EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000006454 (Gene tree)
Gene ID: 101945610
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 76883 bases
Position: chrKK088238.1:5659737-5736619
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000008247	Npa1	PF11707.8	2.5e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000009927	URB1-201	7741	-	ENSCPBP00000008247	2290 (aa)	XP_005283998	UPI000388C993

Gene Model

Click here to download ENSCPBG00000006454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000006454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000006454	URB1	99	59.309	ENSG00000142207	URB1	99	59.379	Homo_sapiens
ENSCPBG00000006454	URB1	96	62.112	ENSAPOG00000020308	urb1	99	62.112	Acanthochromis_polyacanthus
ENSCPBG00000006454	URB1	99	58.257	ENSAMEG00000011998	URB1	99	58.344	Ailuropoda_melanoleuca
ENSCPBG00000006454	URB1	95	46.394	ENSACIG00000003248	urb1	97	46.511	Amphilophus_citrinellus
ENSCPBG00000006454	URB1	99	43.761	ENSAOCG00000010364	urb1	99	43.631	Amphiprion_ocellaris
ENSCPBG00000006454	URB1	97	55.799	ENSAPEG00000010758	urb1	99	55.277	Amphiprion_percula
ENSCPBG00000006454	URB1	99	46.493	ENSATEG00000011790	urb1	99	46.288	Anabas_testudineus
ENSCPBG00000006454	URB1	97	75.857	ENSAPLG00000012791	URB1	99	75.857	Anas_platyrhynchos
ENSCPBG00000006454	URB1	99	67.393	ENSACAG00000002817	URB1	99	67.393	Anolis_carolinensis
ENSCPBG00000006454	URB1	99	59.568	ENSANAG00000024617	URB1	99	59.353	Aotus_nancymaae
ENSCPBG00000006454	URB1	99	47.757	ENSACLG00000024865	urb1	99	47.458	Astatotilapia_calliptera
ENSCPBG00000006454	URB1	99	41.707	ENSAMXG00000012306	urb1	99	41.801	Astyanax_mexicanus
ENSCPBG00000006454	URB1	99	57.510	ENSBTAG00000012412	URB1	99	57.815	Bos_taurus
ENSCPBG00000006454	URB1	99	59.095	ENSCJAG00000009118	URB1	99	58.885	Callithrix_jacchus
ENSCPBG00000006454	URB1	99	59.565	ENSCAFG00000008892	URB1	99	59.565	Canis_familiaris
ENSCPBG00000006454	URB1	99	58.544	ENSCAFG00020025994	-	99	58.544	Canis_lupus_dingo
ENSCPBG00000006454	URB1	99	59.198	ENSCAFG00020025987	-	99	59.198	Canis_lupus_dingo
ENSCPBG00000006454	URB1	99	57.180	ENSCHIG00000015645	URB1	99	57.267	Capra_hircus
ENSCPBG00000006454	URB1	99	59.259	ENSTSYG00000013286	URB1	99	59.259	Carlito_syrichta
ENSCPBG00000006454	URB1	98	56.774	ENSCAPG00000015589	URB1	99	56.774	Cavia_aperea
ENSCPBG00000006454	URB1	99	57.367	ENSCPOG00000006748	URB1	99	57.367	Cavia_porcellus
ENSCPBG00000006454	URB1	99	59.371	ENSCCAG00000021299	URB1	99	59.423	Cebus_capucinus
ENSCPBG00000006454	URB1	99	59.135	ENSCATG00000042630	URB1	99	59.309	Cercocebus_atys
ENSCPBG00000006454	URB1	99	58.017	ENSCLAG00000005262	URB1	99	57.835	Chinchilla_lanigera
ENSCPBG00000006454	URB1	99	58.094	ENSCSAG00000009584	URB1	99	58.268	Chlorocebus_sabaeus
ENSCPBG00000006454	URB1	99	58.654	ENSCANG00000031088	URB1	99	58.829	Colobus_angolensis_palliatus
ENSCPBG00000006454	URB1	99	57.578	ENSCGRG00001010616	Urb1	99	57.467	Cricetulus_griseus_chok1gshd
ENSCPBG00000006454	URB1	98	57.716	ENSCGRG00000015840	Urb1	99	57.716	Cricetulus_griseus_crigri
ENSCPBG00000006454	URB1	99	45.356	ENSCSEG00000012616	urb1	99	45.356	Cynoglossus_semilaevis
ENSCPBG00000006454	URB1	92	57.758	ENSCVAG00000009076	urb1	99	57.793	Cyprinodon_variegatus
ENSCPBG00000006454	URB1	99	46.063	ENSDARG00000060308	urb1	99	46.261	Danio_rerio
ENSCPBG00000006454	URB1	85	62.551	ENSDNOG00000015586	URB1	99	62.859	Dasypus_novemcinctus
ENSCPBG00000006454	URB1	99	58.072	ENSDORG00000006735	Urb1	99	58.108	Dipodomys_ordii
ENSCPBG00000006454	URB1	91	64.312	ENSETEG00000009080	URB1	91	65.918	Echinops_telfairi
ENSCPBG00000006454	URB1	99	58.693	ENSEASG00005007711	URB1	98	62.771	Equus_asinus_asinus
ENSCPBG00000006454	URB1	97	68.249	ENSECAG00000013206	URB1	99	68.249	Equus_caballus
ENSCPBG00000006454	URB1	54	69.167	ENSEEUG00000003626	-	54	69.167	Erinaceus_europaeus
ENSCPBG00000006454	URB1	99	45.423	ENSELUG00000020516	urb1	99	45.640	Esox_lucius
ENSCPBG00000006454	URB1	99	58.533	ENSFCAG00000002177	URB1	99	58.700	Felis_catus
ENSCPBG00000006454	URB1	98	62.927	ENSFALG00000004636	URB1	99	62.749	Ficedula_albicollis
ENSCPBG00000006454	URB1	99	57.357	ENSFDAG00000007288	URB1	95	57.043	Fukomys_damarensis
ENSCPBG00000006454	URB1	99	43.522	ENSFHEG00000000202	urb1	99	44.367	Fundulus_heteroclitus
ENSCPBG00000006454	URB1	93	47.537	ENSGMOG00000001838	urb1	94	47.537	Gadus_morhua
ENSCPBG00000006454	URB1	100	75.305	ENSGALG00000015887	URB1	100	75.305	Gallus_gallus
ENSCPBG00000006454	URB1	98	45.282	ENSGAFG00000020694	urb1	98	45.194	Gambusia_affinis
ENSCPBG00000006454	URB1	99	47.868	ENSGACG00000011703	urb1	99	47.954	Gasterosteus_aculeatus
ENSCPBG00000006454	URB1	100	95.766	ENSGAGG00000022544	URB1	100	95.766	Gopherus_agassizii
ENSCPBG00000006454	URB1	99	59.284	ENSGGOG00000000285	URB1	99	59.335	Gorilla_gorilla
ENSCPBG00000006454	URB1	99	47.753	ENSHBUG00000001904	urb1	99	47.453	Haplochromis_burtoni
ENSCPBG00000006454	URB1	99	57.032	ENSHGLG00000004907	URB1	99	56.989	Heterocephalus_glaber_female
ENSCPBG00000006454	URB1	99	57.429	ENSHGLG00100010749	URB1	99	57.386	Heterocephalus_glaber_male
ENSCPBG00000006454	URB1	70	55.218	ENSHCOG00000018683	urb1	98	55.218	Hippocampus_comes
ENSCPBG00000006454	URB1	99	42.190	ENSIPUG00000014721	urb1	99	42.158	Ictalurus_punctatus
ENSCPBG00000006454	URB1	99	58.536	ENSSTOG00000004539	URB1	99	58.214	Ictidomys_tridecemlineatus
ENSCPBG00000006454	URB1	93	50.422	ENSKMAG00000006001	urb1	99	50.306	Kryptolebias_marmoratus
ENSCPBG00000006454	URB1	96	44.309	ENSLBEG00000027208	urb1	99	44.175	Labrus_bergylta
ENSCPBG00000006454	URB1	99	55.387	ENSLACG00000017059	URB1	99	55.431	Latimeria_chalumnae
ENSCPBG00000006454	URB1	99	49.501	ENSLOCG00000009190	urb1	99	49.523	Lepisosteus_oculatus
ENSCPBG00000006454	URB1	99	59.712	ENSLAFG00000010407	URB1	99	59.581	Loxodonta_africana
ENSCPBG00000006454	URB1	99	59.101	ENSMFAG00000034391	URB1	96	59.222	Macaca_fascicularis
ENSCPBG00000006454	URB1	99	59.014	ENSMMUG00000010295	URB1	99	59.135	Macaca_mulatta
ENSCPBG00000006454	URB1	99	57.879	ENSMNEG00000032981	URB1	99	57.962	Macaca_nemestrina
ENSCPBG00000006454	URB1	99	59.222	ENSMLEG00000041435	URB1	99	59.353	Mandrillus_leucophaeus
ENSCPBG00000006454	URB1	99	45.511	ENSMAMG00000011238	urb1	98	45.394	Mastacembelus_armatus
ENSCPBG00000006454	URB1	99	43.723	ENSMZEG00005011862	urb1	99	43.473	Maylandia_zebra
ENSCPBG00000006454	URB1	98	75.945	ENSMGAG00000014512	URB1	100	75.945	Meleagris_gallopavo
ENSCPBG00000006454	URB1	92	61.505	ENSMAUG00000010516	Urb1	99	61.650	Mesocricetus_auratus
ENSCPBG00000006454	URB1	99	57.959	ENSMICG00000016424	URB1	99	58.046	Microcebus_murinus
ENSCPBG00000006454	URB1	99	55.988	ENSMOCG00000012613	Urb1	99	55.988	Microtus_ochrogaster
ENSCPBG00000006454	URB1	99	61.878	ENSMODG00000021076	URB1	99	61.683	Monodelphis_domestica
ENSCPBG00000006454	URB1	96	56.344	ENSMALG00000017411	urb1	99	56.620	Monopterus_albus
ENSCPBG00000006454	URB1	99	56.993	MGP_CAROLIEiJ_G0020948	Urb1	99	56.950	Mus_caroli
ENSCPBG00000006454	URB1	99	56.993	ENSMUSG00000039929	Urb1	99	56.993	Mus_musculus
ENSCPBG00000006454	URB1	99	56.813	MGP_PahariEiJ_G0016653	Urb1	99	56.869	Mus_pahari
ENSCPBG00000006454	URB1	99	56.776	MGP_SPRETEiJ_G0021854	Urb1	99	56.776	Mus_spretus
ENSCPBG00000006454	URB1	99	58.847	ENSMPUG00000001123	URB1	99	58.803	Mustela_putorius_furo
ENSCPBG00000006454	URB1	99	56.757	ENSNGAG00000001905	Urb1	99	56.670	Nannospalax_galili
ENSCPBG00000006454	URB1	82	48.016	ENSNBRG00000001049	urb1	99	47.948	Neolamprologus_brichardi
ENSCPBG00000006454	URB1	99	57.649	ENSNLEG00000026872	URB1	99	57.761	Nomascus_leucogenys
ENSCPBG00000006454	URB1	93	63.671	ENSMEUG00000010828	URB1	94	62.664	Notamacropus_eugenii
ENSCPBG00000006454	URB1	99	55.041	ENSOPRG00000013482	URB1	99	55.041	Ochotona_princeps
ENSCPBG00000006454	URB1	99	57.598	ENSODEG00000002587	URB1	99	57.598	Octodon_degus
ENSCPBG00000006454	URB1	99	47.694	ENSONIG00000005599	urb1	99	47.480	Oreochromis_niloticus
ENSCPBG00000006454	URB1	99	58.831	ENSOCUG00000009381	URB1	99	58.788	Oryctolagus_cuniculus
ENSCPBG00000006454	URB1	99	46.231	ENSORLG00000003429	urb1	99	46.120	Oryzias_latipes
ENSCPBG00000006454	URB1	99	46.043	ENSORLG00020013785	urb1	99	45.933	Oryzias_latipes_hni
ENSCPBG00000006454	URB1	97	54.891	ENSORLG00015019421	urb1	99	54.891	Oryzias_latipes_hsok
ENSCPBG00000006454	URB1	73	57.000	ENSOMEG00000002094	urb1	97	57.000	Oryzias_melastigma
ENSCPBG00000006454	URB1	99	58.592	ENSOGAG00000017140	URB1	99	58.628	Otolemur_garnettii
ENSCPBG00000006454	URB1	99	51.676	ENSOARG00000013679	URB1	99	51.526	Ovis_aries
ENSCPBG00000006454	URB1	99	59.371	ENSPPAG00000003423	URB1	99	59.423	Pan_paniscus
ENSCPBG00000006454	URB1	99	58.962	ENSPPRG00000023131	URB1	99	59.085	Panthera_pardus
ENSCPBG00000006454	URB1	91	59.254	ENSPTIG00000016125	URB1	97	59.392	Panthera_tigris_altaica
ENSCPBG00000006454	URB1	99	59.284	ENSPTRG00000013852	URB1	99	59.335	Pan_troglodytes
ENSCPBG00000006454	URB1	99	59.091	ENSPANG00000021964	URB1	99	59.266	Papio_anubis
ENSCPBG00000006454	URB1	99	47.943	ENSPKIG00000003683	urb1	96	48.365	Paramormyrops_kingsleyae
ENSCPBG00000006454	URB1	99	57.000	ENSPEMG00000021205	Urb1	99	57.000	Peromyscus_maniculatus_bairdii
ENSCPBG00000006454	URB1	80	33.246	ENSPMAG00000009733	URB1	99	34.407	Petromyzon_marinus
ENSCPBG00000006454	URB1	99	61.747	ENSPCIG00000016350	URB1	99	61.984	Phascolarctos_cinereus
ENSCPBG00000006454	URB1	97	45.516	ENSPLAG00000004371	urb1	99	45.381	Poecilia_latipinna
ENSCPBG00000006454	URB1	99	46.214	ENSPMEG00000006634	urb1	99	46.084	Poecilia_mexicana
ENSCPBG00000006454	URB1	99	46.244	ENSPREG00000013453	urb1	99	46.157	Poecilia_reticulata
ENSCPBG00000006454	URB1	99	58.950	ENSPPYG00000011359	URB1	99	58.968	Pongo_abelii
ENSCPBG00000006454	URB1	99	50.785	ENSPCAG00000007430	URB1	99	50.654	Procavia_capensis
ENSCPBG00000006454	URB1	99	58.577	ENSPCOG00000022695	URB1	99	58.708	Propithecus_coquereli
ENSCPBG00000006454	URB1	99	57.080	ENSPVAG00000000889	URB1	99	57.037	Pteropus_vampyrus
ENSCPBG00000006454	URB1	99	46.614	ENSPNYG00000010589	urb1	99	46.371	Pundamilia_nyererei
ENSCPBG00000006454	URB1	99	43.098	ENSPNAG00000019324	urb1	99	43.167	Pygocentrus_nattereri
ENSCPBG00000006454	URB1	99	56.732	ENSRNOG00000002080	Urb1	99	56.906	Rattus_norvegicus
ENSCPBG00000006454	URB1	99	58.523	ENSRBIG00000033122	URB1	99	58.741	Rhinopithecus_bieti
ENSCPBG00000006454	URB1	99	58.566	ENSRROG00000040237	URB1	99	58.785	Rhinopithecus_roxellana
ENSCPBG00000006454	URB1	99	59.612	ENSSBOG00000027672	URB1	99	59.397	Saimiri_boliviensis_boliviensis
ENSCPBG00000006454	URB1	99	61.431	ENSSHAG00000005140	URB1	100	61.257	Sarcophilus_harrisii
ENSCPBG00000006454	URB1	92	49.528	ENSSFOG00015000339	urb1	99	49.575	Scleropages_formosus
ENSCPBG00000006454	URB1	99	47.569	ENSSMAG00000003782	urb1	99	47.677	Scophthalmus_maximus
ENSCPBG00000006454	URB1	99	48.325	ENSSDUG00000012313	urb1	99	48.151	Seriola_dumerili
ENSCPBG00000006454	URB1	99	48.108	ENSSLDG00000023179	urb1	99	48.021	Seriola_lalandi_dorsalis
ENSCPBG00000006454	URB1	99	75.480	ENSSPUG00000012447	URB1	99	75.480	Sphenodon_punctatus
ENSCPBG00000006454	URB1	99	47.072	ENSSPAG00000006325	urb1	99	46.941	Stegastes_partitus
ENSCPBG00000006454	URB1	99	57.486	ENSSSCG00000032024	URB1	99	57.436	Sus_scrofa
ENSCPBG00000006454	URB1	73	73.393	ENSTGUG00000013442	URB1	100	73.306	Taeniopygia_guttata
ENSCPBG00000006454	URB1	99	45.951	ENSTRUG00000009372	urb1	99	45.951	Takifugu_rubripes
ENSCPBG00000006454	URB1	99	45.674	ENSTNIG00000016277	urb1	99	45.674	Tetraodon_nigroviridis
ENSCPBG00000006454	URB1	78	65.706	ENSTBEG00000010044	URB1	78	65.706	Tupaia_belangeri
ENSCPBG00000006454	URB1	91	63.185	ENSTTRG00000007712	URB1	92	63.055	Tursiops_truncatus
ENSCPBG00000006454	URB1	99	58.562	ENSUAMG00000012231	URB1	99	58.562	Ursus_americanus
ENSCPBG00000006454	URB1	90	60.763	ENSUMAG00000017419	URB1	97	60.486	Ursus_maritimus
ENSCPBG00000006454	URB1	68	71.918	ENSVPAG00000001164	URB1	68	71.918	Vicugna_pacos
ENSCPBG00000006454	URB1	99	59.285	ENSVVUG00000000551	URB1	99	59.198	Vulpes_vulpes
ENSCPBG00000006454	URB1	99	57.902	ENSXETG00000009895	urb1	99	57.945	Xenopus_tropicalis
ENSCPBG00000006454	URB1	99	43.459	ENSXCOG00000005500	urb1	98	48.281	Xiphophorus_couchianus
ENSCPBG00000006454	URB1	99	43.603	ENSXMAG00000007253	urb1	98	48.457	Xiphophorus_maculatus