EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000006373 (Gene tree)
Gene ID: 101930909
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 42442 bases
Position: chrKK082925.1:7952784-7995225
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000008111	POP1	PF06978.11	5.2e-39	1	2
ENSCPBP00000008111	POP1	PF06978.11	5.2e-39	2	2
ENSCPBP00000008115	POP1	PF06978.11	5.2e-39	1	2
ENSCPBP00000008115	POP1	PF06978.11	5.2e-39	2	2
ENSCPBP00000008111	POPLD	PF08170.12	1.1e-25	1	1
ENSCPBP00000008115	POPLD	PF08170.12	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000009772	POP1-201	3764	-	ENSCPBP00000008111	1003 (aa)	-	UPI000CE65A0E
ENSCPBT00000009777	POP1-202	3764	XM_008168352	ENSCPBP00000008115	1003 (aa)	XP_008166574	UPI000CE65A0E

Gene Model

Click here to download ENSCPBG00000006373's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03008	Ribosome biogenesis in eukaryotes	KEGG
cpic03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000006373's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000006373	POP1	100	65.272	ENSG00000104356	POP1	100	68.280	Homo_sapiens
ENSCPBG00000006373	POP1	100	49.284	ENSAPOG00000008198	pop1	100	49.040	Acanthochromis_polyacanthus
ENSCPBG00000006373	POP1	100	64.327	ENSAMEG00000000556	POP1	100	64.327	Ailuropoda_melanoleuca
ENSCPBG00000006373	POP1	100	49.273	ENSACIG00000004169	POP1	100	49.079	Amphilophus_citrinellus
ENSCPBG00000006373	POP1	100	48.846	ENSAOCG00000010991	pop1	100	48.604	Amphiprion_ocellaris
ENSCPBG00000006373	POP1	91	48.272	ENSAPEG00000007607	pop1	95	49.045	Amphiprion_percula
ENSCPBG00000006373	POP1	100	48.664	ENSATEG00000024814	POP1	100	48.750	Anabas_testudineus
ENSCPBG00000006373	POP1	92	74.786	ENSAPLG00000014418	POP1	99	74.542	Anas_platyrhynchos
ENSCPBG00000006373	POP1	100	63.311	ENSACAG00000016083	POP1	100	63.592	Anolis_carolinensis
ENSCPBG00000006373	POP1	88	70.882	ENSANAG00000026360	POP1	99	70.882	Aotus_nancymaae
ENSCPBG00000006373	POP1	100	50.240	ENSACLG00000010951	pop1	100	50.096	Astatotilapia_calliptera
ENSCPBG00000006373	POP1	100	47.712	ENSAMXG00000014483	POP1	100	46.566	Astyanax_mexicanus
ENSCPBG00000006373	POP1	100	64.447	ENSBTAG00000012596	POP1	100	64.447	Bos_taurus
ENSCPBG00000006373	POP1	100	64.591	ENSCJAG00000015567	POP1	100	64.591	Callithrix_jacchus
ENSCPBG00000006373	POP1	100	65.209	ENSCAFG00000000469	POP1	100	65.209	Canis_familiaris
ENSCPBG00000006373	POP1	100	64.545	ENSCAFG00020026765	POP1	100	64.545	Canis_lupus_dingo
ENSCPBG00000006373	POP1	100	64.390	ENSCHIG00000017066	POP1	100	64.481	Capra_hircus
ENSCPBG00000006373	POP1	100	63.698	ENSTSYG00000003097	POP1	100	63.504	Carlito_syrichta
ENSCPBG00000006373	POP1	100	62.257	ENSCAPG00000007251	POP1	100	61.793	Cavia_aperea
ENSCPBG00000006373	POP1	100	64.418	ENSCPOG00000002901	POP1	100	63.957	Cavia_porcellus
ENSCPBG00000006373	POP1	100	65.019	ENSCCAG00000018939	POP1	100	64.922	Cebus_capucinus
ENSCPBG00000006373	POP1	100	65.467	ENSCATG00000040916	POP1	100	65.467	Cercocebus_atys
ENSCPBG00000006373	POP1	100	63.220	ENSCLAG00000007208	POP1	97	63.601	Chinchilla_lanigera
ENSCPBG00000006373	POP1	90	67.714	ENSCSAG00000012340	POP1	99	67.714	Chlorocebus_sabaeus
ENSCPBG00000006373	POP1	95	60.861	ENSCHOG00000011432	POP1	99	60.861	Choloepus_hoffmanni
ENSCPBG00000006373	POP1	100	65.370	ENSCANG00000001647	POP1	100	65.370	Colobus_angolensis_palliatus
ENSCPBG00000006373	POP1	100	62.891	ENSCGRG00001017308	Pop1	100	62.500	Cricetulus_griseus_chok1gshd
ENSCPBG00000006373	POP1	100	58.301	ENSCGRG00000010824	Pop1	100	58.008	Cricetulus_griseus_crigri
ENSCPBG00000006373	POP1	100	48.223	ENSCSEG00000008737	POP1	100	47.923	Cynoglossus_semilaevis
ENSCPBG00000006373	POP1	100	49.709	ENSCVAG00000022248	pop1	100	49.466	Cyprinodon_variegatus
ENSCPBG00000006373	POP1	100	62.062	ENSDNOG00000019974	POP1	100	61.801	Dasypus_novemcinctus
ENSCPBG00000006373	POP1	100	55.394	ENSDORG00000015384	Pop1	100	56.378	Dipodomys_ordii
ENSCPBG00000006373	POP1	61	35.182	FBgn0026702	l(1)G0045	97	30.453	Drosophila_melanogaster
ENSCPBG00000006373	POP1	88	58.669	ENSETEG00000007839	POP1	88	57.968	Echinops_telfairi
ENSCPBG00000006373	POP1	52	42.505	ENSEBUG00000009897	pop1	96	41.935	Eptatretus_burgeri
ENSCPBG00000006373	POP1	100	65.010	ENSEASG00005003189	POP1	98	65.103	Equus_asinus_asinus
ENSCPBG00000006373	POP1	100	64.912	ENSECAG00000024236	POP1	100	65.005	Equus_caballus
ENSCPBG00000006373	POP1	63	57.623	ENSEEUG00000003050	-	66	57.399	Erinaceus_europaeus
ENSCPBG00000006373	POP1	100	49.020	ENSELUG00000003526	pop1	100	49.121	Esox_lucius
ENSCPBG00000006373	POP1	100	65.332	ENSFCAG00000002168	POP1	100	65.622	Felis_catus
ENSCPBG00000006373	POP1	100	71.289	ENSFALG00000005711	POP1	100	71.875	Ficedula_albicollis
ENSCPBG00000006373	POP1	100	63.460	ENSFDAG00000017068	POP1	100	63.743	Fukomys_damarensis
ENSCPBG00000006373	POP1	100	49.371	ENSFHEG00000019518	pop1	100	49.612	Fundulus_heteroclitus
ENSCPBG00000006373	POP1	92	48.240	ENSGMOG00000000659	POP1	100	45.709	Gadus_morhua
ENSCPBG00000006373	POP1	100	49.557	ENSGAFG00000019770	POP1	100	49.163	Gambusia_affinis
ENSCPBG00000006373	POP1	100	46.418	ENSGACG00000003499	pop1	100	46.227	Gasterosteus_aculeatus
ENSCPBG00000006373	POP1	100	92.460	ENSGAGG00000011737	POP1	98	92.460	Gopherus_agassizii
ENSCPBG00000006373	POP1	100	64.752	ENSGGOG00000003176	POP1	100	65.272	Gorilla_gorilla
ENSCPBG00000006373	POP1	100	50.144	ENSHBUG00000021583	pop1	100	50.000	Haplochromis_burtoni
ENSCPBG00000006373	POP1	100	63.531	ENSHGLG00000006029	POP1	100	63.813	Heterocephalus_glaber_female
ENSCPBG00000006373	POP1	100	63.531	ENSHGLG00100016879	POP1	100	63.813	Heterocephalus_glaber_male
ENSCPBG00000006373	POP1	91	49.572	ENSHCOG00000013888	pop1	97	49.572	Hippocampus_comes
ENSCPBG00000006373	POP1	100	45.918	ENSIPUG00000018336	pop1	100	44.320	Ictalurus_punctatus
ENSCPBG00000006373	POP1	100	65.725	ENSSTOG00000011455	POP1	97	65.336	Ictidomys_tridecemlineatus
ENSCPBG00000006373	POP1	100	61.759	ENSJJAG00000013325	Pop1	100	61.759	Jaculus_jaculus
ENSCPBG00000006373	POP1	100	49.169	ENSKMAG00000001346	POP1	100	49.314	Kryptolebias_marmoratus
ENSCPBG00000006373	POP1	88	50.829	ENSLBEG00000024457	POP1	95	50.596	Labrus_bergylta
ENSCPBG00000006373	POP1	92	59.417	ENSLACG00000012498	POP1	97	59.873	Latimeria_chalumnae
ENSCPBG00000006373	POP1	100	51.647	ENSLOCG00000009817	POP1	100	51.694	Lepisosteus_oculatus
ENSCPBG00000006373	POP1	100	65.175	ENSLAFG00000010770	POP1	100	64.689	Loxodonta_africana
ENSCPBG00000006373	POP1	100	65.661	ENSMFAG00000000347	POP1	100	65.661	Macaca_fascicularis
ENSCPBG00000006373	POP1	100	65.564	ENSMNEG00000036870	POP1	100	65.564	Macaca_nemestrina
ENSCPBG00000006373	POP1	100	65.661	ENSMLEG00000034986	POP1	100	65.661	Mandrillus_leucophaeus
ENSCPBG00000006373	POP1	100	49.761	ENSMAMG00000004040	pop1	100	49.617	Mastacembelus_armatus
ENSCPBG00000006373	POP1	100	50.144	ENSMZEG00005025448	pop1	100	49.569	Maylandia_zebra
ENSCPBG00000006373	POP1	100	69.466	ENSMGAG00000012167	POP1	100	69.656	Meleagris_gallopavo
ENSCPBG00000006373	POP1	100	63.875	ENSMAUG00000017537	Pop1	100	63.875	Mesocricetus_auratus
ENSCPBG00000006373	POP1	100	64.563	ENSMICG00000004361	POP1	100	64.849	Microcebus_murinus
ENSCPBG00000006373	POP1	100	62.427	ENSMOCG00000006356	Pop1	100	62.170	Microtus_ochrogaster
ENSCPBG00000006373	POP1	100	44.990	ENSMMOG00000018242	pop1	93	47.745	Mola_mola
ENSCPBG00000006373	POP1	100	66.473	ENSMODG00000006561	POP1	100	65.891	Monodelphis_domestica
ENSCPBG00000006373	POP1	100	50.193	ENSMALG00000012621	POP1	100	50.048	Monopterus_albus
ENSCPBG00000006373	POP1	100	61.719	MGP_CAROLIEiJ_G0019726	Pop1	100	61.328	Mus_caroli
ENSCPBG00000006373	POP1	100	61.928	ENSMUSG00000022325	Pop1	100	61.441	Mus_musculus
ENSCPBG00000006373	POP1	100	61.584	MGP_PahariEiJ_G0019735	Pop1	100	61.095	Mus_pahari
ENSCPBG00000006373	POP1	100	62.207	MGP_SPRETEiJ_G0020622	Pop1	100	61.816	Mus_spretus
ENSCPBG00000006373	POP1	100	64.844	ENSMPUG00000015250	POP1	100	64.844	Mustela_putorius_furo
ENSCPBG00000006373	POP1	100	62.072	ENSMLUG00000010204	POP1	100	62.072	Myotis_lucifugus
ENSCPBG00000006373	POP1	100	63.327	ENSNGAG00000001582	Pop1	100	63.716	Nannospalax_galili
ENSCPBG00000006373	POP1	100	47.517	ENSNBRG00000002356	pop1	100	47.322	Neolamprologus_brichardi
ENSCPBG00000006373	POP1	100	65.078	ENSNLEG00000002541	POP1	100	65.078	Nomascus_leucogenys
ENSCPBG00000006373	POP1	92	58.245	ENSMEUG00000003118	POP1	96	58.217	Notamacropus_eugenii
ENSCPBG00000006373	POP1	100	63.029	ENSOPRG00000007667	POP1	100	62.549	Ochotona_princeps
ENSCPBG00000006373	POP1	100	62.183	ENSODEG00000003984	POP1	100	62.695	Octodon_degus
ENSCPBG00000006373	POP1	100	50.533	ENSONIG00000016445	pop1	100	50.144	Oreochromis_niloticus
ENSCPBG00000006373	POP1	60	68.485	ENSOANG00000001278	-	94	68.485	Ornithorhynchus_anatinus
ENSCPBG00000006373	POP1	100	63.372	ENSOCUG00000017400	POP1	100	63.372	Oryctolagus_cuniculus
ENSCPBG00000006373	POP1	100	48.924	ENSORLG00000002839	pop1	100	48.970	Oryzias_latipes
ENSCPBG00000006373	POP1	89	50.546	ENSORLG00020022450	POP1	96	50.438	Oryzias_latipes_hni
ENSCPBG00000006373	POP1	100	48.928	ENSORLG00015012746	POP1	100	48.625	Oryzias_latipes_hsok
ENSCPBG00000006373	POP1	100	50.295	ENSOMEG00000006915	pop1	99	50.098	Oryzias_melastigma
ENSCPBG00000006373	POP1	100	63.077	ENSOGAG00000001466	POP1	100	63.417	Otolemur_garnettii
ENSCPBG00000006373	POP1	100	65.272	ENSPPAG00000018410	POP1	100	65.272	Pan_paniscus
ENSCPBG00000006373	POP1	100	65.073	ENSPPRG00000005002	POP1	100	65.396	Panthera_pardus
ENSCPBG00000006373	POP1	100	65.171	ENSPTIG00000016527	POP1	100	65.460	Panthera_tigris_altaica
ENSCPBG00000006373	POP1	100	65.370	ENSPTRG00000020458	POP1	100	65.370	Pan_troglodytes
ENSCPBG00000006373	POP1	100	65.564	ENSPANG00000009704	POP1	100	65.564	Papio_anubis
ENSCPBG00000006373	POP1	100	51.124	ENSPKIG00000016325	POP1	100	51.024	Paramormyrops_kingsleyae
ENSCPBG00000006373	POP1	100	86.319	ENSPSIG00000012343	POP1	100	85.827	Pelodiscus_sinensis
ENSCPBG00000006373	POP1	90	50.694	ENSPMGG00000022253	POP1	95	51.547	Periophthalmus_magnuspinnatus
ENSCPBG00000006373	POP1	99	62.010	ENSPEMG00000023633	Pop1	100	61.531	Peromyscus_maniculatus_bairdii
ENSCPBG00000006373	POP1	89	43.966	ENSPMAG00000003209	POP1	100	43.638	Petromyzon_marinus
ENSCPBG00000006373	POP1	100	64.376	ENSPCIG00000012216	POP1	100	63.900	Phascolarctos_cinereus
ENSCPBG00000006373	POP1	100	50.488	ENSPFOG00000012490	POP1	100	49.804	Poecilia_formosa
ENSCPBG00000006373	POP1	100	50.294	ENSPLAG00000004646	POP1	100	49.508	Poecilia_latipinna
ENSCPBG00000006373	POP1	100	50.392	ENSPMEG00000019592	POP1	100	49.705	Poecilia_mexicana
ENSCPBG00000006373	POP1	100	50.689	ENSPREG00000020951	POP1	100	50.197	Poecilia_reticulata
ENSCPBG00000006373	POP1	100	65.272	ENSPPYG00000018777	POP1	100	65.272	Pongo_abelii
ENSCPBG00000006373	POP1	100	61.501	ENSPCAG00000016662	POP1	100	61.501	Procavia_capensis
ENSCPBG00000006373	POP1	100	64.757	ENSPCOG00000019420	POP1	100	65.044	Propithecus_coquereli
ENSCPBG00000006373	POP1	100	64.160	ENSPVAG00000014468	POP1	100	64.873	Pteropus_vampyrus
ENSCPBG00000006373	POP1	88	51.050	ENSPNYG00000004476	pop1	95	50.816	Pundamilia_nyererei
ENSCPBG00000006373	POP1	100	46.512	ENSPNAG00000000265	pop1	100	44.486	Pygocentrus_nattereri
ENSCPBG00000006373	POP1	100	62.695	ENSRNOG00000005243	Pop1	100	62.305	Rattus_norvegicus
ENSCPBG00000006373	POP1	100	65.213	ENSRBIG00000007996	POP1	100	65.213	Rhinopithecus_bieti
ENSCPBG00000006373	POP1	100	65.310	ENSRROG00000012334	POP1	100	65.310	Rhinopithecus_roxellana
ENSCPBG00000006373	POP1	99	65.456	ENSSBOG00000020830	POP1	100	65.358	Saimiri_boliviensis_boliviensis
ENSCPBG00000006373	POP1	100	65.179	ENSSHAG00000000296	POP1	100	64.626	Sarcophilus_harrisii
ENSCPBG00000006373	POP1	100	49.182	ENSSFOG00015007429	pop1	99	48.885	Scleropages_formosus
ENSCPBG00000006373	POP1	91	50.480	ENSSMAG00000010467	POP1	95	51.792	Scophthalmus_maximus
ENSCPBG00000006373	POP1	100	48.329	ENSSDUG00000007817	POP1	100	48.555	Seriola_dumerili
ENSCPBG00000006373	POP1	100	48.667	ENSSLDG00000012565	POP1	100	48.713	Seriola_lalandi_dorsalis
ENSCPBG00000006373	POP1	100	73.653	ENSSPUG00000003550	-	100	73.262	Sphenodon_punctatus
ENSCPBG00000006373	POP1	89	52.131	ENSSPAG00000014955	pop1	94	51.795	Stegastes_partitus
ENSCPBG00000006373	POP1	100	64.181	ENSSSCG00000006078	POP1	100	63.592	Sus_scrofa
ENSCPBG00000006373	POP1	91	64.468	ENSTGUG00000012011	-	99	64.416	Taeniopygia_guttata
ENSCPBG00000006373	POP1	89	50.221	ENSTRUG00000010856	pop1	92	50.221	Takifugu_rubripes
ENSCPBG00000006373	POP1	91	50.210	ENSTNIG00000013297	pop1	97	50.426	Tetraodon_nigroviridis
ENSCPBG00000006373	POP1	95	60.958	ENSTBEG00000014214	POP1	99	61.310	Tupaia_belangeri
ENSCPBG00000006373	POP1	100	62.880	ENSTTRG00000016071	POP1	100	62.880	Tursiops_truncatus
ENSCPBG00000006373	POP1	99	63.699	ENSUAMG00000017309	POP1	100	63.699	Ursus_americanus
ENSCPBG00000006373	POP1	100	64.175	ENSUMAG00000016952	POP1	100	71.200	Ursus_maritimus
ENSCPBG00000006373	POP1	84	68.592	ENSVPAG00000008278	POP1	82	68.592	Vicugna_pacos
ENSCPBG00000006373	POP1	100	64.643	ENSVVUG00000010994	POP1	100	64.643	Vulpes_vulpes
ENSCPBG00000006373	POP1	100	45.667	ENSXCOG00000017043	POP1	100	45.098	Xiphophorus_couchianus
ENSCPBG00000006373	POP1	100	49.460	ENSXMAG00000002472	POP1	100	49.064	Xiphophorus_maculatus