EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000005675 (Gene tree)
Gene ID: 101946337
Gene Symbol: RAD54L
Alias: RAD54A|hHR54|hRAD54
Full Name: RAD54 like
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 21843 bases
Position: chr8:49996806-50018648
Accession: 9826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000007187	ResIII	PF04851.15	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000008676	RAD54L-201	2357	-	ENSCPBP00000007187	744 (aa)	XP_005303049	UPI0003890601

Gene Model

Click here to download ENSCPBG00000005675's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000005675's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000005675	RAD54L	65	35.349	ENSCPBG00000025739	HELLS	65	37.000
ENSCPBG00000005675	RAD54L	66	33.065	ENSCPBG00000018049	-	52	32.186
ENSCPBG00000005675	RAD54L	88	42.158	ENSCPBG00000003204	-	74	42.302
ENSCPBG00000005675	RAD54L	68	31.507	ENSCPBG00000002600	CHD1L	51	31.836
ENSCPBG00000005675	RAD54L	71	32.236	ENSCPBG00000011965	ERCC6L	82	32.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000005675	RAD54L	99	86.212	ENSG00000085999	RAD54L	100	94.667	Homo_sapiens
ENSCPBG00000005675	RAD54L	99	78.302	ENSAPOG00000011643	rad54l	99	78.302	Acanthochromis_polyacanthus
ENSCPBG00000005675	RAD54L	99	86.059	ENSAMEG00000013902	RAD54L	99	86.059	Ailuropoda_melanoleuca
ENSCPBG00000005675	RAD54L	99	80.458	ENSACIG00000001939	rad54l	99	80.458	Amphilophus_citrinellus
ENSCPBG00000005675	RAD54L	99	81.757	ENSAOCG00000017576	rad54l	99	81.757	Amphiprion_ocellaris
ENSCPBG00000005675	RAD54L	95	82.768	ENSAPEG00000020658	rad54l	98	82.768	Amphiprion_percula
ENSCPBG00000005675	RAD54L	94	83.262	ENSATEG00000006767	rad54l	99	83.262	Anabas_testudineus
ENSCPBG00000005675	RAD54L	94	92.593	ENSAPLG00000006389	RAD54L	100	92.593	Anas_platyrhynchos
ENSCPBG00000005675	RAD54L	100	91.398	ENSACAG00000002312	RAD54L	100	91.398	Anolis_carolinensis
ENSCPBG00000005675	RAD54L	99	86.212	ENSANAG00000035439	RAD54L	99	86.212	Aotus_nancymaae
ENSCPBG00000005675	RAD54L	99	79.812	ENSACLG00000018711	rad54l	99	79.812	Astatotilapia_calliptera
ENSCPBG00000005675	RAD54L	99	83.423	ENSAMXG00000012777	rad54l	99	83.423	Astyanax_mexicanus
ENSCPBG00000005675	RAD54L	99	86.096	ENSBTAG00000019901	RAD54L	99	86.096	Bos_taurus
ENSCPBG00000005675	RAD54L	93	59.137	WBGene00004298	rad-54	84	59.137	Caenorhabditis_elegans
ENSCPBG00000005675	RAD54L	97	86.740	ENSCJAG00000021080	RAD54L	92	86.740	Callithrix_jacchus
ENSCPBG00000005675	RAD54L	99	86.212	ENSCAFG00000004272	RAD54L	99	86.212	Canis_familiaris
ENSCPBG00000005675	RAD54L	99	86.193	ENSCAFG00020015066	RAD54L	99	86.193	Canis_lupus_dingo
ENSCPBG00000005675	RAD54L	99	86.212	ENSCHIG00000020118	RAD54L	99	86.212	Capra_hircus
ENSCPBG00000005675	RAD54L	99	85.274	ENSTSYG00000002032	RAD54L	99	85.274	Carlito_syrichta
ENSCPBG00000005675	RAD54L	99	87.282	ENSCPOG00000006768	RAD54L	99	87.282	Cavia_porcellus
ENSCPBG00000005675	RAD54L	99	86.479	ENSCCAG00000025783	RAD54L	99	86.479	Cebus_capucinus
ENSCPBG00000005675	RAD54L	99	86.613	ENSCATG00000030589	RAD54L	99	86.613	Cercocebus_atys
ENSCPBG00000005675	RAD54L	99	87.416	ENSCLAG00000004645	RAD54L	99	87.416	Chinchilla_lanigera
ENSCPBG00000005675	RAD54L	99	86.479	ENSCSAG00000001229	RAD54L	99	86.479	Chlorocebus_sabaeus
ENSCPBG00000005675	RAD54L	99	63.226	ENSCING00000024456	-	99	63.226	Ciona_intestinalis
ENSCPBG00000005675	RAD54L	99	62.794	ENSCSAVG00000010859	-	99	62.842	Ciona_savignyi
ENSCPBG00000005675	RAD54L	99	86.345	ENSCANG00000034891	RAD54L	99	86.345	Colobus_angolensis_palliatus
ENSCPBG00000005675	RAD54L	99	85.007	ENSCGRG00001014807	Rad54l	99	85.007	Cricetulus_griseus_chok1gshd
ENSCPBG00000005675	RAD54L	99	85.007	ENSCGRG00000016038	Rad54l	99	85.007	Cricetulus_griseus_crigri
ENSCPBG00000005675	RAD54L	99	79.408	ENSCSEG00000001983	rad54l	99	79.408	Cynoglossus_semilaevis
ENSCPBG00000005675	RAD54L	77	83.200	ENSCVAG00000019561	rad54l	99	83.200	Cyprinodon_variegatus
ENSCPBG00000005675	RAD54L	99	80.888	ENSDARG00000018623	rad54l	99	80.888	Danio_rerio
ENSCPBG00000005675	RAD54L	99	86.881	ENSDNOG00000003395	RAD54L	99	86.881	Dasypus_novemcinctus
ENSCPBG00000005675	RAD54L	99	78.238	ENSDORG00000002632	Rad54l	99	78.238	Dipodomys_ordii
ENSCPBG00000005675	RAD54L	99	55.040	FBgn0002989	okr	95	55.040	Drosophila_melanogaster
ENSCPBG00000005675	RAD54L	78	87.800	ENSETEG00000000550	RAD54L	78	87.800	Echinops_telfairi
ENSCPBG00000005675	RAD54L	99	86.059	ENSEASG00005004511	RAD54L	99	86.059	Equus_asinus_asinus
ENSCPBG00000005675	RAD54L	99	86.479	ENSECAG00000008760	RAD54L	99	87.544	Equus_caballus
ENSCPBG00000005675	RAD54L	99	82.195	ENSEEUG00000008113	RAD54L	99	82.195	Erinaceus_europaeus
ENSCPBG00000005675	RAD54L	99	82.597	ENSELUG00000002295	rad54l	99	82.597	Esox_lucius
ENSCPBG00000005675	RAD54L	99	85.676	ENSFCAG00000003444	RAD54L	99	85.676	Felis_catus
ENSCPBG00000005675	RAD54L	99	90.457	ENSFALG00000009480	RAD54L	100	90.726	Ficedula_albicollis
ENSCPBG00000005675	RAD54L	99	86.078	ENSFDAG00000007806	RAD54L	99	86.078	Fukomys_damarensis
ENSCPBG00000005675	RAD54L	61	78.936	ENSFHEG00000009824	rad54l	78	78.808	Fundulus_heteroclitus
ENSCPBG00000005675	RAD54L	99	80.189	ENSGMOG00000014568	rad54l	99	80.189	Gadus_morhua
ENSCPBG00000005675	RAD54L	100	91.398	ENSGALG00000010356	RAD54L	92	91.398	Gallus_gallus
ENSCPBG00000005675	RAD54L	91	80.088	ENSGAFG00000011110	rad54l	100	80.088	Gambusia_affinis
ENSCPBG00000005675	RAD54L	99	80.780	ENSGACG00000003111	rad54l	97	80.780	Gasterosteus_aculeatus
ENSCPBG00000005675	RAD54L	99	98.385	ENSGAGG00000014089	RAD54L	96	98.385	Gopherus_agassizii
ENSCPBG00000005675	RAD54L	99	86.078	ENSGGOG00000010602	RAD54L	99	86.078	Gorilla_gorilla
ENSCPBG00000005675	RAD54L	99	79.812	ENSHBUG00000007793	rad54l	99	79.812	Haplochromis_burtoni
ENSCPBG00000005675	RAD54L	99	86.747	ENSHGLG00000000753	RAD54L	99	86.747	Heterocephalus_glaber_female
ENSCPBG00000005675	RAD54L	99	86.613	ENSHGLG00100016987	RAD54L	99	86.613	Heterocephalus_glaber_male
ENSCPBG00000005675	RAD54L	99	81.392	ENSIPUG00000015999	rad54l	99	83.764	Ictalurus_punctatus
ENSCPBG00000005675	RAD54L	99	86.212	ENSSTOG00000029125	RAD54L	99	86.212	Ictidomys_tridecemlineatus
ENSCPBG00000005675	RAD54L	99	70.375	ENSJJAG00000000235	-	99	70.107	Jaculus_jaculus
ENSCPBG00000005675	RAD54L	99	80.619	ENSKMAG00000009944	rad54l	99	80.619	Kryptolebias_marmoratus
ENSCPBG00000005675	RAD54L	99	81.781	ENSLBEG00000014617	rad54l	97	84.375	Labrus_bergylta
ENSCPBG00000005675	RAD54L	99	83.311	ENSLOCG00000004144	rad54l	100	85.460	Lepisosteus_oculatus
ENSCPBG00000005675	RAD54L	99	86.997	ENSLAFG00000007583	RAD54L	99	87.399	Loxodonta_africana
ENSCPBG00000005675	RAD54L	99	86.747	ENSMFAG00000031241	RAD54L	99	86.747	Macaca_fascicularis
ENSCPBG00000005675	RAD54L	99	86.747	ENSMMUG00000011568	RAD54L	99	86.747	Macaca_mulatta
ENSCPBG00000005675	RAD54L	99	86.479	ENSMNEG00000038562	RAD54L	99	86.479	Macaca_nemestrina
ENSCPBG00000005675	RAD54L	99	86.613	ENSMLEG00000038145	RAD54L	99	86.613	Mandrillus_leucophaeus
ENSCPBG00000005675	RAD54L	99	81.377	ENSMAMG00000022180	rad54l	99	84.195	Mastacembelus_armatus
ENSCPBG00000005675	RAD54L	99	79.677	ENSMZEG00005018081	rad54l	99	79.677	Maylandia_zebra
ENSCPBG00000005675	RAD54L	99	91.117	ENSMGAG00000010634	RAD54L	99	91.117	Meleagris_gallopavo
ENSCPBG00000005675	RAD54L	99	85.408	ENSMAUG00000020076	Rad54l	99	85.408	Mesocricetus_auratus
ENSCPBG00000005675	RAD54L	99	87.015	ENSMICG00000003266	RAD54L	99	87.015	Microcebus_murinus
ENSCPBG00000005675	RAD54L	99	85.944	ENSMOCG00000001778	Rad54l	99	85.944	Microtus_ochrogaster
ENSCPBG00000005675	RAD54L	99	78.331	ENSMALG00000021148	rad54l	99	78.331	Monopterus_albus
ENSCPBG00000005675	RAD54L	99	80.990	MGP_CAROLIEiJ_G0026325	Rad54l	99	80.990	Mus_caroli
ENSCPBG00000005675	RAD54L	99	85.676	ENSMUSG00000028702	Rad54l	99	85.676	Mus_musculus
ENSCPBG00000005675	RAD54L	99	85.408	MGP_PahariEiJ_G0028657	Rad54l	99	85.408	Mus_pahari
ENSCPBG00000005675	RAD54L	99	85.810	MGP_SPRETEiJ_G0027297	Rad54l	99	85.810	Mus_spretus
ENSCPBG00000005675	RAD54L	99	85.944	ENSMPUG00000012883	RAD54L	99	85.944	Mustela_putorius_furo
ENSCPBG00000005675	RAD54L	99	86.729	ENSMLUG00000003763	RAD54L	99	86.729	Myotis_lucifugus
ENSCPBG00000005675	RAD54L	99	84.605	ENSNGAG00000024213	Rad54l	99	84.605	Nannospalax_galili
ENSCPBG00000005675	RAD54L	99	85.810	ENSNLEG00000016548	RAD54L	99	85.810	Nomascus_leucogenys
ENSCPBG00000005675	RAD54L	90	84.844	ENSMEUG00000006793	RAD54L	99	84.844	Notamacropus_eugenii
ENSCPBG00000005675	RAD54L	90	85.090	ENSOPRG00000016016	RAD54L	90	85.090	Ochotona_princeps
ENSCPBG00000005675	RAD54L	99	87.015	ENSODEG00000008519	RAD54L	99	87.015	Octodon_degus
ENSCPBG00000005675	RAD54L	99	79.677	ENSONIG00000007659	rad54l	99	79.677	Oreochromis_niloticus
ENSCPBG00000005675	RAD54L	99	86.479	ENSOCUG00000005229	RAD54L	99	86.479	Oryctolagus_cuniculus
ENSCPBG00000005675	RAD54L	99	79.650	ENSORLG00000002958	rad54l	99	80.054	Oryzias_latipes
ENSCPBG00000005675	RAD54L	100	80.108	ENSORLG00020006554	rad54l	99	82.966	Oryzias_latipes_hni
ENSCPBG00000005675	RAD54L	99	80.054	ENSORLG00015002907	rad54l	99	80.323	Oryzias_latipes_hsok
ENSCPBG00000005675	RAD54L	99	80.054	ENSOMEG00000007770	rad54l	99	80.054	Oryzias_melastigma
ENSCPBG00000005675	RAD54L	99	85.848	ENSOARG00000002264	RAD54L	99	85.848	Ovis_aries
ENSCPBG00000005675	RAD54L	99	86.345	ENSPPAG00000031222	RAD54L	99	86.345	Pan_paniscus
ENSCPBG00000005675	RAD54L	99	85.676	ENSPPRG00000010317	RAD54L	99	85.676	Panthera_pardus
ENSCPBG00000005675	RAD54L	99	85.676	ENSPTIG00000012200	RAD54L	99	85.676	Panthera_tigris_altaica
ENSCPBG00000005675	RAD54L	99	86.078	ENSPTRG00000000689	RAD54L	99	86.078	Pan_troglodytes
ENSCPBG00000005675	RAD54L	99	86.613	ENSPANG00000016295	RAD54L	99	86.613	Papio_anubis
ENSCPBG00000005675	RAD54L	99	77.058	ENSPKIG00000016172	rad54l	99	77.058	Paramormyrops_kingsleyae
ENSCPBG00000005675	RAD54L	99	96.599	ENSPSIG00000003258	RAD54L	100	96.599	Pelodiscus_sinensis
ENSCPBG00000005675	RAD54L	99	76.851	ENSPMGG00000016335	rad54l	99	76.851	Periophthalmus_magnuspinnatus
ENSCPBG00000005675	RAD54L	99	85.542	ENSPEMG00000011422	Rad54l	99	85.542	Peromyscus_maniculatus_bairdii
ENSCPBG00000005675	RAD54L	99	71.754	ENSPMAG00000007719	rad54l	99	71.754	Petromyzon_marinus
ENSCPBG00000005675	RAD54L	99	86.694	ENSPCIG00000029032	RAD54L	99	86.694	Phascolarctos_cinereus
ENSCPBG00000005675	RAD54L	85	82.492	ENSPFOG00000013732	rad54l	99	82.492	Poecilia_formosa
ENSCPBG00000005675	RAD54L	82	81.169	ENSPLAG00000023416	rad54l	99	81.169	Poecilia_latipinna
ENSCPBG00000005675	RAD54L	91	80.383	ENSPMEG00000008299	rad54l	100	80.383	Poecilia_mexicana
ENSCPBG00000005675	RAD54L	99	79.273	ENSPREG00000019955	rad54l	99	79.273	Poecilia_reticulata
ENSCPBG00000005675	RAD54L	99	72.861	ENSPPYG00000001398	RAD54L	99	72.861	Pongo_abelii
ENSCPBG00000005675	RAD54L	80	83.010	ENSPCAG00000005323	RAD54L	80	83.010	Procavia_capensis
ENSCPBG00000005675	RAD54L	99	87.149	ENSPCOG00000015423	RAD54L	99	87.149	Propithecus_coquereli
ENSCPBG00000005675	RAD54L	99	76.298	ENSPNYG00000002942	rad54l	99	76.298	Pundamilia_nyererei
ENSCPBG00000005675	RAD54L	99	82.638	ENSPNAG00000012483	rad54l	99	82.638	Pygocentrus_nattereri
ENSCPBG00000005675	RAD54L	99	85.542	ENSRNOG00000013148	Rad54l	99	85.542	Rattus_norvegicus
ENSCPBG00000005675	RAD54L	99	86.345	ENSRBIG00000043495	RAD54L	99	86.345	Rhinopithecus_bieti
ENSCPBG00000005675	RAD54L	99	86.479	ENSRROG00000020844	RAD54L	99	86.479	Rhinopithecus_roxellana
ENSCPBG00000005675	RAD54L	80	48.844	YGL163C	RAD54	71	48.844	Saccharomyces_cerevisiae
ENSCPBG00000005675	RAD54L	99	86.479	ENSSBOG00000024672	RAD54L	99	86.479	Saimiri_boliviensis_boliviensis
ENSCPBG00000005675	RAD54L	99	86.479	ENSSHAG00000000110	RAD54L	99	86.479	Sarcophilus_harrisii
ENSCPBG00000005675	RAD54L	99	81.292	ENSSDUG00000019147	rad54l	99	81.292	Seriola_dumerili
ENSCPBG00000005675	RAD54L	99	81.696	ENSSLDG00000012330	rad54l	99	81.696	Seriola_lalandi_dorsalis
ENSCPBG00000005675	RAD54L	84	83.814	ENSSARG00000006689	RAD54L	100	83.814	Sorex_araneus
ENSCPBG00000005675	RAD54L	99	79.408	ENSSPAG00000011016	rad54l	100	79.408	Stegastes_partitus
ENSCPBG00000005675	RAD54L	99	86.613	ENSSSCG00000003905	RAD54L	99	86.613	Sus_scrofa
ENSCPBG00000005675	RAD54L	99	89.919	ENSTGUG00000008233	RAD54L	100	90.323	Taeniopygia_guttata
ENSCPBG00000005675	RAD54L	99	76.447	ENSTRUG00000008410	rad54l	99	76.447	Takifugu_rubripes
ENSCPBG00000005675	RAD54L	99	75.806	ENSTNIG00000004716	rad54l	99	75.600	Tetraodon_nigroviridis
ENSCPBG00000005675	RAD54L	99	79.786	ENSTTRG00000006315	RAD54L	99	79.786	Tursiops_truncatus
ENSCPBG00000005675	RAD54L	99	85.580	ENSUAMG00000011824	RAD54L	99	85.580	Ursus_americanus
ENSCPBG00000005675	RAD54L	99	84.771	ENSUMAG00000023603	RAD54L	99	84.771	Ursus_maritimus
ENSCPBG00000005675	RAD54L	99	86.078	ENSVVUG00000007201	RAD54L	99	86.078	Vulpes_vulpes
ENSCPBG00000005675	RAD54L	96	80.866	ENSXETG00000004369	rad54l	99	80.866	Xenopus_tropicalis
ENSCPBG00000005675	RAD54L	55	75.000	ENSXCOG00000016028	rad54l	80	79.019	Xiphophorus_couchianus