EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000005866 (Gene tree)
Gene ID: 101944398
Gene Symbol: RAB20
Alias: FLJ20429
Full Name: RAB20%2C member RAS oncogene family
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 44627 bases
Position: chr8:51075479-51120105
Accession: 18260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000007434	MMR_HSR1	PF01926.23	5.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000008976	RAB20-201	1111	-	ENSCPBP00000007434	233 (aa)	XP_005303042	UPI000388BE42

Gene Model

Click here to download ENSCPBG00000005866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000005866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000005866	RAB20	65	34.568	ENSCPBG00000011236	-	73	34.568
ENSCPBG00000005866	RAB20	98	30.508	ENSCPBG00000012712	RAB5B	90	30.508
ENSCPBG00000005866	RAB20	67	30.488	ENSCPBG00000012691	RAB2B	76	30.488
ENSCPBG00000005866	RAB20	63	32.237	ENSCPBG00000023927	RAB22A	78	32.237
ENSCPBG00000005866	RAB20	53	34.109	ENSCPBG00000022446	RAB1B	64	34.109
ENSCPBG00000005866	RAB20	60	31.034	ENSCPBG00000000041	RAB6A	69	31.034
ENSCPBG00000005866	RAB20	60	32.414	ENSCPBG00000014340	RAB41	68	32.414
ENSCPBG00000005866	RAB20	67	30.488	ENSCPBG00000023254	RAB2A	77	30.488
ENSCPBG00000005866	RAB20	53	35.659	ENSCPBG00000006855	RAB30	64	35.659
ENSCPBG00000005866	RAB20	59	31.544	ENSCPBG00000020275	RAB34	57	31.544
ENSCPBG00000005866	RAB20	50	38.525	ENSCPBG00000022559	RAB5A	57	38.525
ENSCPBG00000005866	RAB20	50	30.252	ENSCPBG00000014937	ARL8B	64	30.252
ENSCPBG00000005866	RAB20	97	30.252	ENSCPBG00000025817	RAB25	93	30.252
ENSCPBG00000005866	RAB20	74	30.052	ENSCPBG00000021406	RAB6B	92	30.052
ENSCPBG00000005866	RAB20	71	30.857	ENSCPBG00000014614	RAB11A	81	30.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000005866	RAB20	99	63.922	ENSATEG00000011117	rab20	99	63.922	Anabas_testudineus
ENSCPBG00000005866	RAB20	99	84.483	ENSAPLG00000011744	RAB20	99	84.483	Anas_platyrhynchos
ENSCPBG00000005866	RAB20	99	79.310	ENSACAG00000014045	RAB20	99	79.310	Anolis_carolinensis
ENSCPBG00000005866	RAB20	99	61.066	ENSAMXG00000003504	rab20	99	61.475	Astyanax_mexicanus
ENSCPBG00000005866	RAB20	99	67.949	ENSCSEG00000011160	rab20	99	67.949	Cynoglossus_semilaevis
ENSCPBG00000005866	RAB20	99	68.644	ENSDARG00000005049	rab20	97	68.644	Danio_rerio
ENSCPBG00000005866	RAB20	99	61.569	ENSELUG00000004092	rab20	97	61.569	Esox_lucius
ENSCPBG00000005866	RAB20	99	82.759	ENSFALG00000004409	RAB20	99	82.759	Ficedula_albicollis
ENSCPBG00000005866	RAB20	99	65.678	ENSGACG00000003527	rab20	99	65.678	Gasterosteus_aculeatus
ENSCPBG00000005866	RAB20	99	61.753	ENSHCOG00000013468	rab20	97	61.753	Hippocampus_comes
ENSCPBG00000005866	RAB20	99	68.085	ENSIPUG00000000432	RAB20	96	68.936	Ictalurus_punctatus
ENSCPBG00000005866	RAB20	99	68.085	ENSIPUG00000018288	RAB20	96	68.936	Ictalurus_punctatus
ENSCPBG00000005866	RAB20	99	74.459	ENSLACG00000011001	RAB20	98	74.459	Latimeria_chalumnae
ENSCPBG00000005866	RAB20	99	64.567	ENSMAMG00000015214	rab20	97	64.567	Mastacembelus_armatus
ENSCPBG00000005866	RAB20	99	66.949	ENSMMOG00000020022	rab20	99	66.949	Mola_mola
ENSCPBG00000005866	RAB20	99	75.758	ENSMEUG00000009442	RAB20	99	75.758	Notamacropus_eugenii
ENSCPBG00000005866	RAB20	86	47.143	ENSPMAG00000004439	rab20	98	47.143	Petromyzon_marinus
ENSCPBG00000005866	RAB20	99	63.866	ENSPNAG00000008867	rab20	99	65.126	Pygocentrus_nattereri
ENSCPBG00000005866	RAB20	99	63.386	ENSSMAG00000018818	rab20	99	63.386	Scophthalmus_maximus
ENSCPBG00000005866	RAB20	99	64.706	ENSSDUG00000005148	rab20	97	64.706	Seriola_dumerili
ENSCPBG00000005866	RAB20	99	83.621	ENSTGUG00000008797	RAB20	99	83.621	Taeniopygia_guttata
ENSCPBG00000005866	RAB20	99	59.216	ENSTRUG00000022951	rab20	97	59.216	Takifugu_rubripes
ENSCPBG00000005866	RAB20	94	65.611	ENSTNIG00000013920	rab20	99	64.957	Tetraodon_nigroviridis