADP ribosylation factor like GTPase 13B
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 83466 bases
Position: chr1:32858719-32942184
Accession: 25419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000007113	MMR_HSR1	PF01926.23	3.8e-05	1	1
ENSCPBP00000007120	MMR_HSR1	PF01926.23	3.9e-05	1	1
ENSCPBP00000007110	MMR_HSR1	PF01926.23	4.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000008569	ARL13B-202	3497	-	ENSCPBP00000007113	409 (aa)	-	UPI000388E73D
ENSCPBT00000008566	ARL13B-201	3566	-	ENSCPBP00000007110	432 (aa)	XP_005283709	UPI000388ADDB
ENSCPBT00000008576	ARL13B-203	1711	XM_005283654	ENSCPBP00000007120	412 (aa)	XP_005283711	UPI000388FCBE

Gene Model

Click here to download ENSCPBG00000005599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000005599's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000005599	ARL13B	52	52.582	ENSCPBG00000014304	ARL13A	78	53.431

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000005599	ARL13B	99	63.573	ENSAPOG00000013256	arl13b	99	63.805	Acanthochromis_polyacanthus
ENSCPBG00000005599	ARL13B	100	62.500	ENSACIG00000017582	arl13b	92	81.614	Amphilophus_citrinellus
ENSCPBG00000005599	ARL13B	99	63.341	ENSAOCG00000002828	arl13b	99	63.341	Amphiprion_ocellaris
ENSCPBG00000005599	ARL13B	94	62.654	ENSAPEG00000014654	arl13b	99	63.636	Amphiprion_percula
ENSCPBG00000005599	ARL13B	95	61.594	ENSATEG00000017586	arl13b	97	61.650	Anabas_testudineus
ENSCPBG00000005599	ARL13B	96	75.556	ENSACAG00000000523	ARL13B	99	78.469	Anolis_carolinensis
ENSCPBG00000005599	ARL13B	100	61.432	ENSACLG00000024227	arl13b	96	75.221	Astatotilapia_calliptera
ENSCPBG00000005599	ARL13B	100	62.759	ENSAMXG00000042824	arl13b	100	62.187	Astyanax_mexicanus
ENSCPBG00000005599	ARL13B	68	89.163	ENSCAPG00000006764	ARL13B	82	89.163	Cavia_aperea
ENSCPBG00000005599	ARL13B	99	65.501	ENSCPOG00000002558	ARL13B	99	66.744	Cavia_porcellus
ENSCPBG00000005599	ARL13B	95	70.460	ENSCLAG00000006379	ARL13B	100	71.186	Chinchilla_lanigera
ENSCPBG00000005599	ARL13B	99	60.508	ENSCSEG00000005258	arl13b	99	59.862	Cynoglossus_semilaevis
ENSCPBG00000005599	ARL13B	100	61.894	ENSCVAG00000001545	arl13b	88	79.372	Cyprinodon_variegatus
ENSCPBG00000005599	ARL13B	100	65.057	ENSDARG00000012763	arl13b	85	82.063	Danio_rerio
ENSCPBG00000005599	ARL13B	66	52.985	ENSEBUG00000006528	arl13b	90	52.985	Eptatretus_burgeri
ENSCPBG00000005599	ARL13B	100	67.742	ENSEEUG00000010823	ARL13B	100	68.433	Erinaceus_europaeus
ENSCPBG00000005599	ARL13B	99	67.647	ENSFALG00000001654	ARL13B	99	73.529	Ficedula_albicollis
ENSCPBG00000005599	ARL13B	100	75.520	ENSFDAG00000006556	ARL13B	100	76.674	Fukomys_damarensis
ENSCPBG00000005599	ARL13B	94	59.951	ENSFHEG00000016049	arl13b	99	58.968	Fundulus_heteroclitus
ENSCPBG00000005599	ARL13B	79	70.703	ENSGMOG00000018628	arl13b	97	72.332	Gadus_morhua
ENSCPBG00000005599	ARL13B	98	60.235	ENSGAFG00000000025	arl13b	83	79.821	Gambusia_affinis
ENSCPBG00000005599	ARL13B	99	59.722	ENSGACG00000014228	arl13b	99	61.609	Gasterosteus_aculeatus
ENSCPBG00000005599	ARL13B	100	95.844	ENSGAGG00000019336	ARL13B	100	95.844	Gopherus_agassizii
ENSCPBG00000005599	ARL13B	100	62.818	ENSHBUG00000020619	arl13b	100	62.100	Haplochromis_burtoni
ENSCPBG00000005599	ARL13B	94	62.103	ENSHCOG00000006106	arl13b	99	61.614	Hippocampus_comes
ENSCPBG00000005599	ARL13B	99	62.181	ENSKMAG00000001122	arl13b	99	62.645	Kryptolebias_marmoratus
ENSCPBG00000005599	ARL13B	99	62.413	ENSLBEG00000014612	arl13b	99	60.959	Labrus_bergylta
ENSCPBG00000005599	ARL13B	100	69.248	ENSLOCG00000010465	arl13b	100	69.704	Lepisosteus_oculatus
ENSCPBG00000005599	ARL13B	99	62.645	ENSMAMG00000021452	arl13b	99	62.413	Mastacembelus_armatus
ENSCPBG00000005599	ARL13B	100	63.510	ENSMZEG00005017827	arl13b	100	62.818	Maylandia_zebra
ENSCPBG00000005599	ARL13B	99	60.508	ENSMMOG00000010253	arl13b	99	58.891	Mola_mola
ENSCPBG00000005599	ARL13B	83	72.426	ENSMALG00000014655	arl13b	99	73.626	Monopterus_albus
ENSCPBG00000005599	ARL13B	100	73.148	MGP_CAROLIEiJ_G0020856	Arl13b	100	72.917	Mus_caroli
ENSCPBG00000005599	ARL13B	100	73.441	ENSMUSG00000022911	Arl13b	100	73.441	Mus_musculus
ENSCPBG00000005599	ARL13B	100	72.979	MGP_PahariEiJ_G0016561	Arl13b	100	72.979	Mus_pahari
ENSCPBG00000005599	ARL13B	100	73.441	MGP_SPRETEiJ_G0021763	Arl13b	100	73.441	Mus_spretus
ENSCPBG00000005599	ARL13B	96	76.386	ENSMLUG00000017473	ARL13B	96	76.386	Myotis_lucifugus
ENSCPBG00000005599	ARL13B	100	58.430	ENSNBRG00000004078	arl13b	90	81.614	Neolamprologus_brichardi
ENSCPBG00000005599	ARL13B	100	70.901	ENSNLEG00000001772	ARL13B	100	70.901	Nomascus_leucogenys
ENSCPBG00000005599	ARL13B	74	69.758	ENSMEUG00000008036	-	78	69.758	Notamacropus_eugenii
ENSCPBG00000005599	ARL13B	100	74.365	ENSODEG00000011381	ARL13B	100	74.365	Octodon_degus
ENSCPBG00000005599	ARL13B	100	62.415	ENSONIG00000001864	arl13b	100	62.415	Oreochromis_niloticus
ENSCPBG00000005599	ARL13B	99	60.829	ENSORLG00000006350	arl13b	88	81.614	Oryzias_latipes
ENSCPBG00000005599	ARL13B	99	61.521	ENSORLG00020013754	arl13b	99	62.442	Oryzias_latipes_hni
ENSCPBG00000005599	ARL13B	99	62.212	ENSORLG00015012586	arl13b	99	61.982	Oryzias_latipes_hsok
ENSCPBG00000005599	ARL13B	53	76.959	ENSOMEG00000010187	arl13b	87	77.578	Oryzias_melastigma
ENSCPBG00000005599	ARL13B	94	91.646	ENSPSIG00000018115	ARL13B	99	91.646	Pelodiscus_sinensis
ENSCPBG00000005599	ARL13B	99	62.818	ENSPMGG00000004584	arl13b	99	62.587	Periophthalmus_magnuspinnatus
ENSCPBG00000005599	ARL13B	100	59.589	ENSPCIG00000026984	ARL13B	98	58.219	Phascolarctos_cinereus
ENSCPBG00000005599	ARL13B	100	59.954	ENSPFOG00000005379	arl13b	100	60.185	Poecilia_formosa
ENSCPBG00000005599	ARL13B	94	59.214	ENSPLAG00000008699	arl13b	99	59.459	Poecilia_latipinna
ENSCPBG00000005599	ARL13B	96	58.795	ENSPMEG00000015387	arl13b	99	58.554	Poecilia_mexicana
ENSCPBG00000005599	ARL13B	100	59.954	ENSPREG00000006291	arl13b	100	60.648	Poecilia_reticulata
ENSCPBG00000005599	ARL13B	96	60.386	ENSPNYG00000022879	arl13b	98	56.490	Pundamilia_nyererei
ENSCPBG00000005599	ARL13B	100	62.269	ENSPNAG00000003803	arl13b	100	63.678	Pygocentrus_nattereri
ENSCPBG00000005599	ARL13B	55	74.222	ENSSFOG00015005491	arl13b	86	74.324	Scleropages_formosus
ENSCPBG00000005599	ARL13B	52	67.593	ENSSFOG00015023057	arl13b	85	67.593	Scleropages_formosus
ENSCPBG00000005599	ARL13B	99	59.815	ENSSMAG00000015450	arl13b	99	60.227	Scophthalmus_maximus
ENSCPBG00000005599	ARL13B	94	63.725	ENSSDUG00000005560	arl13b	96	63.971	Seriola_dumerili
ENSCPBG00000005599	ARL13B	94	63.725	ENSSLDG00000013361	arl13b	99	63.971	Seriola_lalandi_dorsalis
ENSCPBG00000005599	ARL13B	99	75.406	ENSSARG00000003872	ARL13B	99	75.406	Sorex_araneus
ENSCPBG00000005599	ARL13B	56	93.913	ENSSPUG00000006649	ARL13B	91	93.722	Sphenodon_punctatus
ENSCPBG00000005599	ARL13B	97	63.484	ENSSPAG00000016442	arl13b	91	62.824	Stegastes_partitus
ENSCPBG00000005599	ARL13B	100	73.516	ENSTGUG00000013493	ARL13B	100	73.272	Taeniopygia_guttata
ENSCPBG00000005599	ARL13B	52	66.981	ENSTRUG00000003641	arl13b	78	66.341	Takifugu_rubripes
ENSCPBG00000005599	ARL13B	100	51.276	ENSTRUG00000013035	-	87	67.265	Takifugu_rubripes
ENSCPBG00000005599	ARL13B	100	76.585	ENSVVUG00000021511	ARL13B	100	76.585	Vulpes_vulpes
ENSCPBG00000005599	ARL13B	67	35.740	ENSXETG00000026166	arl13a	50	40.376	Xenopus_tropicalis
ENSCPBG00000005599	ARL13B	100	69.178	ENSXETG00000032383	ARL13B	100	78.623	Xenopus_tropicalis
ENSCPBG00000005599	ARL13B	100	56.724	ENSXCOG00000016955	arl13b	93	73.529	Xiphophorus_couchianus
ENSCPBG00000005599	ARL13B	98	60.000	ENSXMAG00000002089	arl13b	99	60.000	Xiphophorus_maculatus