EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000006753 (Gene tree)
Gene ID: 101949040
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 79902 bases
Position: chrKK083053.1:482335-562236
Accession: 2485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000008693	Suf	PF05843.14	8.1e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000010425	CSTF3-201	2965	-	ENSCPBP00000008693	718 (aa)	XP_005291583	UPI000388E06F

Gene Model

Click here to download ENSCPBG00000006753's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000006753's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000006753	CSTF3	100	97.354	ENSG00000176102	CSTF3	100	97.354	Homo_sapiens
ENSCPBG00000006753	CSTF3	100	91.504	ENSAPOG00000014054	cstf3	100	91.504	Acanthochromis_polyacanthus
ENSCPBG00000006753	CSTF3	99	98.025	ENSAMEG00000007187	CSTF3	98	98.025	Ailuropoda_melanoleuca
ENSCPBG00000006753	CSTF3	87	86.400	ENSACIG00000005539	cstf3	100	86.400	Amphilophus_citrinellus
ENSCPBG00000006753	CSTF3	100	91.365	ENSAOCG00000010930	cstf3	100	91.365	Amphiprion_ocellaris
ENSCPBG00000006753	CSTF3	100	91.365	ENSAPEG00000007903	cstf3	100	91.365	Amphiprion_percula
ENSCPBG00000006753	CSTF3	100	91.365	ENSATEG00000000190	cstf3	100	91.365	Anabas_testudineus
ENSCPBG00000006753	CSTF3	99	99.011	ENSAPLG00000007217	CSTF3	100	99.011	Anas_platyrhynchos
ENSCPBG00000006753	CSTF3	100	96.797	ENSACAG00000002823	CSTF3	100	96.797	Anolis_carolinensis
ENSCPBG00000006753	CSTF3	100	97.354	ENSANAG00000020699	CSTF3	100	97.600	Aotus_nancymaae
ENSCPBG00000006753	CSTF3	98	92.057	ENSACLG00000007820	cstf3	100	91.365	Astatotilapia_calliptera
ENSCPBG00000006753	CSTF3	100	90.682	ENSAMXG00000014198	cstf3	100	90.960	Astyanax_mexicanus
ENSCPBG00000006753	CSTF3	100	97.354	ENSBTAG00000008617	CSTF3	100	97.774	Bos_taurus
ENSCPBG00000006753	CSTF3	97	49.178	WBGene00006307	suf-1	99	49.178	Caenorhabditis_elegans
ENSCPBG00000006753	CSTF3	100	97.354	ENSCJAG00000005533	CSTF3	100	97.600	Callithrix_jacchus
ENSCPBG00000006753	CSTF3	100	97.354	ENSCAFG00000007264	CSTF3	100	97.354	Canis_familiaris
ENSCPBG00000006753	CSTF3	99	97.884	ENSCAFG00020002715	CSTF3	99	97.884	Canis_lupus_dingo
ENSCPBG00000006753	CSTF3	98	96.302	ENSCHIG00000016418	CSTF3	100	97.600	Capra_hircus
ENSCPBG00000006753	CSTF3	99	97.602	ENSTSYG00000000451	CSTF3	99	99.778	Carlito_syrichta
ENSCPBG00000006753	CSTF3	83	91.706	ENSCAPG00000010958	CSTF3	98	91.706	Cavia_aperea
ENSCPBG00000006753	CSTF3	100	97.493	ENSCPOG00000005545	CSTF3	100	97.616	Cavia_porcellus
ENSCPBG00000006753	CSTF3	100	97.354	ENSCCAG00000024790	CSTF3	100	97.600	Cebus_capucinus
ENSCPBG00000006753	CSTF3	100	97.354	ENSCATG00000007080	CSTF3	100	97.600	Cercocebus_atys
ENSCPBG00000006753	CSTF3	100	97.354	ENSCLAG00000016179	CSTF3	100	97.354	Chinchilla_lanigera
ENSCPBG00000006753	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSCPBG00000006753	CSTF3	98	62.238	ENSCING00000006401	-	98	62.238	Ciona_intestinalis
ENSCPBG00000006753	CSTF3	98	62.204	ENSCSAVG00000004851	-	100	62.204	Ciona_savignyi
ENSCPBG00000006753	CSTF3	100	97.354	ENSCANG00000035468	CSTF3	100	97.600	Colobus_angolensis_palliatus
ENSCPBG00000006753	CSTF3	100	97.214	ENSCGRG00001014773	Cstf3	100	97.214	Cricetulus_griseus_chok1gshd
ENSCPBG00000006753	CSTF3	100	97.214	ENSCGRG00000004142	Cstf3	100	97.214	Cricetulus_griseus_crigri
ENSCPBG00000006753	CSTF3	100	91.504	ENSCSEG00000014283	cstf3	100	91.504	Cynoglossus_semilaevis
ENSCPBG00000006753	CSTF3	100	90.390	ENSCVAG00000019739	cstf3	100	90.390	Cyprinodon_variegatus
ENSCPBG00000006753	CSTF3	99	92.113	ENSDARG00000018904	cstf3	99	92.113	Danio_rerio
ENSCPBG00000006753	CSTF3	99	97.743	ENSDNOG00000007366	CSTF3	99	97.743	Dasypus_novemcinctus
ENSCPBG00000006753	CSTF3	99	89.986	ENSDORG00000005898	Cstf3	99	89.986	Dipodomys_ordii
ENSCPBG00000006753	CSTF3	98	57.320	FBgn0003559	su(f)	98	57.320	Drosophila_melanogaster
ENSCPBG00000006753	CSTF3	89	92.523	ENSETEG00000017097	CSTF3	90	92.523	Echinops_telfairi
ENSCPBG00000006753	CSTF3	84	73.884	ENSEBUG00000015459	cstf3	96	73.884	Eptatretus_burgeri
ENSCPBG00000006753	CSTF3	99	96.615	ENSEASG00005019884	CSTF3	100	98.000	Equus_asinus_asinus
ENSCPBG00000006753	CSTF3	99	96.615	ENSECAG00000023338	CSTF3	100	98.000	Equus_caballus
ENSCPBG00000006753	CSTF3	100	92.061	ENSEEUG00000015167	CSTF3	100	92.061	Erinaceus_europaeus
ENSCPBG00000006753	CSTF3	100	89.972	ENSELUG00000023393	cstf3	100	89.972	Esox_lucius
ENSCPBG00000006753	CSTF3	100	97.354	ENSFCAG00000030711	CSTF3	100	97.354	Felis_catus
ENSCPBG00000006753	CSTF3	93	98.799	ENSFALG00000010764	CSTF3	100	97.542	Ficedula_albicollis
ENSCPBG00000006753	CSTF3	100	97.354	ENSFDAG00000012082	CSTF3	100	97.354	Fukomys_damarensis
ENSCPBG00000006753	CSTF3	100	90.390	ENSFHEG00000020623	cstf3	100	90.390	Fundulus_heteroclitus
ENSCPBG00000006753	CSTF3	100	89.708	ENSGMOG00000012275	cstf3	100	89.708	Gadus_morhua
ENSCPBG00000006753	CSTF3	100	98.189	ENSGALG00000011685	CSTF3	100	98.189	Gallus_gallus
ENSCPBG00000006753	CSTF3	100	90.669	ENSGAFG00000002181	cstf3	100	90.669	Gambusia_affinis
ENSCPBG00000006753	CSTF3	100	90.669	ENSGACG00000015997	cstf3	100	90.669	Gasterosteus_aculeatus
ENSCPBG00000006753	CSTF3	100	99.721	ENSGAGG00000006200	CSTF3	100	99.721	Gopherus_agassizii
ENSCPBG00000006753	CSTF3	99	91.961	ENSGGOG00000026591	CSTF3	99	91.961	Gorilla_gorilla
ENSCPBG00000006753	CSTF3	98	92.057	ENSHBUG00000016656	cstf3	100	91.365	Haplochromis_burtoni
ENSCPBG00000006753	CSTF3	100	97.354	ENSHGLG00000017834	CSTF3	100	97.354	Heterocephalus_glaber_female
ENSCPBG00000006753	CSTF3	100	97.354	ENSHGLG00100018042	CSTF3	100	97.354	Heterocephalus_glaber_male
ENSCPBG00000006753	CSTF3	100	88.579	ENSHCOG00000015218	cstf3	100	88.579	Hippocampus_comes
ENSCPBG00000006753	CSTF3	100	90.390	ENSIPUG00000013170	CSTF3	100	90.390	Ictalurus_punctatus
ENSCPBG00000006753	CSTF3	100	97.354	ENSSTOG00000013306	CSTF3	100	97.354	Ictidomys_tridecemlineatus
ENSCPBG00000006753	CSTF3	99	85.694	ENSJJAG00000018430	Cstf3	99	85.694	Jaculus_jaculus
ENSCPBG00000006753	CSTF3	100	89.833	ENSKMAG00000010916	cstf3	100	89.833	Kryptolebias_marmoratus
ENSCPBG00000006753	CSTF3	100	90.251	ENSLBEG00000002306	cstf3	100	90.251	Labrus_bergylta
ENSCPBG00000006753	CSTF3	100	93.315	ENSLACG00000017296	CSTF3	100	93.315	Latimeria_chalumnae
ENSCPBG00000006753	CSTF3	100	93.593	ENSLOCG00000004415	cstf3	100	93.593	Lepisosteus_oculatus
ENSCPBG00000006753	CSTF3	100	97.632	ENSLAFG00000008712	CSTF3	100	97.632	Loxodonta_africana
ENSCPBG00000006753	CSTF3	100	97.354	ENSMFAG00000029516	CSTF3	100	97.600	Macaca_fascicularis
ENSCPBG00000006753	CSTF3	100	97.354	ENSMMUG00000002542	CSTF3	100	97.354	Macaca_mulatta
ENSCPBG00000006753	CSTF3	100	97.354	ENSMNEG00000021807	CSTF3	100	97.600	Macaca_nemestrina
ENSCPBG00000006753	CSTF3	100	97.354	ENSMLEG00000039594	CSTF3	100	97.600	Mandrillus_leucophaeus
ENSCPBG00000006753	CSTF3	100	91.086	ENSMAMG00000020423	cstf3	100	91.086	Mastacembelus_armatus
ENSCPBG00000006753	CSTF3	98	92.057	ENSMZEG00005012082	cstf3	100	91.365	Maylandia_zebra
ENSCPBG00000006753	CSTF3	100	98.050	ENSMGAG00000001383	CSTF3	100	98.050	Meleagris_gallopavo
ENSCPBG00000006753	CSTF3	100	97.075	ENSMAUG00000002487	Cstf3	100	97.075	Mesocricetus_auratus
ENSCPBG00000006753	CSTF3	100	97.354	ENSMICG00000004784	CSTF3	100	97.600	Microcebus_murinus
ENSCPBG00000006753	CSTF3	100	97.214	ENSMOCG00000017583	Cstf3	100	97.214	Microtus_ochrogaster
ENSCPBG00000006753	CSTF3	99	91.525	ENSMMOG00000016026	cstf3	94	91.525	Mola_mola
ENSCPBG00000006753	CSTF3	99	83.754	ENSMODG00000025205	-	99	83.754	Monodelphis_domestica
ENSCPBG00000006753	CSTF3	100	97.214	ENSMODG00000009745	-	100	97.214	Monodelphis_domestica
ENSCPBG00000006753	CSTF3	100	90.947	ENSMALG00000012050	cstf3	100	90.947	Monopterus_albus
ENSCPBG00000006753	CSTF3	100	97.214	MGP_CAROLIEiJ_G0024026	Cstf3	100	97.214	Mus_caroli
ENSCPBG00000006753	CSTF3	100	97.214	ENSMUSG00000027176	Cstf3	100	97.214	Mus_musculus
ENSCPBG00000006753	CSTF3	100	97.214	MGP_PahariEiJ_G0025464	Cstf3	100	97.214	Mus_pahari
ENSCPBG00000006753	CSTF3	100	97.214	MGP_SPRETEiJ_G0024939	Cstf3	100	97.214	Mus_spretus
ENSCPBG00000006753	CSTF3	100	97.493	ENSMPUG00000011457	CSTF3	100	97.493	Mustela_putorius_furo
ENSCPBG00000006753	CSTF3	100	94.429	ENSMLUG00000026022	-	100	94.429	Myotis_lucifugus
ENSCPBG00000006753	CSTF3	99	97.609	ENSMLUG00000003073	-	99	97.609	Myotis_lucifugus
ENSCPBG00000006753	CSTF3	100	97.493	ENSNGAG00000010677	Cstf3	100	97.493	Nannospalax_galili
ENSCPBG00000006753	CSTF3	87	91.360	ENSNBRG00000007345	cstf3	100	91.360	Neolamprologus_brichardi
ENSCPBG00000006753	CSTF3	100	97.354	ENSNLEG00000017901	CSTF3	100	97.600	Nomascus_leucogenys
ENSCPBG00000006753	CSTF3	73	94.837	ENSMEUG00000005640	-	100	94.837	Notamacropus_eugenii
ENSCPBG00000006753	CSTF3	67	94.737	ENSOPRG00000000199	-	67	94.737	Ochotona_princeps
ENSCPBG00000006753	CSTF3	100	97.354	ENSODEG00000016737	-	100	97.354	Octodon_degus
ENSCPBG00000006753	CSTF3	89	85.377	ENSODEG00000006311	-	97	85.377	Octodon_degus
ENSCPBG00000006753	CSTF3	98	92.057	ENSONIG00000005563	cstf3	100	91.365	Oreochromis_niloticus
ENSCPBG00000006753	CSTF3	90	97.231	ENSOANG00000015140	CSTF3	100	97.231	Ornithorhynchus_anatinus
ENSCPBG00000006753	CSTF3	100	97.354	ENSOCUG00000015417	CSTF3	100	97.354	Oryctolagus_cuniculus
ENSCPBG00000006753	CSTF3	100	90.947	ENSORLG00000009762	cstf3	100	90.947	Oryzias_latipes
ENSCPBG00000006753	CSTF3	100	90.947	ENSORLG00020005540	cstf3	100	90.947	Oryzias_latipes_hni
ENSCPBG00000006753	CSTF3	100	90.808	ENSORLG00015003551	cstf3	100	90.808	Oryzias_latipes_hsok
ENSCPBG00000006753	CSTF3	100	90.669	ENSOMEG00000003848	cstf3	100	90.669	Oryzias_melastigma
ENSCPBG00000006753	CSTF3	100	97.226	ENSOGAG00000010229	CSTF3	100	97.226	Otolemur_garnettii
ENSCPBG00000006753	CSTF3	90	97.512	ENSOARG00000017271	CSTF3	99	97.512	Ovis_aries
ENSCPBG00000006753	CSTF3	99	94.358	ENSPPAG00000027358	CSTF3	99	94.358	Pan_paniscus
ENSCPBG00000006753	CSTF3	100	97.354	ENSPPRG00000016852	CSTF3	100	97.354	Panthera_pardus
ENSCPBG00000006753	CSTF3	100	97.354	ENSPTIG00000008716	CSTF3	100	97.354	Panthera_tigris_altaica
ENSCPBG00000006753	CSTF3	100	97.354	ENSPTRG00000003485	CSTF3	100	97.354	Pan_troglodytes
ENSCPBG00000006753	CSTF3	100	97.354	ENSPANG00000013722	CSTF3	100	97.354	Papio_anubis
ENSCPBG00000006753	CSTF3	100	91.783	ENSPKIG00000023648	cstf3	100	91.783	Paramormyrops_kingsleyae
ENSCPBG00000006753	CSTF3	100	99.025	ENSPSIG00000009173	CSTF3	100	99.025	Pelodiscus_sinensis
ENSCPBG00000006753	CSTF3	76	95.073	ENSPMGG00000000164	cstf3	99	95.073	Periophthalmus_magnuspinnatus
ENSCPBG00000006753	CSTF3	100	97.214	ENSPEMG00000011481	Cstf3	100	97.214	Peromyscus_maniculatus_bairdii
ENSCPBG00000006753	CSTF3	99	80.337	ENSPMAG00000007282	cstf3	100	79.612	Petromyzon_marinus
ENSCPBG00000006753	CSTF3	99	95.211	ENSPCIG00000026406	-	100	97.280	Phascolarctos_cinereus
ENSCPBG00000006753	CSTF3	100	80.529	ENSPCIG00000030419	-	90	80.807	Phascolarctos_cinereus
ENSCPBG00000006753	CSTF3	100	90.808	ENSPFOG00000017239	cstf3	100	90.808	Poecilia_formosa
ENSCPBG00000006753	CSTF3	100	90.808	ENSPLAG00000009456	cstf3	100	90.808	Poecilia_latipinna
ENSCPBG00000006753	CSTF3	100	90.808	ENSPMEG00000010320	cstf3	100	90.808	Poecilia_mexicana
ENSCPBG00000006753	CSTF3	100	90.808	ENSPREG00000013549	cstf3	100	90.808	Poecilia_reticulata
ENSCPBG00000006753	CSTF3	100	97.354	ENSPPYG00000003375	CSTF3	100	97.354	Pongo_abelii
ENSCPBG00000006753	CSTF3	71	99.652	ENSPCAG00000008025	-	71	99.652	Procavia_capensis
ENSCPBG00000006753	CSTF3	100	92.201	ENSPCOG00000014417	CSTF3	100	92.201	Propithecus_coquereli
ENSCPBG00000006753	CSTF3	100	91.922	ENSPVAG00000002350	CSTF3	100	91.922	Pteropus_vampyrus
ENSCPBG00000006753	CSTF3	98	92.057	ENSPNYG00000018259	cstf3	100	91.365	Pundamilia_nyererei
ENSCPBG00000006753	CSTF3	100	92.061	ENSPNAG00000020182	cstf3	100	92.061	Pygocentrus_nattereri
ENSCPBG00000006753	CSTF3	87	97.120	ENSRNOG00000012089	Cstf3	100	97.120	Rattus_norvegicus
ENSCPBG00000006753	CSTF3	99	96.474	ENSRBIG00000044258	CSTF3	100	97.600	Rhinopithecus_bieti
ENSCPBG00000006753	CSTF3	100	97.354	ENSRROG00000043450	CSTF3	100	97.600	Rhinopithecus_roxellana
ENSCPBG00000006753	CSTF3	100	97.354	ENSSBOG00000024764	CSTF3	98	99.778	Saimiri_boliviensis_boliviensis
ENSCPBG00000006753	CSTF3	100	96.379	ENSSHAG00000018128	-	100	96.379	Sarcophilus_harrisii
ENSCPBG00000006753	CSTF3	100	84.958	ENSSHAG00000003135	-	99	84.958	Sarcophilus_harrisii
ENSCPBG00000006753	CSTF3	100	93.315	ENSSFOG00015022133	cstf3	100	93.315	Scleropages_formosus
ENSCPBG00000006753	CSTF3	100	90.529	ENSSMAG00000002197	cstf3	100	90.529	Scophthalmus_maximus
ENSCPBG00000006753	CSTF3	100	91.365	ENSSDUG00000020426	cstf3	100	91.365	Seriola_dumerili
ENSCPBG00000006753	CSTF3	100	91.504	ENSSLDG00000025649	cstf3	100	91.504	Seriola_lalandi_dorsalis
ENSCPBG00000006753	CSTF3	100	97.214	ENSSARG00000000391	CSTF3	100	97.214	Sorex_araneus
ENSCPBG00000006753	CSTF3	96	98.408	ENSSPUG00000010546	CSTF3	100	98.408	Sphenodon_punctatus
ENSCPBG00000006753	CSTF3	100	91.365	ENSSPAG00000004958	cstf3	100	91.365	Stegastes_partitus
ENSCPBG00000006753	CSTF3	99	97.195	ENSSSCG00000040954	CSTF3	99	97.195	Sus_scrofa
ENSCPBG00000006753	CSTF3	99	98.305	ENSTGUG00000005010	CSTF3	100	98.305	Taeniopygia_guttata
ENSCPBG00000006753	CSTF3	100	89.415	ENSTRUG00000004959	cstf3	100	89.415	Takifugu_rubripes
ENSCPBG00000006753	CSTF3	99	90.819	ENSTNIG00000013811	cstf3	98	90.819	Tetraodon_nigroviridis
ENSCPBG00000006753	CSTF3	89	94.704	ENSTBEG00000001544	CSTF3	90	94.704	Tupaia_belangeri
ENSCPBG00000006753	CSTF3	100	94.568	ENSTTRG00000016366	CSTF3	100	94.568	Tursiops_truncatus
ENSCPBG00000006753	CSTF3	99	97.884	ENSUMAG00000018971	CSTF3	100	97.600	Ursus_maritimus
ENSCPBG00000006753	CSTF3	100	97.214	ENSVPAG00000007800	CSTF3	100	97.214	Vicugna_pacos
ENSCPBG00000006753	CSTF3	99	97.884	ENSVVUG00000014938	CSTF3	100	97.600	Vulpes_vulpes
ENSCPBG00000006753	CSTF3	66	43.685	ENSXETG00000017946	-	99	43.685	Xenopus_tropicalis
ENSCPBG00000006753	CSTF3	88	79.688	ENSXETG00000021399	cstf3	100	80.906	Xenopus_tropicalis
ENSCPBG00000006753	CSTF3	87	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSCPBG00000006753	CSTF3	100	90.808	ENSXMAG00000009545	cstf3	100	90.808	Xiphophorus_maculatus