EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000006402 (Gene tree)
Gene ID: 101945887
Gene Symbol: SYNJ1
Alias: INPP5G|PARK20
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 98714 bases
Position: chrKK088238.1:5430456-5529169
Accession: 11503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000008175	Exo_endo_phos	PF03372.23	2.7e-15	1	1
ENSCPBP00000008168	Exo_endo_phos	PF03372.23	2.8e-15	1	1
ENSCPBP00000008183	Exo_endo_phos	PF03372.23	2.9e-15	1	1
ENSCPBP00000008175	DUF1866	PF08952.11	8.4e-56	1	1
ENSCPBP00000008168	DUF1866	PF08952.11	8.7e-56	1	1
ENSCPBP00000008183	DUF1866	PF08952.11	8.8e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000009844	SYNJ1-202	3836	XM_024102757	ENSCPBP00000008175	1242 (aa)	XP_023958525	-
ENSCPBT00000009852	SYNJ1-203	3910	-	ENSCPBP00000008183	1285 (aa)	-	-
ENSCPBT00000009837	SYNJ1-201	3914	XM_008165283	ENSCPBP00000008168	1268 (aa)	XP_008163505	-

Gene Model

Click here to download ENSCPBG00000006402's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic00562	Inositol phosphate metabolism	KEGG
cpic01100	Metabolic pathways	KEGG
cpic04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000006402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000006402	SYNJ1	85	55.127	ENSCPBG00000016273	SYNJ2	68	56.015

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000006402	SYNJ1	100	86.552	ENSG00000159082	SYNJ1	100	93.237	Homo_sapiens
ENSCPBG00000006402	SYNJ1	96	71.600	ENSAPOG00000002809	synj1	89	73.568	Acanthochromis_polyacanthus
ENSCPBG00000006402	SYNJ1	97	87.803	ENSAMEG00000015028	SYNJ1	79	86.385	Ailuropoda_melanoleuca
ENSCPBG00000006402	SYNJ1	96	68.149	ENSACIG00000008857	synj1	91	68.569	Amphilophus_citrinellus
ENSCPBG00000006402	SYNJ1	96	72.690	ENSAOCG00000009835	synj1	89	73.508	Amphiprion_ocellaris
ENSCPBG00000006402	SYNJ1	87	76.627	ENSAPEG00000021010	synj1	71	72.577	Amphiprion_percula
ENSCPBG00000006402	SYNJ1	87	75.846	ENSATEG00000002306	synj1	71	71.782	Anabas_testudineus
ENSCPBG00000006402	SYNJ1	97	90.442	ENSAPLG00000011832	SYNJ1	78	90.442	Anas_platyrhynchos
ENSCPBG00000006402	SYNJ1	97	87.409	ENSACAG00000003006	-	94	87.409	Anolis_carolinensis
ENSCPBG00000006402	SYNJ1	100	86.792	ENSANAG00000027325	SYNJ1	95	86.172	Aotus_nancymaae
ENSCPBG00000006402	SYNJ1	96	71.648	ENSACLG00000002255	synj1	91	72.347	Astatotilapia_calliptera
ENSCPBG00000006402	SYNJ1	87	77.064	ENSAMXG00000008208	synj1	74	71.197	Astyanax_mexicanus
ENSCPBG00000006402	SYNJ1	97	88.402	ENSBTAG00000003063	SYNJ1	94	87.832	Bos_taurus
ENSCPBG00000006402	SYNJ1	100	85.965	ENSCJAG00000009187	SYNJ1	95	86.172	Callithrix_jacchus
ENSCPBG00000006402	SYNJ1	97	88.690	ENSCAFG00000009041	SYNJ1	94	85.785	Canis_familiaris
ENSCPBG00000006402	SYNJ1	97	87.811	ENSCAFG00020025776	SYNJ1	94	82.292	Canis_lupus_dingo
ENSCPBG00000006402	SYNJ1	97	87.490	ENSCHIG00000005095	SYNJ1	79	87.192	Capra_hircus
ENSCPBG00000006402	SYNJ1	100	85.848	ENSTSYG00000014541	SYNJ1	95	85.859	Carlito_syrichta
ENSCPBG00000006402	SYNJ1	93	76.712	ENSCAPG00000014483	SYNJ1	83	77.055	Cavia_aperea
ENSCPBG00000006402	SYNJ1	100	86.317	ENSCPOG00000012182	SYNJ1	94	88.126	Cavia_porcellus
ENSCPBG00000006402	SYNJ1	100	86.094	ENSCCAG00000020825	SYNJ1	95	86.016	Cebus_capucinus
ENSCPBG00000006402	SYNJ1	97	87.470	ENSCATG00000033891	SYNJ1	95	86.239	Cercocebus_atys
ENSCPBG00000006402	SYNJ1	100	86.239	ENSCLAG00000009796	SYNJ1	100	93.362	Chinchilla_lanigera
ENSCPBG00000006402	SYNJ1	97	87.803	ENSCSAG00000009654	SYNJ1	94	87.803	Chlorocebus_sabaeus
ENSCPBG00000006402	SYNJ1	77	86.971	ENSCHOG00000012390	SYNJ1	64	86.971	Choloepus_hoffmanni
ENSCPBG00000006402	SYNJ1	100	86.317	ENSCANG00000031359	SYNJ1	95	86.239	Colobus_angolensis_palliatus
ENSCPBG00000006402	SYNJ1	97	86.974	ENSCGRG00001010861	Synj1	94	86.974	Cricetulus_griseus_chok1gshd
ENSCPBG00000006402	SYNJ1	97	86.974	ENSCGRG00000015749	Synj1	100	92.929	Cricetulus_griseus_crigri
ENSCPBG00000006402	SYNJ1	87	76.277	ENSCSEG00000019614	synj1	93	73.537	Cynoglossus_semilaevis
ENSCPBG00000006402	SYNJ1	87	74.599	ENSCVAG00000019250	synj1	90	72.397	Cyprinodon_variegatus
ENSCPBG00000006402	SYNJ1	87	77.049	ENSDARG00000025011	synj1	92	71.233	Danio_rerio
ENSCPBG00000006402	SYNJ1	97	83.788	ENSDNOG00000010732	SYNJ1	80	83.626	Dasypus_novemcinctus
ENSCPBG00000006402	SYNJ1	56	93.074	ENSDORG00000014735	-	100	93.074	Dipodomys_ordii
ENSCPBG00000006402	SYNJ1	81	90.598	ENSETEG00000018674	SYNJ1	66	90.598	Echinops_telfairi
ENSCPBG00000006402	SYNJ1	97	88.201	ENSEASG00005006287	SYNJ1	99	89.712	Equus_asinus_asinus
ENSCPBG00000006402	SYNJ1	97	88.155	ENSECAG00000004829	SYNJ1	94	86.860	Equus_caballus
ENSCPBG00000006402	SYNJ1	86	84.428	ENSEEUG00000005150	SYNJ1	74	83.114	Erinaceus_europaeus
ENSCPBG00000006402	SYNJ1	87	73.945	ENSELUG00000009731	synj1	89	67.388	Esox_lucius
ENSCPBG00000006402	SYNJ1	97	87.231	ENSFCAG00000012498	SYNJ1	94	86.814	Felis_catus
ENSCPBG00000006402	SYNJ1	70	84.181	ENSFALG00000004680	SYNJ1	73	84.181	Ficedula_albicollis
ENSCPBG00000006402	SYNJ1	97	87.722	ENSFDAG00000016818	SYNJ1	100	93.074	Fukomys_damarensis
ENSCPBG00000006402	SYNJ1	96	69.576	ENSFHEG00000017689	synj1	74	70.040	Fundulus_heteroclitus
ENSCPBG00000006402	SYNJ1	80	73.188	ENSGMOG00000014852	synj1	77	73.405	Gadus_morhua
ENSCPBG00000006402	SYNJ1	97	89.129	ENSGALG00000034317	SYNJ1	77	89.295	Gallus_gallus
ENSCPBG00000006402	SYNJ1	87	75.661	ENSGAFG00000019466	synj1	72	71.617	Gambusia_affinis
ENSCPBG00000006402	SYNJ1	87	71.429	ENSGACG00000020575	synj1	90	67.623	Gasterosteus_aculeatus
ENSCPBG00000006402	SYNJ1	97	97.270	ENSGAGG00000022523	SYNJ1	94	95.850	Gopherus_agassizii
ENSCPBG00000006402	SYNJ1	100	86.317	ENSGGOG00000015945	SYNJ1	95	86.161	Gorilla_gorilla
ENSCPBG00000006402	SYNJ1	96	71.648	ENSHBUG00000007774	synj1	92	71.531	Haplochromis_burtoni
ENSCPBG00000006402	SYNJ1	97	87.480	ENSHGLG00000006420	SYNJ1	100	93.218	Heterocephalus_glaber_female
ENSCPBG00000006402	SYNJ1	97	87.149	ENSHGLG00100012591	SYNJ1	100	93.218	Heterocephalus_glaber_male
ENSCPBG00000006402	SYNJ1	96	67.910	ENSHCOG00000012774	synj1	93	68.408	Hippocampus_comes
ENSCPBG00000006402	SYNJ1	87	77.410	ENSIPUG00000010691	SYNJ1	76	74.003	Ictalurus_punctatus
ENSCPBG00000006402	SYNJ1	100	86.630	ENSSTOG00000015806	SYNJ1	94	88.943	Ictidomys_tridecemlineatus
ENSCPBG00000006402	SYNJ1	97	82.195	ENSJJAG00000020168	Synj1	78	82.439	Jaculus_jaculus
ENSCPBG00000006402	SYNJ1	88	75.996	ENSKMAG00000004221	synj1	95	73.828	Kryptolebias_marmoratus
ENSCPBG00000006402	SYNJ1	88	75.362	ENSLBEG00000015081	synj1	92	68.979	Labrus_bergylta
ENSCPBG00000006402	SYNJ1	93	80.718	ENSLACG00000005928	SYNJ1	75	81.880	Latimeria_chalumnae
ENSCPBG00000006402	SYNJ1	97	78.732	ENSLOCG00000009230	synj1	83	78.652	Lepisosteus_oculatus
ENSCPBG00000006402	SYNJ1	97	87.138	ENSLAFG00000011806	SYNJ1	79	87.379	Loxodonta_africana
ENSCPBG00000006402	SYNJ1	94	86.921	ENSMFAG00000018883	SYNJ1	93	87.563	Macaca_fascicularis
ENSCPBG00000006402	SYNJ1	97	87.429	ENSMMUG00000004624	SYNJ1	94	87.429	Macaca_mulatta
ENSCPBG00000006402	SYNJ1	97	87.400	ENSMNEG00000040077	SYNJ1	90	87.390	Macaca_nemestrina
ENSCPBG00000006402	SYNJ1	97	87.470	ENSMLEG00000037029	SYNJ1	95	86.239	Mandrillus_leucophaeus
ENSCPBG00000006402	SYNJ1	96	70.626	ENSMAMG00000013404	synj1	72	71.659	Mastacembelus_armatus
ENSCPBG00000006402	SYNJ1	87	76.212	ENSMZEG00005024358	synj1	91	70.650	Maylandia_zebra
ENSCPBG00000006402	SYNJ1	97	89.022	ENSMGAG00000014522	SYNJ1	79	89.022	Meleagris_gallopavo
ENSCPBG00000006402	SYNJ1	97	86.812	ENSMAUG00000009743	Synj1	100	93.074	Mesocricetus_auratus
ENSCPBG00000006402	SYNJ1	97	87.328	ENSMICG00000034953	SYNJ1	95	85.859	Microcebus_murinus
ENSCPBG00000006402	SYNJ1	91	72.322	ENSMMOG00000010203	synj1	98	68.755	Mola_mola
ENSCPBG00000006402	SYNJ1	97	79.371	ENSMODG00000021073	SYNJ1	94	79.371	Monodelphis_domestica
ENSCPBG00000006402	SYNJ1	96	68.789	ENSMALG00000014015	synj1	72	73.554	Monopterus_albus
ENSCPBG00000006402	SYNJ1	97	87.298	MGP_CAROLIEiJ_G0020951	Synj1	100	93.218	Mus_caroli
ENSCPBG00000006402	SYNJ1	97	87.540	ENSMUSG00000022973	Synj1	100	93.506	Mus_musculus
ENSCPBG00000006402	SYNJ1	97	87.379	MGP_PahariEiJ_G0016656	Synj1	100	93.506	Mus_pahari
ENSCPBG00000006402	SYNJ1	97	87.783	MGP_SPRETEiJ_G0021857	Synj1	100	93.795	Mus_spretus
ENSCPBG00000006402	SYNJ1	97	87.460	ENSMPUG00000001153	SYNJ1	79	87.460	Mustela_putorius_furo
ENSCPBG00000006402	SYNJ1	57	78.883	ENSMLUG00000005764	-	69	78.883	Myotis_lucifugus
ENSCPBG00000006402	SYNJ1	54	90.896	ENSMLUG00000026584	-	100	91.259	Myotis_lucifugus
ENSCPBG00000006402	SYNJ1	97	87.621	ENSNGAG00000000453	Synj1	100	93.218	Nannospalax_galili
ENSCPBG00000006402	SYNJ1	87	73.028	ENSNBRG00000011936	synj1	91	65.785	Neolamprologus_brichardi
ENSCPBG00000006402	SYNJ1	84	85.518	ENSNLEG00000003734	SYNJ1	93	82.192	Nomascus_leucogenys
ENSCPBG00000006402	SYNJ1	90	74.197	ENSMEUG00000004158	-	73	74.197	Notamacropus_eugenii
ENSCPBG00000006402	SYNJ1	87	89.024	ENSOPRG00000013602	SYNJ1	71	88.171	Ochotona_princeps
ENSCPBG00000006402	SYNJ1	56	93.651	ENSODEG00000002409	-	100	93.651	Octodon_degus
ENSCPBG00000006402	SYNJ1	97	72.173	ENSONIG00000004667	synj1	87	72.800	Oreochromis_niloticus
ENSCPBG00000006402	SYNJ1	93	85.443	ENSOANG00000006929	SYNJ1	78	85.525	Ornithorhynchus_anatinus
ENSCPBG00000006402	SYNJ1	97	84.342	ENSOCUG00000001420	SYNJ1	78	84.262	Oryctolagus_cuniculus
ENSCPBG00000006402	SYNJ1	87	75.545	ENSORLG00000004320	synj1	90	72.966	Oryzias_latipes
ENSCPBG00000006402	SYNJ1	87	74.000	ENSORLG00020011994	synj1	90	68.442	Oryzias_latipes_hni
ENSCPBG00000006402	SYNJ1	87	76.374	ENSORLG00015018077	synj1	70	71.947	Oryzias_latipes_hsok
ENSCPBG00000006402	SYNJ1	87	76.282	ENSOMEG00000014322	synj1	90	69.422	Oryzias_melastigma
ENSCPBG00000006402	SYNJ1	100	82.481	ENSOGAG00000006010	SYNJ1	79	82.737	Otolemur_garnettii
ENSCPBG00000006402	SYNJ1	100	85.504	ENSOARG00000013414	SYNJ1	79	85.481	Ovis_aries
ENSCPBG00000006402	SYNJ1	100	86.630	ENSPPAG00000026784	SYNJ1	95	86.474	Pan_paniscus
ENSCPBG00000006402	SYNJ1	97	87.480	ENSPPRG00000023469	SYNJ1	94	86.896	Panthera_pardus
ENSCPBG00000006402	SYNJ1	97	87.460	ENSPTIG00000007930	SYNJ1	94	86.978	Panthera_tigris_altaica
ENSCPBG00000006402	SYNJ1	100	86.552	ENSPTRG00000023787	SYNJ1	95	86.474	Pan_troglodytes
ENSCPBG00000006402	SYNJ1	100	84.836	ENSPTRG00000048135	-	94	86.281	Pan_troglodytes
ENSCPBG00000006402	SYNJ1	97	87.722	ENSPANG00000022531	SYNJ1	94	87.722	Papio_anubis
ENSCPBG00000006402	SYNJ1	91	77.576	ENSPKIG00000022603	synj1	96	76.283	Paramormyrops_kingsleyae
ENSCPBG00000006402	SYNJ1	87	76.051	ENSPMGG00000016831	synj1	84	69.453	Periophthalmus_magnuspinnatus
ENSCPBG00000006402	SYNJ1	97	87.298	ENSPEMG00000018767	Synj1	100	92.929	Peromyscus_maniculatus_bairdii
ENSCPBG00000006402	SYNJ1	82	61.583	ENSPMAG00000002887	synj1	80	60.781	Petromyzon_marinus
ENSCPBG00000006402	SYNJ1	97	85.575	ENSPCIG00000016372	SYNJ1	94	85.656	Phascolarctos_cinereus
ENSCPBG00000006402	SYNJ1	87	76.113	ENSPFOG00000016886	synj1	89	71.452	Poecilia_formosa
ENSCPBG00000006402	SYNJ1	96	70.073	ENSPLAG00000017559	synj1	90	69.624	Poecilia_latipinna
ENSCPBG00000006402	SYNJ1	96	70.113	ENSPMEG00000007643	synj1	73	71.452	Poecilia_mexicana
ENSCPBG00000006402	SYNJ1	96	69.416	ENSPREG00000012412	synj1	90	73.169	Poecilia_reticulata
ENSCPBG00000006402	SYNJ1	100	86.474	ENSPPYG00000011365	SYNJ1	91	86.396	Pongo_abelii
ENSCPBG00000006402	SYNJ1	80	90.000	ENSPCAG00000009906	SYNJ1	68	90.000	Procavia_capensis
ENSCPBG00000006402	SYNJ1	88	87.218	ENSPCOG00000024841	SYNJ1	89	82.589	Propithecus_coquereli
ENSCPBG00000006402	SYNJ1	97	82.956	ENSPVAG00000000892	SYNJ1	79	82.956	Pteropus_vampyrus
ENSCPBG00000006402	SYNJ1	87	75.252	ENSPNYG00000022989	synj1	92	69.782	Pundamilia_nyererei
ENSCPBG00000006402	SYNJ1	87	77.072	ENSPNAG00000021119	synj1	91	76.615	Pygocentrus_nattereri
ENSCPBG00000006402	SYNJ1	97	87.460	ENSRNOG00000002051	Synj1	94	87.248	Rattus_norvegicus
ENSCPBG00000006402	SYNJ1	100	86.317	ENSRBIG00000034477	SYNJ1	95	86.239	Rhinopithecus_bieti
ENSCPBG00000006402	SYNJ1	100	86.396	ENSRROG00000039256	SYNJ1	95	86.317	Rhinopithecus_roxellana
ENSCPBG00000006402	SYNJ1	97	87.977	ENSSBOG00000021001	SYNJ1	95	86.016	Saimiri_boliviensis_boliviensis
ENSCPBG00000006402	SYNJ1	97	84.193	ENSSHAG00000008538	SYNJ1	80	82.706	Sarcophilus_harrisii
ENSCPBG00000006402	SYNJ1	96	75.122	ENSSFOG00015006095	synj1	77	74.878	Scleropages_formosus
ENSCPBG00000006402	SYNJ1	87	75.686	ENSSMAG00000018066	synj1	89	69.187	Scophthalmus_maximus
ENSCPBG00000006402	SYNJ1	88	76.492	ENSSDUG00000013058	synj1	73	71.267	Seriola_dumerili
ENSCPBG00000006402	SYNJ1	88	76.636	ENSSLDG00000021406	synj1	90	72.227	Seriola_lalandi_dorsalis
ENSCPBG00000006402	SYNJ1	63	92.293	ENSSARG00000009490	SYNJ1	56	91.165	Sorex_araneus
ENSCPBG00000006402	SYNJ1	97	88.631	ENSSPUG00000012552	SYNJ1	78	88.797	Sphenodon_punctatus
ENSCPBG00000006402	SYNJ1	87	76.810	ENSSPAG00000017029	synj1	89	69.721	Stegastes_partitus
ENSCPBG00000006402	SYNJ1	81	76.326	ENSSPAG00000006812	SYNJ1	72	70.266	Stegastes_partitus
ENSCPBG00000006402	SYNJ1	97	86.747	ENSSSCG00000012035	SYNJ1	94	86.908	Sus_scrofa
ENSCPBG00000006402	SYNJ1	97	88.746	ENSTGUG00000013445	SYNJ1	79	88.746	Taeniopygia_guttata
ENSCPBG00000006402	SYNJ1	96	69.727	ENSTRUG00000006907	synj1	83	76.623	Takifugu_rubripes
ENSCPBG00000006402	SYNJ1	97	69.562	ENSTNIG00000009940	synj1	93	69.603	Tetraodon_nigroviridis
ENSCPBG00000006402	SYNJ1	88	80.830	ENSTBEG00000016298	SYNJ1	71	80.830	Tupaia_belangeri
ENSCPBG00000006402	SYNJ1	97	77.913	ENSTTRG00000002222	SYNJ1	79	79.450	Tursiops_truncatus
ENSCPBG00000006402	SYNJ1	97	86.964	ENSUAMG00000018606	SYNJ1	99	92.155	Ursus_americanus
ENSCPBG00000006402	SYNJ1	96	87.604	ENSUMAG00000018419	SYNJ1	99	92.161	Ursus_maritimus
ENSCPBG00000006402	SYNJ1	80	91.315	ENSVPAG00000001241	SYNJ1	65	91.315	Vicugna_pacos
ENSCPBG00000006402	SYNJ1	97	88.474	ENSVVUG00000023125	SYNJ1	94	88.116	Vulpes_vulpes
ENSCPBG00000006402	SYNJ1	97	78.503	ENSXETG00000009899	synj1	79	79.124	Xenopus_tropicalis
ENSCPBG00000006402	SYNJ1	87	76.364	ENSXCOG00000011896	synj1	90	71.452	Xiphophorus_couchianus
ENSCPBG00000006402	SYNJ1	96	69.656	ENSXMAG00000017524	synj1	90	73.295	Xiphophorus_maculatus