EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000006519 (Gene tree)
Gene ID: 101952928
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 13033 bases
Position: chrKK088176.1:10507753-10520785
Accession: 11316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000008331	RRM_1	PF00076.22	2e-13	1	1
ENSCPBP00000008331	RRM_3	PF08777.11	7e-29	1	1
ENSCPBP00000008331	La	PF05383.17	2.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000010026	SSB-201	1683	-	ENSCPBP00000008331	409 (aa)	XP_005290483	UPI000388B692

Gene Model

Click here to download ENSCPBG00000006519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000006519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000006519	SSB	100	79.462	ENSG00000138385	SSB	100	84.167	Homo_sapiens
ENSCPBG00000006519	SSB	99	57.805	ENSAPOG00000003448	ssb	100	57.561	Acanthochromis_polyacanthus
ENSCPBG00000006519	SSB	100	76.415	ENSAMEG00000010507	SSB	100	75.472	Ailuropoda_melanoleuca
ENSCPBG00000006519	SSB	91	60.160	ENSACIG00000001738	ssb	95	60.109	Amphilophus_citrinellus
ENSCPBG00000006519	SSB	99	58.049	ENSAOCG00000020398	ssb	100	57.805	Amphiprion_ocellaris
ENSCPBG00000006519	SSB	99	58.293	ENSAPEG00000020395	ssb	100	58.049	Amphiprion_percula
ENSCPBG00000006519	SSB	99	61.220	ENSATEG00000016884	ssb	100	61.220	Anabas_testudineus
ENSCPBG00000006519	SSB	100	82.477	ENSAPLG00000006109	SSB	100	80.796	Anas_platyrhynchos
ENSCPBG00000006519	SSB	100	73.171	ENSACAG00000017008	SSB	99	73.171	Anolis_carolinensis
ENSCPBG00000006519	SSB	100	69.682	ENSANAG00000027195	-	100	68.949	Aotus_nancymaae
ENSCPBG00000006519	SSB	99	56.373	ENSACLG00000010798	ssb	100	56.127	Astatotilapia_calliptera
ENSCPBG00000006519	SSB	98	57.702	ENSAMXG00000012606	ssb	100	58.354	Astyanax_mexicanus
ENSCPBG00000006519	SSB	100	78.973	ENSBTAG00000008716	SSB	100	78.240	Bos_taurus
ENSCPBG00000006519	SSB	73	37.829	WBGene00016653	C44E4.4	77	38.235	Caenorhabditis_elegans
ENSCPBG00000006519	SSB	100	79.218	ENSCJAG00000045073	SSB	100	77.995	Callithrix_jacchus
ENSCPBG00000006519	SSB	100	79.268	ENSCAFG00000012418	SSB	100	78.537	Canis_familiaris
ENSCPBG00000006519	SSB	100	79.268	ENSCAFG00020002900	SSB	100	78.537	Canis_lupus_dingo
ENSCPBG00000006519	SSB	100	78.973	ENSCHIG00000022624	-	100	78.240	Capra_hircus
ENSCPBG00000006519	SSB	100	73.350	ENSCHIG00000022196	-	100	72.861	Capra_hircus
ENSCPBG00000006519	SSB	100	78.240	ENSTSYG00000000097	SSB	100	77.506	Carlito_syrichta
ENSCPBG00000006519	SSB	100	80.196	ENSCPOG00000003338	SSB	100	79.707	Cavia_porcellus
ENSCPBG00000006519	SSB	100	79.951	ENSCCAG00000035147	SSB	100	78.484	Cebus_capucinus
ENSCPBG00000006519	SSB	100	58.924	ENSCATG00000042909	-	100	57.457	Cercocebus_atys
ENSCPBG00000006519	SSB	72	78.912	ENSCATG00000036701	SSB	84	77.211	Cercocebus_atys
ENSCPBG00000006519	SSB	100	79.707	ENSCLAG00000015617	-	100	78.729	Chinchilla_lanigera
ENSCPBG00000006519	SSB	98	72.319	ENSCSAG00000018390	-	100	71.571	Chlorocebus_sabaeus
ENSCPBG00000006519	SSB	100	79.951	ENSCSAG00000015200	SSB	89	78.729	Chlorocebus_sabaeus
ENSCPBG00000006519	SSB	100	79.951	ENSCHOG00000007763	SSB	100	79.218	Choloepus_hoffmanni
ENSCPBG00000006519	SSB	100	79.951	ENSCANG00000027695	SSB	100	78.729	Colobus_angolensis_palliatus
ENSCPBG00000006519	SSB	96	62.087	ENSCANG00000028838	-	93	61.069	Colobus_angolensis_palliatus
ENSCPBG00000006519	SSB	100	67.971	ENSCANG00000033240	-	100	67.237	Colobus_angolensis_palliatus
ENSCPBG00000006519	SSB	100	68.841	ENSCGRG00001024831	Ssb	100	69.807	Cricetulus_griseus_chok1gshd
ENSCPBG00000006519	SSB	100	68.841	ENSCGRG00000005387	Ssb	100	69.807	Cricetulus_griseus_crigri
ENSCPBG00000006519	SSB	97	58.354	ENSCSEG00000011599	ssb	99	57.072	Cynoglossus_semilaevis
ENSCPBG00000006519	SSB	99	59.611	ENSCVAG00000021558	ssb	100	59.854	Cyprinodon_variegatus
ENSCPBG00000006519	SSB	99	61.463	ENSDARG00000029252	ssb	100	60.976	Danio_rerio
ENSCPBG00000006519	SSB	100	80.440	ENSDNOG00000013450	SSB	100	79.462	Dasypus_novemcinctus
ENSCPBG00000006519	SSB	100	73.012	ENSDORG00000005543	Ssb	100	70.602	Dipodomys_ordii
ENSCPBG00000006519	SSB	81	35.277	FBgn0011638	La	54	44.811	Drosophila_melanogaster
ENSCPBG00000006519	SSB	87	50.559	ENSEBUG00000001237	ssb	91	49.296	Eptatretus_burgeri
ENSCPBG00000006519	SSB	100	79.951	ENSEASG00005022835	SSB	100	79.218	Equus_asinus_asinus
ENSCPBG00000006519	SSB	100	80.196	ENSECAG00000018495	SSB	100	79.462	Equus_caballus
ENSCPBG00000006519	SSB	75	65.359	ENSEEUG00000008077	SSB	78	64.052	Erinaceus_europaeus
ENSCPBG00000006519	SSB	99	63.570	ENSELUG00000020929	ssb	100	63.325	Esox_lucius
ENSCPBG00000006519	SSB	100	78.780	ENSFCAG00000011601	SSB	100	78.293	Felis_catus
ENSCPBG00000006519	SSB	100	86.308	ENSFALG00000000930	SSB	100	86.064	Ficedula_albicollis
ENSCPBG00000006519	SSB	100	79.951	ENSFDAG00000000598	SSB	100	78.973	Fukomys_damarensis
ENSCPBG00000006519	SSB	72	59.000	ENSFHEG00000003268	ssb	92	59.060	Fundulus_heteroclitus
ENSCPBG00000006519	SSB	97	57.108	ENSGMOG00000002664	ssb	100	54.791	Gadus_morhua
ENSCPBG00000006519	SSB	100	85.819	ENSGALG00000009677	SSB	100	84.841	Gallus_gallus
ENSCPBG00000006519	SSB	99	58.537	ENSGAFG00000002749	ssb	100	58.780	Gambusia_affinis
ENSCPBG00000006519	SSB	98	57.457	ENSGACG00000005107	ssb	99	56.968	Gasterosteus_aculeatus
ENSCPBG00000006519	SSB	100	98.044	ENSGAGG00000007807	SSB	100	98.044	Gopherus_agassizii
ENSCPBG00000006519	SSB	100	65.770	ENSGGOG00000024891	-	100	64.792	Gorilla_gorilla
ENSCPBG00000006519	SSB	57	74.678	ENSGGOG00000023471	-	95	74.678	Gorilla_gorilla
ENSCPBG00000006519	SSB	99	56.373	ENSHBUG00000006584	ssb	100	56.127	Haplochromis_burtoni
ENSCPBG00000006519	SSB	100	78.606	ENSHGLG00000017580	-	100	76.442	Heterocephalus_glaber_female
ENSCPBG00000006519	SSB	100	73.479	ENSHGLG00000004478	-	100	72.263	Heterocephalus_glaber_female
ENSCPBG00000006519	SSB	100	71.149	ENSHGLG00000005832	-	100	70.171	Heterocephalus_glaber_female
ENSCPBG00000006519	SSB	100	78.606	ENSHGLG00100003084	-	100	76.442	Heterocephalus_glaber_male
ENSCPBG00000006519	SSB	100	69.193	ENSHGLG00100008767	-	100	69.193	Heterocephalus_glaber_male
ENSCPBG00000006519	SSB	98	57.357	ENSHCOG00000019011	ssb	99	57.357	Hippocampus_comes
ENSCPBG00000006519	SSB	99	61.165	ENSIPUG00000003681	SSB	100	60.922	Ictalurus_punctatus
ENSCPBG00000006519	SSB	100	79.218	ENSSTOG00000008416	SSB	100	78.484	Ictidomys_tridecemlineatus
ENSCPBG00000006519	SSB	100	67.213	ENSJJAG00000023158	-	100	65.574	Jaculus_jaculus
ENSCPBG00000006519	SSB	99	56.404	ENSJJAG00000016250	-	99	56.158	Jaculus_jaculus
ENSCPBG00000006519	SSB	99	59.512	ENSKMAG00000017317	ssb	99	58.809	Kryptolebias_marmoratus
ENSCPBG00000006519	SSB	99	58.780	ENSLBEG00000017345	ssb	100	59.268	Labrus_bergylta
ENSCPBG00000006519	SSB	99	69.118	ENSLACG00000014056	SSB	99	69.363	Latimeria_chalumnae
ENSCPBG00000006519	SSB	97	71.322	ENSLOCG00000007933	ssb	98	71.216	Lepisosteus_oculatus
ENSCPBG00000006519	SSB	74	60.265	ENSLAFG00000026721	-	99	60.265	Loxodonta_africana
ENSCPBG00000006519	SSB	100	66.748	ENSLAFG00000028909	-	100	66.504	Loxodonta_africana
ENSCPBG00000006519	SSB	100	74.353	ENSLAFG00000000867	-	100	73.239	Loxodonta_africana
ENSCPBG00000006519	SSB	100	79.951	ENSMFAG00000039066	SSB	100	78.729	Macaca_fascicularis
ENSCPBG00000006519	SSB	87	69.188	ENSMFAG00000041478	-	100	68.347	Macaca_fascicularis
ENSCPBG00000006519	SSB	100	79.951	ENSMMUG00000023051	SSB	100	78.729	Macaca_mulatta
ENSCPBG00000006519	SSB	99	55.528	ENSMMUG00000039889	-	100	54.545	Macaca_mulatta
ENSCPBG00000006519	SSB	100	67.726	ENSMMUG00000011724	-	97	64.891	Macaca_mulatta
ENSCPBG00000006519	SSB	87	69.188	ENSMNEG00000034698	-	100	68.347	Macaca_nemestrina
ENSCPBG00000006519	SSB	100	69.268	ENSMNEG00000028321	SSB	100	69.268	Macaca_nemestrina
ENSCPBG00000006519	SSB	100	79.951	ENSMLEG00000035717	SSB	100	78.729	Mandrillus_leucophaeus
ENSCPBG00000006519	SSB	100	56.479	ENSMLEG00000042644	-	100	54.279	Mandrillus_leucophaeus
ENSCPBG00000006519	SSB	99	60.244	ENSMAMG00000004800	ssb	100	59.512	Mastacembelus_armatus
ENSCPBG00000006519	SSB	99	56.373	ENSMZEG00005005749	ssb	100	56.127	Maylandia_zebra
ENSCPBG00000006519	SSB	100	85.819	ENSMGAG00000010328	SSB	100	85.330	Meleagris_gallopavo
ENSCPBG00000006519	SSB	98	73.067	ENSMICG00000033304	-	93	77.198	Microcebus_murinus
ENSCPBG00000006519	SSB	99	80.590	ENSMICG00000028252	-	99	80.344	Microcebus_murinus
ENSCPBG00000006519	SSB	100	75.418	ENSMODG00000008227	-	100	75.418	Monodelphis_domestica
ENSCPBG00000006519	SSB	100	64.792	ENSMODG00000019271	-	100	62.592	Monodelphis_domestica
ENSCPBG00000006519	SSB	100	62.836	ENSMODG00000007027	-	100	62.103	Monodelphis_domestica
ENSCPBG00000006519	SSB	89	58.808	ENSMALG00000008045	ssb	88	61.853	Monopterus_albus
ENSCPBG00000006519	SSB	100	68.000	MGP_CAROLIEiJ_G0023629	-	100	78.804	Mus_caroli
ENSCPBG00000006519	SSB	100	67.294	ENSMUSG00000068882	Ssb	100	78.804	Mus_musculus
ENSCPBG00000006519	SSB	100	67.294	MGP_PahariEiJ_G0025081	-	100	78.261	Mus_pahari
ENSCPBG00000006519	SSB	100	67.294	MGP_SPRETEiJ_G0024551	Ssb	100	78.804	Mus_spretus
ENSCPBG00000006519	SSB	100	79.462	ENSMPUG00000000785	SSB	100	78.973	Mustela_putorius_furo
ENSCPBG00000006519	SSB	100	75.236	ENSMLUG00000016316	SSB	100	74.292	Myotis_lucifugus
ENSCPBG00000006519	SSB	99	56.373	ENSNBRG00000012661	ssb	100	55.882	Neolamprologus_brichardi
ENSCPBG00000006519	SSB	100	57.946	ENSNLEG00000028754	-	100	56.585	Nomascus_leucogenys
ENSCPBG00000006519	SSB	100	79.951	ENSNLEG00000004958	SSB	100	78.729	Nomascus_leucogenys
ENSCPBG00000006519	SSB	61	84.677	ENSMEUG00000001650	-	100	84.677	Notamacropus_eugenii
ENSCPBG00000006519	SSB	52	83.871	ENSOPRG00000008475	-	100	60.544	Ochotona_princeps
ENSCPBG00000006519	SSB	93	76.378	ENSODEG00000004202	-	99	75.591	Octodon_degus
ENSCPBG00000006519	SSB	99	57.108	ENSONIG00000008776	ssb	100	55.637	Oreochromis_niloticus
ENSCPBG00000006519	SSB	100	81.663	ENSOANG00000008543	SSB	100	80.685	Ornithorhynchus_anatinus
ENSCPBG00000006519	SSB	100	79.218	ENSOCUG00000010396	SSB	100	78.484	Oryctolagus_cuniculus
ENSCPBG00000006519	SSB	99	59.268	ENSORLG00000017208	ssb	100	59.268	Oryzias_latipes
ENSCPBG00000006519	SSB	99	59.024	ENSORLG00020022574	ssb	100	59.268	Oryzias_latipes_hni
ENSCPBG00000006519	SSB	99	59.268	ENSORLG00015016592	ssb	100	58.780	Oryzias_latipes_hsok
ENSCPBG00000006519	SSB	99	59.902	ENSOMEG00000003193	ssb	100	60.636	Oryzias_melastigma
ENSCPBG00000006519	SSB	100	74.413	ENSOGAG00000029768	SSB	100	72.066	Otolemur_garnettii
ENSCPBG00000006519	SSB	100	79.218	ENSOARG00000002906	SSB	100	78.484	Ovis_aries
ENSCPBG00000006519	SSB	100	64.548	ENSPPAG00000032427	-	100	74.419	Pan_paniscus
ENSCPBG00000006519	SSB	89	66.022	ENSPPAG00000006189	-	93	60.656	Pan_paniscus
ENSCPBG00000006519	SSB	100	79.462	ENSPPAG00000042673	SSB	100	79.462	Pan_paniscus
ENSCPBG00000006519	SSB	100	78.780	ENSPPRG00000006599	SSB	100	78.293	Panthera_pardus
ENSCPBG00000006519	SSB	100	78.780	ENSPTIG00000011021	SSB	97	78.293	Panthera_tigris_altaica
ENSCPBG00000006519	SSB	100	79.462	ENSPTRG00000012620	SSB	100	79.462	Pan_troglodytes
ENSCPBG00000006519	SSB	100	61.614	ENSPTRG00000042880	-	100	58.394	Pan_troglodytes
ENSCPBG00000006519	SSB	98	55.335	ENSPANG00000031877	-	95	53.350	Papio_anubis
ENSCPBG00000006519	SSB	100	57.946	ENSPANG00000034126	-	100	56.311	Papio_anubis
ENSCPBG00000006519	SSB	100	79.951	ENSPANG00000007440	SSB	100	78.729	Papio_anubis
ENSCPBG00000006519	SSB	99	65.770	ENSPKIG00000019325	ssb	99	65.770	Paramormyrops_kingsleyae
ENSCPBG00000006519	SSB	100	93.643	ENSPSIG00000002265	SSB	93	93.643	Pelodiscus_sinensis
ENSCPBG00000006519	SSB	86	57.143	ENSPMGG00000020075	ssb	90	57.637	Periophthalmus_magnuspinnatus
ENSCPBG00000006519	SSB	99	46.774	ENSPMAG00000002982	ssb	100	45.392	Petromyzon_marinus
ENSCPBG00000006519	SSB	100	78.049	ENSPCIG00000028591	-	100	78.537	Phascolarctos_cinereus
ENSCPBG00000006519	SSB	99	59.512	ENSPFOG00000009650	ssb	100	59.024	Poecilia_formosa
ENSCPBG00000006519	SSB	99	59.268	ENSPLAG00000020498	ssb	100	59.024	Poecilia_latipinna
ENSCPBG00000006519	SSB	99	59.268	ENSPMEG00000001051	ssb	100	58.780	Poecilia_mexicana
ENSCPBG00000006519	SSB	91	60.789	ENSPREG00000003708	ssb	96	61.141	Poecilia_reticulata
ENSCPBG00000006519	SSB	100	79.951	ENSPPYG00000012919	SSB	100	78.729	Pongo_abelii
ENSCPBG00000006519	SSB	95	77.003	ENSPCAG00000010276	SSB	100	75.969	Procavia_capensis
ENSCPBG00000006519	SSB	100	70.905	ENSPCOG00000023189	-	100	69.682	Propithecus_coquereli
ENSCPBG00000006519	SSB	100	77.017	ENSPCOG00000015741	-	100	75.795	Propithecus_coquereli
ENSCPBG00000006519	SSB	86	81.714	ENSPVAG00000006615	SSB	97	82.456	Pteropus_vampyrus
ENSCPBG00000006519	SSB	99	56.373	ENSPNYG00000006444	ssb	100	56.127	Pundamilia_nyererei
ENSCPBG00000006519	SSB	98	60.345	ENSPNAG00000011708	ssb	100	60.488	Pygocentrus_nattereri
ENSCPBG00000006519	SSB	100	66.824	ENSRNOG00000007998	Ssb	100	65.647	Rattus_norvegicus
ENSCPBG00000006519	SSB	100	67.233	ENSRNOG00000011606	AABR07061825.1	100	66.262	Rattus_norvegicus
ENSCPBG00000006519	SSB	100	67.391	ENSRBIG00000041972	SSB	88	82.609	Rhinopithecus_bieti
ENSCPBG00000006519	SSB	89	73.497	ENSRBIG00000041608	-	98	70.219	Rhinopithecus_bieti
ENSCPBG00000006519	SSB	100	57.317	ENSRBIG00000029918	-	100	56.829	Rhinopithecus_bieti
ENSCPBG00000006519	SSB	94	66.841	ENSRBIG00000041232	-	98	66.057	Rhinopithecus_bieti
ENSCPBG00000006519	SSB	98	67.500	ENSRROG00000031684	-	100	66.750	Rhinopithecus_roxellana
ENSCPBG00000006519	SSB	100	79.951	ENSRROG00000040346	SSB	100	78.729	Rhinopithecus_roxellana
ENSCPBG00000006519	SSB	100	65.610	ENSRROG00000007149	-	100	64.634	Rhinopithecus_roxellana
ENSCPBG00000006519	SSB	89	77.049	ENSRROG00000034102	-	97	71.250	Rhinopithecus_roxellana
ENSCPBG00000006519	SSB	100	79.707	ENSSBOG00000027204	SSB	100	78.484	Saimiri_boliviensis_boliviensis
ENSCPBG00000006519	SSB	100	78.049	ENSSHAG00000018062	SSB	100	79.024	Sarcophilus_harrisii
ENSCPBG00000006519	SSB	99	67.070	ENSSFOG00015000550	ssb	100	67.312	Scleropages_formosus
ENSCPBG00000006519	SSB	98	55.831	ENSSMAG00000013885	ssb	98	61.247	Scophthalmus_maximus
ENSCPBG00000006519	SSB	99	60.732	ENSSDUG00000020117	ssb	100	60.000	Seriola_dumerili
ENSCPBG00000006519	SSB	99	58.231	ENSSLDG00000002525	ssb	100	57.248	Seriola_lalandi_dorsalis
ENSCPBG00000006519	SSB	95	73.643	ENSSARG00000007747	SSB	100	73.385	Sorex_araneus
ENSCPBG00000006519	SSB	100	87.286	ENSSPUG00000012112	SSB	100	87.042	Sphenodon_punctatus
ENSCPBG00000006519	SSB	98	57.635	ENSSPAG00000005696	ssb	100	57.561	Stegastes_partitus
ENSCPBG00000006519	SSB	89	70.765	ENSSSCG00000015938	SSB	91	70.055	Sus_scrofa
ENSCPBG00000006519	SSB	100	85.819	ENSTGUG00000007942	SSB	100	85.819	Taeniopygia_guttata
ENSCPBG00000006519	SSB	99	59.314	ENSTRUG00000017839	ssb	100	57.421	Takifugu_rubripes
ENSCPBG00000006519	SSB	89	61.413	ENSTNIG00000000915	ssb	99	59.786	Tetraodon_nigroviridis
ENSCPBG00000006519	SSB	83	82.609	ENSTBEG00000009056	SSB	82	82.609	Tupaia_belangeri
ENSCPBG00000006519	SSB	100	78.780	ENSTTRG00000002152	SSB	100	77.073	Tursiops_truncatus
ENSCPBG00000006519	SSB	92	80.952	ENSUAMG00000027833	SSB	96	82.418	Ursus_americanus
ENSCPBG00000006519	SSB	100	79.512	ENSUMAG00000013907	SSB	100	78.780	Ursus_maritimus
ENSCPBG00000006519	SSB	100	79.707	ENSVPAG00000007183	SSB	100	78.973	Vicugna_pacos
ENSCPBG00000006519	SSB	100	79.268	ENSVVUG00000016573	SSB	78	78.537	Vulpes_vulpes
ENSCPBG00000006519	SSB	100	60.748	ENSXETG00000025402	ssb	100	60.514	Xenopus_tropicalis
ENSCPBG00000006519	SSB	91	58.839	ENSXCOG00000019109	ssb	93	64.844	Xiphophorus_couchianus
ENSCPBG00000006519	SSB	99	59.322	ENSXMAG00000004888	ssb	100	59.024	Xiphophorus_maculatus