EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000006680 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 4466 bases
Position: chrKK083622.1:35567-40032
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000008590	MMR_HSR1	PF01926.23	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000010310	-	580	-	ENSCPBP00000008590	193 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000006680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000006680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000006680	-	94	51.648	ENSCPBG00000021470	-	61	51.648
ENSCPBG00000006680	-	96	38.919	ENSCPBG00000013137	-	57	38.919
ENSCPBG00000006680	-	97	55.615	ENSCPBG00000021464	-	56	55.615
ENSCPBG00000006680	-	100	72.021	ENSCPBG00000021939	-	80	56.970

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000006680	-	96	52.973	ENSG00000124449	IRGC	67	52.973	Homo_sapiens
ENSCPBG00000006680	-	97	53.368	ENSAMEG00000004232	IRGC	56	53.368	Ailuropoda_melanoleuca
ENSCPBG00000006680	-	90	53.179	ENSACIG00000023724	-	70	53.714	Amphilophus_citrinellus
ENSCPBG00000006680	-	96	54.375	ENSACIG00000010992	-	73	53.714	Amphilophus_citrinellus
ENSCPBG00000006680	-	96	47.568	ENSACIG00000014652	-	71	47.568	Amphilophus_citrinellus
ENSCPBG00000006680	-	96	48.649	ENSACIG00000000621	-	69	48.649	Amphilophus_citrinellus
ENSCPBG00000006680	-	91	53.143	ENSACIG00000008165	-	68	53.143	Amphilophus_citrinellus
ENSCPBG00000006680	-	91	55.429	ENSAOCG00000012267	-	64	55.429	Amphiprion_ocellaris
ENSCPBG00000006680	-	86	53.012	ENSAPEG00000002648	-	89	53.012	Amphiprion_percula
ENSCPBG00000006680	-	94	49.451	ENSATEG00000011665	-	66	45.930	Anabas_testudineus
ENSCPBG00000006680	-	91	54.857	ENSATEG00000011733	-	74	54.857	Anabas_testudineus
ENSCPBG00000006680	-	91	55.429	ENSATEG00000011805	-	64	55.429	Anabas_testudineus
ENSCPBG00000006680	-	98	49.495	ENSACLG00000017575	-	69	49.495	Astatotilapia_calliptera
ENSCPBG00000006680	-	98	50.265	ENSACLG00000026716	-	63	50.265	Astatotilapia_calliptera
ENSCPBG00000006680	-	91	52.000	ENSACLG00000026694	-	71	51.429	Astatotilapia_calliptera
ENSCPBG00000006680	-	96	50.811	ENSACLG00000017807	-	98	50.811	Astatotilapia_calliptera
ENSCPBG00000006680	-	91	52.000	ENSACLG00000008069	-	72	52.000	Astatotilapia_calliptera
ENSCPBG00000006680	-	97	47.594	ENSAMXG00000043797	-	75	47.594	Astyanax_mexicanus
ENSCPBG00000006680	-	96	48.663	ENSAMXG00000031909	-	50	49.198	Astyanax_mexicanus
ENSCPBG00000006680	-	90	48.750	ENSAMXG00000001283	-	65	48.750	Astyanax_mexicanus
ENSCPBG00000006680	-	97	54.422	ENSCAFG00000004727	IRGC	50	54.422	Canis_familiaris
ENSCPBG00000006680	-	99	40.838	ENSCAFG00020002229	-	50	40.838	Canis_lupus_dingo
ENSCPBG00000006680	-	92	48.588	ENSCHIG00000013605	-	50	48.588	Capra_hircus
ENSCPBG00000006680	-	89	54.386	ENSCHOG00000005921	-	68	54.386	Choloepus_hoffmanni
ENSCPBG00000006680	-	98	51.832	ENSCVAG00000000472	-	72	51.832	Cyprinodon_variegatus
ENSCPBG00000006680	-	91	47.159	ENSCVAG00000011039	-	59	47.159	Cyprinodon_variegatus
ENSCPBG00000006680	-	97	51.596	ENSCVAG00000011026	-	70	51.337	Cyprinodon_variegatus
ENSCPBG00000006680	-	87	46.429	ENSCVAG00000018094	-	71	46.429	Cyprinodon_variegatus
ENSCPBG00000006680	-	91	46.023	ENSFHEG00000008542	-	73	46.023	Fundulus_heteroclitus
ENSCPBG00000006680	-	98	52.551	ENSGMOG00000007043	-	52	52.551	Gadus_morhua
ENSCPBG00000006680	-	100	63.235	ENSGMOG00000000661	-	73	59.884	Gadus_morhua
ENSCPBG00000006680	-	92	53.107	ENSGMOG00000014685	-	59	53.107	Gadus_morhua
ENSCPBG00000006680	-	91	57.955	ENSGAGG00000011615	-	77	57.955	Gopherus_agassizii
ENSCPBG00000006680	-	94	52.198	ENSGAGG00000002093	-	81	52.198	Gopherus_agassizii
ENSCPBG00000006680	-	100	49.744	ENSHBUG00000008052	-	62	55.625	Haplochromis_burtoni
ENSCPBG00000006680	-	97	51.596	ENSHBUG00000007885	-	68	51.596	Haplochromis_burtoni
ENSCPBG00000006680	-	91	53.143	ENSHBUG00000020228	-	69	53.143	Haplochromis_burtoni
ENSCPBG00000006680	-	63	62.295	ENSHBUG00000004969	-	72	62.295	Haplochromis_burtoni
ENSCPBG00000006680	-	99	51.832	ENSHBUG00000020009	-	50	51.832	Haplochromis_burtoni
ENSCPBG00000006680	-	90	54.598	ENSHBUG00000023667	-	68	54.598	Haplochromis_burtoni
ENSCPBG00000006680	-	82	55.063	ENSHBUG00000016080	-	74	55.063	Haplochromis_burtoni
ENSCPBG00000006680	-	87	45.625	ENSIPUG00000012630	-	63	45.625	Ictalurus_punctatus
ENSCPBG00000006680	-	94	49.143	ENSJJAG00000023378	-	68	56.044	Jaculus_jaculus
ENSCPBG00000006680	-	98	50.262	ENSLBEG00000014554	-	85	50.262	Labrus_bergylta
ENSCPBG00000006680	-	83	53.416	ENSLBEG00000014225	-	89	53.416	Labrus_bergylta
ENSCPBG00000006680	-	90	55.172	ENSLBEG00000005157	-	63	55.172	Labrus_bergylta
ENSCPBG00000006680	-	90	53.448	ENSLBEG00000005277	-	69	53.448	Labrus_bergylta
ENSCPBG00000006680	-	96	51.075	ENSLBEG00000024117	-	69	52.571	Labrus_bergylta
ENSCPBG00000006680	-	93	50.279	ENSLBEG00000014433	-	69	51.429	Labrus_bergylta
ENSCPBG00000006680	-	86	48.193	ENSLACG00000006215	-	56	48.193	Latimeria_chalumnae
ENSCPBG00000006680	-	97	63.102	ENSLACG00000016344	-	51	63.102	Latimeria_chalumnae
ENSCPBG00000006680	-	92	57.627	ENSLACG00000005910	-	54	57.627	Latimeria_chalumnae
ENSCPBG00000006680	-	96	55.676	ENSLACG00000016534	-	52	55.676	Latimeria_chalumnae
ENSCPBG00000006680	-	91	46.857	ENSMZEG00005027737	-	65	46.857	Maylandia_zebra
ENSCPBG00000006680	-	90	46.591	ENSMZEG00005027732	-	50	50.568	Maylandia_zebra
ENSCPBG00000006680	-	81	48.077	ENSMZEG00005027736	-	91	48.077	Maylandia_zebra
ENSCPBG00000006680	-	91	52.571	ENSMZEG00005027730	-	68	52.571	Maylandia_zebra
ENSCPBG00000006680	-	90	56.897	ENSMZEG00005013284	-	68	56.897	Maylandia_zebra
ENSCPBG00000006680	-	91	52.000	ENSMZEG00005027717	-	65	52.000	Maylandia_zebra
ENSCPBG00000006680	-	87	45.509	ENSMOCG00000002764	-	80	45.509	Microtus_ochrogaster
ENSCPBG00000006680	-	91	46.286	ENSMMOG00000018247	irgf3	61	46.286	Mola_mola
ENSCPBG00000006680	-	97	40.107	MGP_CAROLIEiJ_G0016256	Irgm1	63	40.107	Mus_caroli
ENSCPBG00000006680	-	97	46.524	MGP_CAROLIEiJ_G0022303	Iigp1	50	46.524	Mus_caroli
ENSCPBG00000006680	-	60	46.957	MGP_CAROLIEiJ_G0022304	-	71	46.957	Mus_caroli
ENSCPBG00000006680	-	96	49.730	ENSMUSG00000078920	Ifi47	74	53.425	Mus_musculus
ENSCPBG00000006680	-	93	49.162	ENSMUSG00000078922	Tgtp1	72	55.789	Mus_musculus
ENSCPBG00000006680	-	97	47.059	ENSMUSG00000069892	9930111J21Rik2	66	46.341	Mus_musculus
ENSCPBG00000006680	-	97	47.594	ENSMUSG00000069893	9930111J21Rik1	66	46.341	Mus_musculus
ENSCPBG00000006680	-	93	49.162	MGP_PahariEiJ_G0017404	-	72	54.255	Mus_pahari
ENSCPBG00000006680	-	97	41.711	MGP_PahariEiJ_G0017392	Irgm1	63	41.711	Mus_pahari
ENSCPBG00000006680	-	97	44.920	MGP_SPRETEiJ_G0017101	-	52	44.920	Mus_spretus
ENSCPBG00000006680	-	97	41.711	MGP_SPRETEiJ_G0017097	Irgm1	63	41.711	Mus_spretus
ENSCPBG00000006680	-	97	44.920	MGP_SPRETEiJ_G0017098	-	52	44.920	Mus_spretus
ENSCPBG00000006680	-	97	41.489	MGP_SPRETEiJ_G0017099	9930111J21Rik2	74	44.444	Mus_spretus
ENSCPBG00000006680	-	97	44.920	MGP_SPRETEiJ_G0017100	-	52	44.920	Mus_spretus
ENSCPBG00000006680	-	99	53.514	ENSMPUG00000006607	IRGC	51	53.514	Mustela_putorius_furo
ENSCPBG00000006680	-	96	53.846	ENSMLUG00000009743	-	52	53.846	Myotis_lucifugus
ENSCPBG00000006680	-	85	52.727	ENSNBRG00000001731	-	80	52.727	Neolamprologus_brichardi
ENSCPBG00000006680	-	92	50.562	ENSNBRG00000012048	-	95	50.562	Neolamprologus_brichardi
ENSCPBG00000006680	-	91	56.571	ENSNBRG00000007654	-	70	56.571	Neolamprologus_brichardi
ENSCPBG00000006680	-	93	49.162	ENSNBRG00000022072	-	71	49.162	Neolamprologus_brichardi
ENSCPBG00000006680	-	84	56.209	ENSNBRG00000008018	-	73	56.209	Neolamprologus_brichardi
ENSCPBG00000006680	-	91	57.143	ENSNBRG00000007806	-	65	57.143	Neolamprologus_brichardi
ENSCPBG00000006680	-	89	56.725	ENSNBRG00000007782	-	78	56.725	Neolamprologus_brichardi
ENSCPBG00000006680	-	83	55.901	ENSNBRG00000022060	-	64	55.901	Neolamprologus_brichardi
ENSCPBG00000006680	-	99	52.308	ENSNBRG00000007712	-	69	52.308	Neolamprologus_brichardi
ENSCPBG00000006680	-	99	53.927	ENSNBRG00000007953	-	50	53.723	Neolamprologus_brichardi
ENSCPBG00000006680	-	97	52.406	ENSNBRG00000000314	-	77	52.406	Neolamprologus_brichardi
ENSCPBG00000006680	-	79	56.209	ENSNBRG00000008076	-	82	56.209	Neolamprologus_brichardi
ENSCPBG00000006680	-	96	52.432	ENSOPRG00000004262	IRGC	61	52.432	Ochotona_princeps
ENSCPBG00000006680	-	97	54.545	ENSOANG00000001820	-	63	54.545	Ornithorhynchus_anatinus
ENSCPBG00000006680	-	92	51.412	ENSPKIG00000001724	IRGC	65	53.049	Paramormyrops_kingsleyae
ENSCPBG00000006680	-	92	53.672	ENSPSIG00000008699	-	61	53.672	Pelodiscus_sinensis
ENSCPBG00000006680	-	97	70.588	ENSPSIG00000009029	-	50	70.588	Pelodiscus_sinensis
ENSCPBG00000006680	-	100	52.577	ENSPMGG00000022164	-	75	53.763	Periophthalmus_magnuspinnatus
ENSCPBG00000006680	-	97	49.198	ENSPMGG00000023020	-	75	49.198	Periophthalmus_magnuspinnatus
ENSCPBG00000006680	-	98	49.206	ENSPMGG00000023541	-	74	48.148	Periophthalmus_magnuspinnatus
ENSCPBG00000006680	-	97	49.733	ENSPEMG00000015679	-	61	46.053	Peromyscus_maniculatus_bairdii
ENSCPBG00000006680	-	91	54.857	ENSPLAG00000016196	-	71	54.545	Poecilia_latipinna
ENSCPBG00000006680	-	91	46.286	ENSPLAG00000023485	-	56	44.571	Poecilia_latipinna
ENSCPBG00000006680	-	98	50.785	ENSPMEG00000011302	-	70	53.143	Poecilia_mexicana
ENSCPBG00000006680	-	92	44.633	ENSPREG00000004310	-	79	44.311	Poecilia_reticulata
ENSCPBG00000006680	-	98	55.901	ENSPNYG00000023728	-	74	55.901	Pundamilia_nyererei
ENSCPBG00000006680	-	95	54.645	ENSPNYG00000007188	-	73	54.645	Pundamilia_nyererei
ENSCPBG00000006680	-	91	54.545	ENSPNYG00000023912	-	67	54.545	Pundamilia_nyererei
ENSCPBG00000006680	-	82	55.975	ENSPNYG00000021714	-	58	55.975	Pundamilia_nyererei
ENSCPBG00000006680	-	91	52.000	ENSPNYG00000004835	-	68	52.000	Pundamilia_nyererei
ENSCPBG00000006680	-	95	53.804	ENSPNYG00000021508	-	67	53.804	Pundamilia_nyererei
ENSCPBG00000006680	-	99	48.705	ENSPNYG00000023680	-	99	48.705	Pundamilia_nyererei
ENSCPBG00000006680	-	82	46.541	ENSPNYG00000023816	-	90	45.833	Pundamilia_nyererei
ENSCPBG00000006680	-	97	43.850	ENSPNAG00000029024	-	61	47.239	Pygocentrus_nattereri
ENSCPBG00000006680	-	97	49.686	ENSPNAG00000000207	-	66	59.483	Pygocentrus_nattereri
ENSCPBG00000006680	-	90	46.875	ENSPNAG00000023934	-	65	46.875	Pygocentrus_nattereri
ENSCPBG00000006680	-	97	49.733	ENSRNOG00000048302	LOC100910979	50	49.733	Rattus_norvegicus
ENSCPBG00000006680	-	61	52.500	ENSSLDG00000006807	-	86	52.500	Seriola_lalandi_dorsalis
ENSCPBG00000006680	-	91	46.857	ENSSLDG00000014712	-	71	46.857	Seriola_lalandi_dorsalis
ENSCPBG00000006680	-	95	38.043	ENSSPUG00000015934	-	55	38.043	Sphenodon_punctatus
ENSCPBG00000006680	-	97	51.596	ENSSPUG00000015920	-	58	51.596	Sphenodon_punctatus
ENSCPBG00000006680	-	91	57.714	ENSSPAG00000006926	-	67	57.714	Stegastes_partitus
ENSCPBG00000006680	-	83	57.764	ENSSPAG00000007371	-	80	57.764	Stegastes_partitus
ENSCPBG00000006680	-	91	54.857	ENSSPAG00000001416	-	73	54.857	Stegastes_partitus
ENSCPBG00000006680	-	97	57.143	ENSTRUG00000005821	-	70	57.143	Takifugu_rubripes
ENSCPBG00000006680	-	84	59.877	ENSTRUG00000001895	-	76	59.877	Takifugu_rubripes
ENSCPBG00000006680	-	96	56.322	ENSTNIG00000000628	-	50	56.000	Tetraodon_nigroviridis
ENSCPBG00000006680	-	91	54.286	ENSTNIG00000000695	-	98	54.286	Tetraodon_nigroviridis
ENSCPBG00000006680	-	96	48.128	ENSTNIG00000000212	-	52	48.128	Tetraodon_nigroviridis