EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000006045 (Gene tree)
Gene ID: 101942330
Gene Symbol: SLTM
Alias: FLJ13213|Met
Full Name: SAFB like transcription modulator
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 45618 bases
Position: chrKK088223.1:2619189-2664806
Accession: 20709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000014212	RRM_5	PF13893.6	3.3e-08	1	1
ENSCPBP00000014206	RRM_5	PF13893.6	3.4e-08	1	1
ENSCPBP00000014329	RRM_5	PF13893.6	3.6e-08	1	1
ENSCPBP00000014255	RRM_5	PF13893.6	3.7e-08	1	1
ENSCPBP00000013576	RRM_5	PF13893.6	3.7e-08	1	1
ENSCPBP00000014220	RRM_5	PF13893.6	3.8e-08	1	1
ENSCPBP00000014247	RRM_5	PF13893.6	4e-08	1	1
ENSCPBP00000013570	RRM_5	PF13893.6	4.1e-08	1	1
ENSCPBP00000013566	RRM_5	PF13893.6	4.2e-08	1	1
ENSCPBP00000014226	RRM_5	PF13893.6	4.4e-08	1	1
ENSCPBP00000014220	RRM_1	PF00076.22	2e-11	1	1
ENSCPBP00000014329	RRM_1	PF00076.22	2e-11	1	1
ENSCPBP00000014206	RRM_1	PF00076.22	2e-11	1	1
ENSCPBP00000014212	RRM_1	PF00076.22	2.1e-11	1	1
ENSCPBP00000013576	RRM_1	PF00076.22	2.1e-11	1	1
ENSCPBP00000013570	RRM_1	PF00076.22	2.2e-11	1	1
ENSCPBP00000014255	RRM_1	PF00076.22	2.2e-11	1	1
ENSCPBP00000014247	RRM_1	PF00076.22	2.2e-11	1	1
ENSCPBP00000013566	RRM_1	PF00076.22	2.4e-11	1	1
ENSCPBP00000014226	RRM_1	PF00076.22	2.5e-11	1	1
ENSCPBP00000013576	SAP	PF02037.27	5.1e-10	1	1
ENSCPBP00000014247	SAP	PF02037.27	5.5e-10	1	1
ENSCPBP00000013570	SAP	PF02037.27	5.8e-10	1	1
ENSCPBP00000014212	SAP	PF02037.27	5.9e-10	1	1
ENSCPBP00000013566	SAP	PF02037.27	6e-10	1	1
ENSCPBP00000014206	SAP	PF02037.27	6.3e-10	1	1
ENSCPBP00000014255	SAP	PF02037.27	6.4e-10	1	1
ENSCPBP00000014226	SAP	PF02037.27	6.4e-10	1	1
ENSCPBP00000014329	SAP	PF02037.27	7.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000016857	SLTM-204	2952	-	ENSCPBP00000014206	983 (aa)	-	-
ENSCPBT00000016087	SLTM-201	3752	XM_005309384	ENSCPBP00000013566	1059 (aa)	XP_005309441	UPI000388B919
ENSCPBT00000016100	SLTM-203	3518	-	ENSCPBP00000013576	981 (aa)	-	-
ENSCPBT00000016884	SLTM-207	3264	-	ENSCPBP00000014226	1087 (aa)	-	-
ENSCPBT00000016092	SLTM-202	3704	-	ENSCPBP00000013570	1043 (aa)	-	-
ENSCPBT00000017022	SLTM-210	2778	-	ENSCPBP00000014329	925 (aa)	-	-
ENSCPBT00000016924	SLTM-209	2970	-	ENSCPBP00000014255	989 (aa)	-	-
ENSCPBT00000016878	SLTM-206	2919	-	ENSCPBP00000014220	972 (aa)	-	-
ENSCPBT00000016868	SLTM-205	2871	-	ENSCPBP00000014212	956 (aa)	-	-
ENSCPBT00000016916	SLTM-208	3042	-	ENSCPBP00000014247	1013 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000006045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000006045's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000006045	SLTM	74	34.737	ENSCPBG00000010928	-	64	39.832

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000006045	SLTM	98	82.503	ENSG00000137776	SLTM	92	91.954	Homo_sapiens
ENSCPBG00000006045	SLTM	98	54.128	ENSAPOG00000012346	sltm	99	52.059	Acanthochromis_polyacanthus
ENSCPBG00000006045	SLTM	99	81.339	ENSAMEG00000004537	SLTM	100	80.933	Ailuropoda_melanoleuca
ENSCPBG00000006045	SLTM	99	51.085	ENSACIG00000001971	sltm	100	50.488	Amphilophus_citrinellus
ENSCPBG00000006045	SLTM	98	53.934	ENSAOCG00000002747	sltm	99	52.358	Amphiprion_ocellaris
ENSCPBG00000006045	SLTM	98	54.224	ENSAPEG00000012366	sltm	99	52.505	Amphiprion_percula
ENSCPBG00000006045	SLTM	98	54.989	ENSATEG00000003763	sltm	94	60.227	Anabas_testudineus
ENSCPBG00000006045	SLTM	99	90.520	ENSAPLG00000013025	SLTM	59	89.721	Anas_platyrhynchos
ENSCPBG00000006045	SLTM	98	80.334	ENSACAG00000015120	SLTM	98	78.328	Anolis_carolinensis
ENSCPBG00000006045	SLTM	98	90.909	ENSANAG00000037031	SLTM	99	80.704	Aotus_nancymaae
ENSCPBG00000006045	SLTM	99	50.398	ENSACLG00000002523	sltm	99	52.065	Astatotilapia_calliptera
ENSCPBG00000006045	SLTM	99	51.509	ENSAMXG00000012409	sltm	96	53.475	Astyanax_mexicanus
ENSCPBG00000006045	SLTM	100	80.187	ENSBTAG00000011319	SLTM	98	80.912	Bos_taurus
ENSCPBG00000006045	SLTM	98	90.909	ENSCJAG00000020395	SLTM	99	80.194	Callithrix_jacchus
ENSCPBG00000006045	SLTM	98	83.942	ENSCAFG00000016586	SLTM	98	80.556	Canis_familiaris
ENSCPBG00000006045	SLTM	98	83.840	ENSCAFG00020011253	SLTM	98	89.247	Canis_lupus_dingo
ENSCPBG00000006045	SLTM	98	82.646	ENSCHIG00000008780	SLTM	99	82.403	Capra_hircus
ENSCPBG00000006045	SLTM	99	80.203	ENSTSYG00000013581	SLTM	95	82.382	Carlito_syrichta
ENSCPBG00000006045	SLTM	96	65.935	ENSCAPG00000013326	SLTM	99	65.252	Cavia_aperea
ENSCPBG00000006045	SLTM	99	70.876	ENSCPOG00000026109	SLTM	98	71.553	Cavia_porcellus
ENSCPBG00000006045	SLTM	98	92.045	ENSCCAG00000022982	SLTM	99	80.437	Cebus_capucinus
ENSCPBG00000006045	SLTM	98	82.503	ENSCATG00000030254	SLTM	99	81.166	Cercocebus_atys
ENSCPBG00000006045	SLTM	95	77.134	ENSCLAG00000007160	SLTM	98	79.584	Chinchilla_lanigera
ENSCPBG00000006045	SLTM	98	82.625	ENSCSAG00000012004	SLTM	99	81.288	Chlorocebus_sabaeus
ENSCPBG00000006045	SLTM	89	78.318	ENSCHOG00000001125	SLTM	97	76.610	Choloepus_hoffmanni
ENSCPBG00000006045	SLTM	99	80.203	ENSCANG00000043731	SLTM	100	81.045	Colobus_angolensis_palliatus
ENSCPBG00000006045	SLTM	98	80.825	ENSCGRG00001022009	Sltm	99	79.951	Cricetulus_griseus_chok1gshd
ENSCPBG00000006045	SLTM	99	78.782	ENSCGRG00000014806	Sltm	100	80.049	Cricetulus_griseus_crigri
ENSCPBG00000006045	SLTM	93	53.500	ENSCSEG00000001618	sltm	58	46.569	Cynoglossus_semilaevis
ENSCPBG00000006045	SLTM	99	55.080	ENSDARG00000052728	sltm	98	64.444	Danio_rerio
ENSCPBG00000006045	SLTM	98	90.110	ENSDNOG00000002975	SLTM	98	80.273	Dasypus_novemcinctus
ENSCPBG00000006045	SLTM	74	84.424	ENSDORG00000007463	Sltm	89	84.270	Dipodomys_ordii
ENSCPBG00000006045	SLTM	58	78.646	ENSETEG00000008003	SLTM	83	76.042	Echinops_telfairi
ENSCPBG00000006045	SLTM	97	85.714	ENSEASG00005006792	SLTM	99	82.017	Equus_asinus_asinus
ENSCPBG00000006045	SLTM	97	85.714	ENSECAG00000011267	SLTM	100	82.017	Equus_caballus
ENSCPBG00000006045	SLTM	84	86.008	ENSEEUG00000000580	SLTM	91	86.008	Erinaceus_europaeus
ENSCPBG00000006045	SLTM	95	65.979	ENSELUG00000013388	sltm	86	82.812	Esox_lucius
ENSCPBG00000006045	SLTM	98	83.718	ENSFCAG00000004826	SLTM	99	82.625	Felis_catus
ENSCPBG00000006045	SLTM	99	89.796	ENSFALG00000012285	SLTM	58	89.180	Ficedula_albicollis
ENSCPBG00000006045	SLTM	99	79.188	ENSFDAG00000018075	SLTM	100	79.594	Fukomys_damarensis
ENSCPBG00000006045	SLTM	85	48.037	ENSFHEG00000014764	sltm	99	47.349	Fundulus_heteroclitus
ENSCPBG00000006045	SLTM	60	70.455	ENSGMOG00000015455	sltm	70	70.213	Gadus_morhua
ENSCPBG00000006045	SLTM	98	54.850	ENSGACG00000015814	sltm	99	51.823	Gasterosteus_aculeatus
ENSCPBG00000006045	SLTM	98	100.000	ENSGAGG00000021279	SLTM	100	98.459	Gopherus_agassizii
ENSCPBG00000006045	SLTM	98	82.503	ENSGGOG00000015866	SLTM	99	81.166	Gorilla_gorilla
ENSCPBG00000006045	SLTM	99	50.298	ENSHBUG00000012461	sltm	99	51.969	Haplochromis_burtoni
ENSCPBG00000006045	SLTM	98	67.769	ENSHGLG00000015426	-	61	71.381	Heterocephalus_glaber_female
ENSCPBG00000006045	SLTM	99	80.704	ENSHGLG00000018512	-	99	80.340	Heterocephalus_glaber_female
ENSCPBG00000006045	SLTM	99	76.764	ENSHGLG00100002674	-	61	75.205	Heterocephalus_glaber_male
ENSCPBG00000006045	SLTM	98	74.138	ENSHGLG00100002576	-	61	65.416	Heterocephalus_glaber_male
ENSCPBG00000006045	SLTM	98	70.257	ENSHGLG00100001757	-	61	71.048	Heterocephalus_glaber_male
ENSCPBG00000006045	SLTM	99	45.258	ENSHCOG00000003395	sltm	63	40.351	Hippocampus_comes
ENSCPBG00000006045	SLTM	99	54.391	ENSIPUG00000023201	sltm	91	56.192	Ictalurus_punctatus
ENSCPBG00000006045	SLTM	99	80.305	ENSSTOG00000000584	SLTM	100	81.774	Ictidomys_tridecemlineatus
ENSCPBG00000006045	SLTM	98	83.158	ENSJJAG00000006970	Sltm	90	86.667	Jaculus_jaculus
ENSCPBG00000006045	SLTM	97	61.250	ENSKMAG00000007570	sltm	61	44.923	Kryptolebias_marmoratus
ENSCPBG00000006045	SLTM	99	49.277	ENSLBEG00000025472	sltm	60	49.266	Labrus_bergylta
ENSCPBG00000006045	SLTM	98	75.000	ENSLACG00000005234	SLTM	89	78.652	Latimeria_chalumnae
ENSCPBG00000006045	SLTM	98	63.202	ENSLOCG00000013629	sltm	92	59.770	Lepisosteus_oculatus
ENSCPBG00000006045	SLTM	98	88.636	ENSLAFG00000017922	SLTM	99	80.059	Loxodonta_africana
ENSCPBG00000006045	SLTM	98	82.503	ENSMFAG00000033354	SLTM	99	81.166	Macaca_fascicularis
ENSCPBG00000006045	SLTM	94	89.888	ENSMMUG00000022200	SLTM	92	91.954	Macaca_mulatta
ENSCPBG00000006045	SLTM	98	82.503	ENSMNEG00000025105	SLTM	99	81.166	Macaca_nemestrina
ENSCPBG00000006045	SLTM	98	82.382	ENSMLEG00000043355	SLTM	99	81.045	Mandrillus_leucophaeus
ENSCPBG00000006045	SLTM	98	56.265	ENSMAMG00000021391	sltm	99	53.156	Mastacembelus_armatus
ENSCPBG00000006045	SLTM	99	50.398	ENSMZEG00005013839	sltm	99	52.065	Maylandia_zebra
ENSCPBG00000006045	SLTM	95	91.487	ENSMGAG00000005313	SLTM	59	82.313	Meleagris_gallopavo
ENSCPBG00000006045	SLTM	98	79.825	ENSMAUG00000014391	Sltm	98	86.667	Mesocricetus_auratus
ENSCPBG00000006045	SLTM	98	82.503	ENSMICG00000013069	SLTM	99	82.503	Microcebus_murinus
ENSCPBG00000006045	SLTM	98	81.045	ENSMOCG00000012419	Sltm	99	80.170	Microtus_ochrogaster
ENSCPBG00000006045	SLTM	99	48.328	ENSMMOG00000016470	sltm	57	44.733	Mola_mola
ENSCPBG00000006045	SLTM	98	88.266	ENSMODG00000008794	-	98	81.605	Monodelphis_domestica
ENSCPBG00000006045	SLTM	98	53.998	ENSMALG00000021474	sltm	99	52.441	Monopterus_albus
ENSCPBG00000006045	SLTM	58	76.329	MGP_CAROLIEiJ_G0032404	Sltm	99	78.102	Mus_caroli
ENSCPBG00000006045	SLTM	54	89.773	ENSMUSG00000032212	Sltm	98	78.589	Mus_musculus
ENSCPBG00000006045	SLTM	58	76.490	MGP_PahariEiJ_G0015268	Sltm	99	78.467	Mus_pahari
ENSCPBG00000006045	SLTM	58	76.252	MGP_SPRETEiJ_G0033542	Sltm	98	78.224	Mus_spretus
ENSCPBG00000006045	SLTM	100	80.742	ENSMPUG00000004229	SLTM	94	82.382	Mustela_putorius_furo
ENSCPBG00000006045	SLTM	99	80.081	ENSMLUG00000000742	SLTM	100	80.384	Myotis_lucifugus
ENSCPBG00000006045	SLTM	99	81.873	ENSNGAG00000012328	Sltm	99	81.242	Nannospalax_galili
ENSCPBG00000006045	SLTM	99	51.068	ENSNBRG00000010183	sltm	100	51.408	Neolamprologus_brichardi
ENSCPBG00000006045	SLTM	98	82.260	ENSNLEG00000011440	SLTM	98	80.923	Nomascus_leucogenys
ENSCPBG00000006045	SLTM	96	76.316	ENSMEUG00000015230	SLTM	59	69.821	Notamacropus_eugenii
ENSCPBG00000006045	SLTM	99	77.140	ENSODEG00000017077	SLTM	99	77.800	Octodon_degus
ENSCPBG00000006045	SLTM	98	54.611	ENSONIG00000005838	sltm	100	50.615	Oreochromis_niloticus
ENSCPBG00000006045	SLTM	98	76.812	ENSOCUG00000003327	SLTM	100	76.812	Oryctolagus_cuniculus
ENSCPBG00000006045	SLTM	91	58.427	ENSORLG00000008161	sltm	99	47.157	Oryzias_latipes
ENSCPBG00000006045	SLTM	99	46.627	ENSORLG00020008903	sltm	99	47.374	Oryzias_latipes_hni
ENSCPBG00000006045	SLTM	91	58.427	ENSORLG00015007103	sltm	99	47.209	Oryzias_latipes_hsok
ENSCPBG00000006045	SLTM	91	46.590	ENSOMEG00000002041	sltm	98	48.852	Oryzias_melastigma
ENSCPBG00000006045	SLTM	98	92.045	ENSOGAG00000011297	SLTM	99	81.774	Otolemur_garnettii
ENSCPBG00000006045	SLTM	99	82.767	ENSOARG00000020844	SLTM	99	80.897	Ovis_aries
ENSCPBG00000006045	SLTM	98	81.121	ENSPPAG00000029308	SLTM	99	81.121	Pan_paniscus
ENSCPBG00000006045	SLTM	98	83.354	ENSPPRG00000012400	SLTM	99	82.260	Panthera_pardus
ENSCPBG00000006045	SLTM	99	80.996	ENSPTIG00000021933	SLTM	95	82.117	Panthera_tigris_altaica
ENSCPBG00000006045	SLTM	98	82.503	ENSPTRG00000007121	SLTM	99	81.166	Pan_troglodytes
ENSCPBG00000006045	SLTM	98	82.503	ENSPANG00000017193	SLTM	99	81.166	Papio_anubis
ENSCPBG00000006045	SLTM	92	82.500	ENSPKIG00000022760	sltm	99	82.500	Paramormyrops_kingsleyae
ENSCPBG00000006045	SLTM	98	94.634	ENSPSIG00000005489	SLTM	97	86.627	Pelodiscus_sinensis
ENSCPBG00000006045	SLTM	53	46.893	ENSPMGG00000006037	sltm	50	71.930	Periophthalmus_magnuspinnatus
ENSCPBG00000006045	SLTM	98	88.636	ENSPEMG00000013263	Sltm	98	78.634	Peromyscus_maniculatus_bairdii
ENSCPBG00000006045	SLTM	98	86.858	ENSPCIG00000028356	SLTM	99	88.304	Phascolarctos_cinereus
ENSCPBG00000006045	SLTM	99	46.334	ENSPFOG00000004372	sltm	100	46.706	Poecilia_formosa
ENSCPBG00000006045	SLTM	99	46.214	ENSPLAG00000008000	sltm	100	46.909	Poecilia_latipinna
ENSCPBG00000006045	SLTM	99	46.408	ENSPMEG00000006047	sltm	100	46.640	Poecilia_mexicana
ENSCPBG00000006045	SLTM	99	47.426	ENSPREG00000023236	sltm	100	46.588	Poecilia_reticulata
ENSCPBG00000006045	SLTM	98	80.559	ENSPPYG00000006515	SLTM	99	79.222	Pongo_abelii
ENSCPBG00000006045	SLTM	99	73.479	ENSPCAG00000013482	SLTM	99	72.506	Procavia_capensis
ENSCPBG00000006045	SLTM	98	83.212	ENSPCOG00000010624	SLTM	99	83.212	Propithecus_coquereli
ENSCPBG00000006045	SLTM	98	83.354	ENSPVAG00000015056	SLTM	99	81.896	Pteropus_vampyrus
ENSCPBG00000006045	SLTM	99	50.298	ENSPNYG00000013893	sltm	99	51.969	Pundamilia_nyererei
ENSCPBG00000006045	SLTM	97	66.667	ENSPNAG00000020563	sltm	98	55.777	Pygocentrus_nattereri
ENSCPBG00000006045	SLTM	58	76.006	ENSRNOG00000054446	Sltm	98	78.224	Rattus_norvegicus
ENSCPBG00000006045	SLTM	99	80.508	ENSRBIG00000029226	SLTM	99	81.409	Rhinopithecus_bieti
ENSCPBG00000006045	SLTM	98	82.746	ENSRROG00000045301	SLTM	99	81.409	Rhinopithecus_roxellana
ENSCPBG00000006045	SLTM	98	92.045	ENSSBOG00000018883	SLTM	99	80.559	Saimiri_boliviensis_boliviensis
ENSCPBG00000006045	SLTM	99	82.299	ENSSHAG00000015395	SLTM	99	86.499	Sarcophilus_harrisii
ENSCPBG00000006045	SLTM	98	54.911	ENSSMAG00000000355	sltm	99	50.047	Scophthalmus_maximus
ENSCPBG00000006045	SLTM	98	55.861	ENSSDUG00000018134	sltm	100	51.688	Seriola_dumerili
ENSCPBG00000006045	SLTM	98	55.928	ENSSLDG00000013907	sltm	100	51.544	Seriola_lalandi_dorsalis
ENSCPBG00000006045	SLTM	98	55.046	ENSSPAG00000008130	sltm	99	52.245	Stegastes_partitus
ENSCPBG00000006045	SLTM	98	83.090	ENSSSCG00000004592	SLTM	100	81.288	Sus_scrofa
ENSCPBG00000006045	SLTM	96	89.391	ENSTGUG00000006017	SLTM	57	87.085	Taeniopygia_guttata
ENSCPBG00000006045	SLTM	90	49.767	ENSTRUG00000017767	sltm	82	44.422	Takifugu_rubripes
ENSCPBG00000006045	SLTM	98	48.528	ENSTNIG00000009334	sltm	59	42.373	Tetraodon_nigroviridis
ENSCPBG00000006045	SLTM	92	83.041	ENSTBEG00000000945	SLTM	100	75.736	Tupaia_belangeri
ENSCPBG00000006045	SLTM	99	83.597	ENSTTRG00000005246	SLTM	99	82.868	Tursiops_truncatus
ENSCPBG00000006045	SLTM	87	83.231	ENSUAMG00000025901	SLTM	100	83.107	Ursus_americanus
ENSCPBG00000006045	SLTM	100	80.870	ENSUMAG00000023678	SLTM	100	82.737	Ursus_maritimus
ENSCPBG00000006045	SLTM	58	79.965	ENSVPAG00000008606	SLTM	100	81.774	Vicugna_pacos
ENSCPBG00000006045	SLTM	98	83.840	ENSVVUG00000001450	SLTM	98	81.854	Vulpes_vulpes
ENSCPBG00000006045	SLTM	99	64.322	ENSXETG00000010840	sltm	98	64.311	Xenopus_tropicalis
ENSCPBG00000006045	SLTM	99	46.408	ENSXMAG00000014466	sltm	100	46.857	Xiphophorus_maculatus