EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000005677 (Gene tree)
Gene ID: 101950508
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 222752 bases
Position: chrKK082973.1:3471383-3694134
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000007190	S1	PF00575.23	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000008680	SRBD1-201	3983	XM_005296117	ENSCPBP00000007190	982 (aa)	XP_005296174	UPI000389182A

Gene Model

Click here to download ENSCPBG00000005677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000005677's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000005677	SRBD1	100	73.173	ENSG00000068784	SRBD1	100	73.400	Homo_sapiens
ENSCPBG00000005677	SRBD1	100	52.688	ENSAPOG00000005103	si:ch211-117n7.8	83	58.983	Acanthochromis_polyacanthus
ENSCPBG00000005677	SRBD1	100	74.141	ENSAMEG00000005993	SRBD1	100	74.141	Ailuropoda_melanoleuca
ENSCPBG00000005677	SRBD1	97	52.079	ENSACIG00000009875	si:ch211-117n7.8	98	53.043	Amphilophus_citrinellus
ENSCPBG00000005677	SRBD1	99	53.307	ENSAOCG00000024718	si:ch211-117n7.8	84	58.754	Amphiprion_ocellaris
ENSCPBG00000005677	SRBD1	97	54.750	ENSAPEG00000002645	si:ch211-117n7.8	98	54.611	Amphiprion_percula
ENSCPBG00000005677	SRBD1	98	53.916	ENSATEG00000010844	si:ch211-117n7.8	87	57.305	Anabas_testudineus
ENSCPBG00000005677	SRBD1	100	80.503	ENSAPLG00000006313	SRBD1	100	80.503	Anas_platyrhynchos
ENSCPBG00000005677	SRBD1	100	72.727	ENSANAG00000025573	SRBD1	100	72.954	Aotus_nancymaae
ENSCPBG00000005677	SRBD1	97	52.663	ENSACLG00000024219	si:ch211-117n7.8	82	58.588	Astatotilapia_calliptera
ENSCPBG00000005677	SRBD1	86	61.385	ENSAMXG00000004294	SRBD1	84	61.385	Astyanax_mexicanus
ENSCPBG00000005677	SRBD1	100	73.615	ENSBTAG00000007508	SRBD1	99	81.646	Bos_taurus
ENSCPBG00000005677	SRBD1	100	72.128	ENSCJAG00000000727	SRBD1	100	72.610	Callithrix_jacchus
ENSCPBG00000005677	SRBD1	100	74.194	ENSCAFG00000002554	SRBD1	100	73.992	Canis_familiaris
ENSCPBG00000005677	SRBD1	100	71.342	ENSCAFG00020026284	SRBD1	99	79.812	Canis_lupus_dingo
ENSCPBG00000005677	SRBD1	100	73.817	ENSCHIG00000016535	SRBD1	98	74.447	Capra_hircus
ENSCPBG00000005677	SRBD1	100	73.726	ENSTSYG00000012797	SRBD1	100	73.473	Carlito_syrichta
ENSCPBG00000005677	SRBD1	100	73.865	ENSCPOG00000004773	SRBD1	100	73.541	Cavia_porcellus
ENSCPBG00000005677	SRBD1	100	72.827	ENSCCAG00000025589	SRBD1	100	73.054	Cebus_capucinus
ENSCPBG00000005677	SRBD1	100	73.227	ENSCATG00000039530	SRBD1	100	73.453	Cercocebus_atys
ENSCPBG00000005677	SRBD1	100	74.421	ENSCLAG00000008623	SRBD1	100	73.917	Chinchilla_lanigera
ENSCPBG00000005677	SRBD1	100	73.227	ENSCSAG00000013350	SRBD1	100	73.453	Chlorocebus_sabaeus
ENSCPBG00000005677	SRBD1	87	86.275	ENSCHOG00000003805	SRBD1	87	86.275	Choloepus_hoffmanni
ENSCPBG00000005677	SRBD1	80	42.748	ENSCING00000005950	-	99	42.748	Ciona_intestinalis
ENSCPBG00000005677	SRBD1	80	43.001	ENSCSAVG00000000861	-	99	43.001	Ciona_savignyi
ENSCPBG00000005677	SRBD1	99	72.873	ENSCANG00000016307	SRBD1	99	73.100	Colobus_angolensis_palliatus
ENSCPBG00000005677	SRBD1	100	73.220	ENSCGRG00001000513	Srbd1	100	72.060	Cricetulus_griseus_chok1gshd
ENSCPBG00000005677	SRBD1	100	73.220	ENSCGRG00000002283	Srbd1	100	72.060	Cricetulus_griseus_crigri
ENSCPBG00000005677	SRBD1	97	52.495	ENSCSEG00000000856	si:ch211-117n7.8	84	57.344	Cynoglossus_semilaevis
ENSCPBG00000005677	SRBD1	89	57.159	ENSCVAG00000020212	si:ch211-117n7.8	89	58.491	Cyprinodon_variegatus
ENSCPBG00000005677	SRBD1	100	74.026	ENSDNOG00000018686	SRBD1	100	74.026	Dasypus_novemcinctus
ENSCPBG00000005677	SRBD1	100	71.960	ENSDORG00000010468	Srbd1	100	71.759	Dipodomys_ordii
ENSCPBG00000005677	SRBD1	80	35.980	FBgn0051156	CG31156	79	36.104	Drosophila_melanogaster
ENSCPBG00000005677	SRBD1	89	75.492	ENSETEG00000000739	SRBD1	90	75.492	Echinops_telfairi
ENSCPBG00000005677	SRBD1	74	49.319	ENSEBUG00000008902	si:ch211-117n7.8	96	49.319	Eptatretus_burgeri
ENSCPBG00000005677	SRBD1	100	72.056	ENSEASG00005003132	SRBD1	98	82.390	Equus_asinus_asinus
ENSCPBG00000005677	SRBD1	100	74.750	ENSECAG00000013865	SRBD1	98	74.975	Equus_caballus
ENSCPBG00000005677	SRBD1	100	54.190	ENSELUG00000012592	si:ch211-117n7.8	80	61.302	Esox_lucius
ENSCPBG00000005677	SRBD1	100	73.922	ENSFCAG00000005101	SRBD1	100	74.148	Felis_catus
ENSCPBG00000005677	SRBD1	100	79.391	ENSFALG00000012966	SRBD1	100	79.594	Ficedula_albicollis
ENSCPBG00000005677	SRBD1	98	73.367	ENSFDAG00000016670	SRBD1	97	74.027	Fukomys_damarensis
ENSCPBG00000005677	SRBD1	99	51.764	ENSFHEG00000019480	si:ch211-117n7.8	94	54.076	Fundulus_heteroclitus
ENSCPBG00000005677	SRBD1	51	54.402	ENSGMOG00000018010	-	100	54.402	Gadus_morhua
ENSCPBG00000005677	SRBD1	100	80.386	ENSGALG00000009990	SRBD1	100	80.386	Gallus_gallus
ENSCPBG00000005677	SRBD1	100	51.711	ENSGAFG00000019664	si:ch211-117n7.8	97	52.266	Gambusia_affinis
ENSCPBG00000005677	SRBD1	63	61.342	ENSGACG00000010794	si:ch211-117n7.8	100	61.014	Gasterosteus_aculeatus
ENSCPBG00000005677	SRBD1	96	91.753	ENSGAGG00000006166	SRBD1	100	97.959	Gopherus_agassizii
ENSCPBG00000005677	SRBD1	97	74.638	ENSGGOG00000005910	SRBD1	98	75.000	Gorilla_gorilla
ENSCPBG00000005677	SRBD1	97	47.862	ENSHBUG00000013207	si:ch211-117n7.8	85	51.562	Haplochromis_burtoni
ENSCPBG00000005677	SRBD1	99	73.131	ENSHGLG00000018153	-	99	72.883	Heterocephalus_glaber_female
ENSCPBG00000005677	SRBD1	99	73.085	ENSHGLG00100015183	-	99	72.782	Heterocephalus_glaber_male
ENSCPBG00000005677	SRBD1	86	61.720	ENSIPUG00000009661	srbd1	85	61.013	Ictalurus_punctatus
ENSCPBG00000005677	SRBD1	100	74.223	ENSSTOG00000005898	SRBD1	100	73.821	Ictidomys_tridecemlineatus
ENSCPBG00000005677	SRBD1	100	69.591	ENSJJAG00000022244	Srbd1	100	68.924	Jaculus_jaculus
ENSCPBG00000005677	SRBD1	98	53.247	ENSKMAG00000003473	si:ch211-117n7.8	83	57.615	Kryptolebias_marmoratus
ENSCPBG00000005677	SRBD1	98	53.134	ENSLBEG00000027518	si:ch211-117n7.8	96	53.211	Labrus_bergylta
ENSCPBG00000005677	SRBD1	86	74.763	ENSLACG00000009790	SRBD1	99	74.763	Latimeria_chalumnae
ENSCPBG00000005677	SRBD1	95	62.131	ENSLOCG00000016360	si:ch211-117n7.8	95	61.651	Lepisosteus_oculatus
ENSCPBG00000005677	SRBD1	100	73.227	ENSMFAG00000042026	SRBD1	100	73.453	Macaca_fascicularis
ENSCPBG00000005677	SRBD1	100	73.227	ENSMMUG00000003490	SRBD1	100	73.453	Macaca_mulatta
ENSCPBG00000005677	SRBD1	100	70.829	ENSMNEG00000034701	SRBD1	100	71.058	Macaca_nemestrina
ENSCPBG00000005677	SRBD1	100	73.127	ENSMLEG00000000745	SRBD1	100	73.353	Mandrillus_leucophaeus
ENSCPBG00000005677	SRBD1	97	52.108	ENSMAMG00000021921	si:ch211-117n7.8	94	53.229	Mastacembelus_armatus
ENSCPBG00000005677	SRBD1	97	52.663	ENSMZEG00005027369	si:ch211-117n7.8	82	58.588	Maylandia_zebra
ENSCPBG00000005677	SRBD1	81	81.602	ENSMGAG00000010273	SRBD1	99	81.602	Meleagris_gallopavo
ENSCPBG00000005677	SRBD1	80	78.325	ENSMAUG00000013916	Srbd1	99	75.474	Mesocricetus_auratus
ENSCPBG00000005677	SRBD1	100	73.394	ENSMICG00000007835	SRBD1	100	73.621	Microcebus_murinus
ENSCPBG00000005677	SRBD1	100	72.161	ENSMOCG00000018716	Srbd1	100	71.386	Microtus_ochrogaster
ENSCPBG00000005677	SRBD1	97	53.211	ENSMMOG00000007507	si:ch211-117n7.8	89	56.816	Mola_mola
ENSCPBG00000005677	SRBD1	99	52.344	ENSMALG00000001562	si:ch211-117n7.8	94	54.592	Monopterus_albus
ENSCPBG00000005677	SRBD1	96	73.186	MGP_CAROLIEiJ_G0021934	Srbd1	99	77.170	Mus_caroli
ENSCPBG00000005677	SRBD1	99	71.733	ENSMUSG00000024135	Srbd1	95	80.247	Mus_musculus
ENSCPBG00000005677	SRBD1	100	70.170	MGP_PahariEiJ_G0020924	Srbd1	96	70.917	Mus_pahari
ENSCPBG00000005677	SRBD1	100	71.573	MGP_SPRETEiJ_G0022850	Srbd1	96	72.603	Mus_spretus
ENSCPBG00000005677	SRBD1	100	72.791	ENSMLUG00000007039	SRBD1	100	73.019	Myotis_lucifugus
ENSCPBG00000005677	SRBD1	100	70.674	ENSNGAG00000011893	Srbd1	100	70.537	Nannospalax_galili
ENSCPBG00000005677	SRBD1	97	52.610	ENSNBRG00000012873	si:ch211-117n7.8	85	57.569	Neolamprologus_brichardi
ENSCPBG00000005677	SRBD1	100	73.494	ENSNLEG00000016877	SRBD1	100	73.721	Nomascus_leucogenys
ENSCPBG00000005677	SRBD1	100	72.431	ENSODEG00000012095	SRBD1	100	72.487	Octodon_degus
ENSCPBG00000005677	SRBD1	97	52.404	ENSONIG00000000945	si:ch211-117n7.8	99	58.865	Oreochromis_niloticus
ENSCPBG00000005677	SRBD1	100	73.420	ENSOCUG00000015385	SRBD1	100	73.948	Oryctolagus_cuniculus
ENSCPBG00000005677	SRBD1	97	50.400	ENSORLG00000004427	si:ch211-117n7.8	82	55.124	Oryzias_latipes
ENSCPBG00000005677	SRBD1	98	52.522	ENSORLG00020012792	si:ch211-117n7.8	94	53.080	Oryzias_latipes_hni
ENSCPBG00000005677	SRBD1	98	52.178	ENSORLG00015018598	si:ch211-117n7.8	82	57.833	Oryzias_latipes_hsok
ENSCPBG00000005677	SRBD1	99	51.717	ENSOMEG00000012229	si:ch211-117n7.8	82	57.701	Oryzias_melastigma
ENSCPBG00000005677	SRBD1	100	69.447	ENSOGAG00000001076	SRBD1	100	69.980	Otolemur_garnettii
ENSCPBG00000005677	SRBD1	100	69.747	ENSOARG00000005958	SRBD1	100	70.360	Ovis_aries
ENSCPBG00000005677	SRBD1	100	72.846	ENSPPAG00000038442	SRBD1	100	73.500	Pan_paniscus
ENSCPBG00000005677	SRBD1	100	73.821	ENSPPRG00000003449	SRBD1	100	74.048	Panthera_pardus
ENSCPBG00000005677	SRBD1	100	73.922	ENSPTIG00000012495	SRBD1	100	74.148	Panthera_tigris_altaica
ENSCPBG00000005677	SRBD1	100	72.846	ENSPTRG00000011889	SRBD1	100	73.500	Pan_troglodytes
ENSCPBG00000005677	SRBD1	100	73.127	ENSPANG00000008063	SRBD1	100	73.353	Papio_anubis
ENSCPBG00000005677	SRBD1	87	59.954	ENSPKIG00000021973	si:ch211-117n7.8	89	59.543	Paramormyrops_kingsleyae
ENSCPBG00000005677	SRBD1	100	92.988	ENSPSIG00000008992	SRBD1	100	92.988	Pelodiscus_sinensis
ENSCPBG00000005677	SRBD1	97	51.735	ENSPMGG00000013348	si:ch211-117n7.8	86	56.890	Periophthalmus_magnuspinnatus
ENSCPBG00000005677	SRBD1	100	70.334	ENSPEMG00000020684	Srbd1	100	69.480	Peromyscus_maniculatus_bairdii
ENSCPBG00000005677	SRBD1	100	52.626	ENSPFOG00000010650	si:ch211-117n7.8	86	56.900	Poecilia_formosa
ENSCPBG00000005677	SRBD1	100	52.335	ENSPLAG00000002141	si:ch211-117n7.8	83	58.442	Poecilia_latipinna
ENSCPBG00000005677	SRBD1	100	52.724	ENSPMEG00000018537	si:ch211-117n7.8	94	53.894	Poecilia_mexicana
ENSCPBG00000005677	SRBD1	97	53.150	ENSPREG00000003258	si:ch211-117n7.8	94	53.935	Poecilia_reticulata
ENSCPBG00000005677	SRBD1	100	67.045	ENSPPYG00000012444	SRBD1	99	67.358	Pongo_abelii
ENSCPBG00000005677	SRBD1	77	73.838	ENSPCAG00000005629	SRBD1	80	73.838	Procavia_capensis
ENSCPBG00000005677	SRBD1	100	61.986	ENSPCOG00000017669	SRBD1	100	62.224	Propithecus_coquereli
ENSCPBG00000005677	SRBD1	100	65.200	ENSPVAG00000001782	SRBD1	100	65.435	Pteropus_vampyrus
ENSCPBG00000005677	SRBD1	84	56.019	ENSPNYG00000000508	si:ch211-117n7.8	85	56.019	Pundamilia_nyererei
ENSCPBG00000005677	SRBD1	97	58.455	ENSPNAG00000013492	SRBD1	85	62.073	Pygocentrus_nattereri
ENSCPBG00000005677	SRBD1	97	71.979	ENSRNOG00000014720	Srbd1	95	71.593	Rattus_norvegicus
ENSCPBG00000005677	SRBD1	99	72.873	ENSRBIG00000033486	SRBD1	99	73.100	Rhinopithecus_bieti
ENSCPBG00000005677	SRBD1	99	72.873	ENSRROG00000041599	SRBD1	99	73.100	Rhinopithecus_roxellana
ENSCPBG00000005677	SRBD1	100	72.500	ENSSBOG00000024982	SRBD1	100	72.727	Saimiri_boliviensis_boliviensis
ENSCPBG00000005677	SRBD1	96	56.373	ENSSFOG00015001128	si:ch211-117n7.8	90	61.447	Scleropages_formosus
ENSCPBG00000005677	SRBD1	98	52.559	ENSSMAG00000018256	si:ch211-117n7.8	82	57.851	Scophthalmus_maximus
ENSCPBG00000005677	SRBD1	84	58.205	ENSSLDG00000023189	si:ch211-117n7.8	83	58.205	Seriola_lalandi_dorsalis
ENSCPBG00000005677	SRBD1	100	66.334	ENSSARG00000009740	SRBD1	100	65.729	Sorex_araneus
ENSCPBG00000005677	SRBD1	96	80.632	ENSSPUG00000010475	SRBD1	99	80.696	Sphenodon_punctatus
ENSCPBG00000005677	SRBD1	95	53.361	ENSSPAG00000008092	-	84	56.789	Stegastes_partitus
ENSCPBG00000005677	SRBD1	100	75.226	ENSSSCG00000008445	SRBD1	98	74.749	Sus_scrofa
ENSCPBG00000005677	SRBD1	84	84.578	ENSTGUG00000003878	SRBD1	100	84.578	Taeniopygia_guttata
ENSCPBG00000005677	SRBD1	99	51.576	ENSTRUG00000007080	si:ch211-117n7.8	95	57.503	Takifugu_rubripes
ENSCPBG00000005677	SRBD1	98	52.778	ENSTNIG00000007464	si:ch211-117n7.8	96	52.589	Tetraodon_nigroviridis
ENSCPBG00000005677	SRBD1	76	95.745	ENSTBEG00000004556	SRBD1	76	95.745	Tupaia_belangeri
ENSCPBG00000005677	SRBD1	94	76.959	ENSTTRG00000011871	SRBD1	94	76.959	Tursiops_truncatus
ENSCPBG00000005677	SRBD1	100	74.168	ENSUAMG00000008126	SRBD1	97	79.422	Ursus_americanus
ENSCPBG00000005677	SRBD1	100	74.067	ENSUMAG00000012902	SRBD1	98	74.067	Ursus_maritimus
ENSCPBG00000005677	SRBD1	91	77.704	ENSVPAG00000006825	SRBD1	99	77.704	Vicugna_pacos
ENSCPBG00000005677	SRBD1	100	74.773	ENSVVUG00000005389	SRBD1	99	79.747	Vulpes_vulpes
ENSCPBG00000005677	SRBD1	100	54.440	ENSXETG00000002760	srbd1	95	55.612	Xenopus_tropicalis
ENSCPBG00000005677	SRBD1	100	52.330	ENSXMAG00000016861	si:ch211-117n7.8	97	52.048	Xiphophorus_maculatus