EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000006923 (Gene tree)
Gene ID: 101938350
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 28605 bases
Position: chrKK088197.1:1805079-1833683
Accession: 17631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000008951	RNA_pol_I_A49	PF06870.12	1.3e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000010739	POLR1E-201	2154	-	ENSCPBP00000008951	414 (aa)	XP_008177741	UPI00046C0509

Gene Model

Click here to download ENSCPBG00000006923's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000006923's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000006923	POLR1E	99	66.180	ENSG00000137054	POLR1E	98	65.207	Homo_sapiens
ENSCPBG00000006923	POLR1E	99	43.914	ENSAPOG00000012452	polr1e	99	43.914	Acanthochromis_polyacanthus
ENSCPBG00000006923	POLR1E	99	61.050	ENSAMEG00000010193	POLR1E	82	75.728	Ailuropoda_melanoleuca
ENSCPBG00000006923	POLR1E	94	47.074	ENSACIG00000009884	polr1e	99	46.819	Amphilophus_citrinellus
ENSCPBG00000006923	POLR1E	99	47.255	ENSAOCG00000005665	polr1e	99	47.255	Amphiprion_ocellaris
ENSCPBG00000006923	POLR1E	99	47.017	ENSAPEG00000020581	polr1e	99	47.017	Amphiprion_percula
ENSCPBG00000006923	POLR1E	99	48.210	ENSATEG00000020609	polr1e	99	48.210	Anabas_testudineus
ENSCPBG00000006923	POLR1E	81	65.789	ENSAPLG00000010340	POLR1E	84	85.185	Anas_platyrhynchos
ENSCPBG00000006923	POLR1E	99	65.937	ENSANAG00000038046	POLR1E	98	64.964	Aotus_nancymaae
ENSCPBG00000006923	POLR1E	99	46.635	ENSACLG00000013685	polr1e	99	46.635	Astatotilapia_calliptera
ENSCPBG00000006923	POLR1E	100	42.993	ENSAMXG00000018181	polr1e	100	42.755	Astyanax_mexicanus
ENSCPBG00000006923	POLR1E	99	68.127	ENSBTAG00000012243	POLR1E	98	68.127	Bos_taurus
ENSCPBG00000006923	POLR1E	95	62.341	ENSCJAG00000010512	POLR1E	92	65.668	Callithrix_jacchus
ENSCPBG00000006923	POLR1E	99	67.883	ENSCAFG00000002377	POLR1E	98	67.153	Canis_familiaris
ENSCPBG00000006923	POLR1E	99	68.127	ENSCAFG00020017851	POLR1E	98	67.397	Canis_lupus_dingo
ENSCPBG00000006923	POLR1E	99	66.910	ENSCHIG00000019479	POLR1E	98	65.937	Capra_hircus
ENSCPBG00000006923	POLR1E	99	65.207	ENSTSYG00000002075	POLR1E	98	64.234	Carlito_syrichta
ENSCPBG00000006923	POLR1E	69	67.596	ENSCAPG00000015653	POLR1E	99	67.596	Cavia_aperea
ENSCPBG00000006923	POLR1E	99	67.153	ENSCPOG00000009965	POLR1E	98	66.910	Cavia_porcellus
ENSCPBG00000006923	POLR1E	99	61.707	ENSCCAG00000029460	POLR1E	98	61.707	Cebus_capucinus
ENSCPBG00000006923	POLR1E	99	66.180	ENSCATG00000031732	POLR1E	98	70.874	Cercocebus_atys
ENSCPBG00000006923	POLR1E	87	68.698	ENSCLAG00000012701	POLR1E	95	68.421	Chinchilla_lanigera
ENSCPBG00000006923	POLR1E	99	65.937	ENSCSAG00000010782	POLR1E	98	64.964	Chlorocebus_sabaeus
ENSCPBG00000006923	POLR1E	95	61.832	ENSCHOG00000013024	POLR1E	82	61.832	Choloepus_hoffmanni
ENSCPBG00000006923	POLR1E	99	65.937	ENSCANG00000036112	POLR1E	96	70.874	Colobus_angolensis_palliatus
ENSCPBG00000006923	POLR1E	99	66.180	ENSCGRG00001006197	Polr1e	95	66.180	Cricetulus_griseus_chok1gshd
ENSCPBG00000006923	POLR1E	99	65.693	ENSCGRG00000006430	Polr1e	95	65.693	Cricetulus_griseus_crigri
ENSCPBG00000006923	POLR1E	99	44.471	ENSCSEG00000005121	polr1e	99	44.231	Cynoglossus_semilaevis
ENSCPBG00000006923	POLR1E	99	44.391	ENSCVAG00000019759	polr1e	99	43.943	Cyprinodon_variegatus
ENSCPBG00000006923	POLR1E	97	44.444	ENSDARG00000006434	polr1e	99	43.645	Danio_rerio
ENSCPBG00000006923	POLR1E	99	59.871	ENSDNOG00000010257	POLR1E	99	56.867	Dasypus_novemcinctus
ENSCPBG00000006923	POLR1E	86	62.921	ENSETEG00000018204	POLR1E	99	61.798	Echinops_telfairi
ENSCPBG00000006923	POLR1E	99	67.397	ENSEASG00005000675	POLR1E	98	66.423	Equus_asinus_asinus
ENSCPBG00000006923	POLR1E	99	67.397	ENSECAG00000014669	POLR1E	98	66.423	Equus_caballus
ENSCPBG00000006923	POLR1E	95	58.270	ENSEEUG00000011928	POLR1E	84	58.015	Erinaceus_europaeus
ENSCPBG00000006923	POLR1E	96	47.160	ENSELUG00000008150	polr1e	95	47.174	Esox_lucius
ENSCPBG00000006923	POLR1E	99	65.777	ENSFCAG00000013081	POLR1E	98	64.806	Felis_catus
ENSCPBG00000006923	POLR1E	96	72.727	ENSFALG00000012950	POLR1E	99	72.727	Ficedula_albicollis
ENSCPBG00000006923	POLR1E	99	66.180	ENSFDAG00000016917	POLR1E	98	65.937	Fukomys_damarensis
ENSCPBG00000006923	POLR1E	99	45.084	ENSFHEG00000009801	polr1e	99	45.084	Fundulus_heteroclitus
ENSCPBG00000006923	POLR1E	97	38.257	ENSGMOG00000003336	POLR1E	96	38.257	Gadus_morhua
ENSCPBG00000006923	POLR1E	99	72.993	ENSGALG00000005395	POLR1E	99	72.993	Gallus_gallus
ENSCPBG00000006923	POLR1E	99	44.391	ENSGAFG00000004850	polr1e	99	44.391	Gambusia_affinis
ENSCPBG00000006923	POLR1E	99	42.280	ENSGACG00000016087	polr1e	99	41.905	Gasterosteus_aculeatus
ENSCPBG00000006923	POLR1E	98	83.047	ENSGAGG00000001659	POLR1E	99	82.324	Gopherus_agassizii
ENSCPBG00000006923	POLR1E	99	65.942	ENSGGOG00000001882	POLR1E	99	69.811	Gorilla_gorilla
ENSCPBG00000006923	POLR1E	99	46.635	ENSHBUG00000002559	polr1e	99	46.635	Haplochromis_burtoni
ENSCPBG00000006923	POLR1E	99	66.586	ENSHGLG00000002036	POLR1E	98	66.344	Heterocephalus_glaber_female
ENSCPBG00000006923	POLR1E	99	66.828	ENSHGLG00100012784	POLR1E	98	66.586	Heterocephalus_glaber_male
ENSCPBG00000006923	POLR1E	99	45.564	ENSHCOG00000002774	polr1e	99	45.803	Hippocampus_comes
ENSCPBG00000006923	POLR1E	100	43.810	ENSIPUG00000003019	polr1e	100	43.810	Ictalurus_punctatus
ENSCPBG00000006923	POLR1E	99	67.153	ENSSTOG00000009810	POLR1E	99	66.180	Ictidomys_tridecemlineatus
ENSCPBG00000006923	POLR1E	99	65.854	ENSJJAG00000020731	Polr1e	94	65.610	Jaculus_jaculus
ENSCPBG00000006923	POLR1E	99	41.667	ENSKMAG00000000046	polr1e	99	41.667	Kryptolebias_marmoratus
ENSCPBG00000006923	POLR1E	100	47.470	ENSLBEG00000003104	polr1e	99	47.470	Labrus_bergylta
ENSCPBG00000006923	POLR1E	86	64.444	ENSLACG00000003416	POLR1E	99	64.444	Latimeria_chalumnae
ENSCPBG00000006923	POLR1E	99	50.361	ENSLOCG00000012859	polr1e	99	50.361	Lepisosteus_oculatus
ENSCPBG00000006923	POLR1E	99	68.127	ENSLAFG00000012831	POLR1E	98	67.153	Loxodonta_africana
ENSCPBG00000006923	POLR1E	99	66.180	ENSMFAG00000045465	POLR1E	98	70.874	Macaca_fascicularis
ENSCPBG00000006923	POLR1E	99	66.180	ENSMMUG00000017892	POLR1E	98	70.874	Macaca_mulatta
ENSCPBG00000006923	POLR1E	99	61.283	ENSMNEG00000040283	POLR1E	98	60.808	Macaca_nemestrina
ENSCPBG00000006923	POLR1E	99	66.180	ENSMLEG00000031135	POLR1E	98	70.874	Mandrillus_leucophaeus
ENSCPBG00000006923	POLR1E	100	44.286	ENSMAMG00000001260	polr1e	99	44.286	Mastacembelus_armatus
ENSCPBG00000006923	POLR1E	99	46.154	ENSMZEG00005021536	polr1e	99	46.154	Maylandia_zebra
ENSCPBG00000006923	POLR1E	99	66.423	ENSMAUG00000021044	Polr1e	95	66.423	Mesocricetus_auratus
ENSCPBG00000006923	POLR1E	99	68.127	ENSMICG00000003673	POLR1E	98	67.153	Microcebus_murinus
ENSCPBG00000006923	POLR1E	99	66.585	ENSMOCG00000012920	Polr1e	94	66.098	Microtus_ochrogaster
ENSCPBG00000006923	POLR1E	94	47.222	ENSMMOG00000007391	polr1e	96	47.222	Mola_mola
ENSCPBG00000006923	POLR1E	99	68.689	ENSMODG00000002884	POLR1E	100	67.476	Monodelphis_domestica
ENSCPBG00000006923	POLR1E	99	45.803	ENSMALG00000002665	polr1e	99	45.433	Monopterus_albus
ENSCPBG00000006923	POLR1E	99	63.171	MGP_CAROLIEiJ_G0025967	Polr1e	97	64.031	Mus_caroli
ENSCPBG00000006923	POLR1E	99	64.234	ENSMUSG00000028318	Polr1e	97	64.885	Mus_musculus
ENSCPBG00000006923	POLR1E	99	65.207	MGP_PahariEiJ_G0024114	Polr1e	97	65.903	Mus_pahari
ENSCPBG00000006923	POLR1E	99	63.747	MGP_SPRETEiJ_G0026930	Polr1e	97	64.377	Mus_spretus
ENSCPBG00000006923	POLR1E	99	61.388	ENSMPUG00000006040	POLR1E	98	59.436	Mustela_putorius_furo
ENSCPBG00000006923	POLR1E	99	65.937	ENSMLUG00000012688	POLR1E	95	65.937	Myotis_lucifugus
ENSCPBG00000006923	POLR1E	99	67.317	ENSNGAG00000002520	Polr1e	94	67.073	Nannospalax_galili
ENSCPBG00000006923	POLR1E	99	46.394	ENSNBRG00000016822	polr1e	99	46.394	Neolamprologus_brichardi
ENSCPBG00000006923	POLR1E	99	66.180	ENSNLEG00000003616	POLR1E	98	69.903	Nomascus_leucogenys
ENSCPBG00000006923	POLR1E	73	72.500	ENSMEUG00000015372	-	80	72.500	Notamacropus_eugenii
ENSCPBG00000006923	POLR1E	86	57.703	ENSOPRG00000014206	POLR1E	99	57.423	Ochotona_princeps
ENSCPBG00000006923	POLR1E	99	67.805	ENSODEG00000014565	POLR1E	95	67.561	Octodon_degus
ENSCPBG00000006923	POLR1E	99	46.651	ENSONIG00000008921	polr1e	99	46.635	Oreochromis_niloticus
ENSCPBG00000006923	POLR1E	99	68.127	ENSOCUG00000024773	POLR1E	98	68.127	Oryctolagus_cuniculus
ENSCPBG00000006923	POLR1E	99	46.283	ENSORLG00000005143	polr1e	99	46.283	Oryzias_latipes
ENSCPBG00000006923	POLR1E	93	46.770	ENSORLG00020007271	polr1e	99	46.770	Oryzias_latipes_hni
ENSCPBG00000006923	POLR1E	99	45.803	ENSORLG00015000137	polr1e	99	45.803	Oryzias_latipes_hsok
ENSCPBG00000006923	POLR1E	99	45.933	ENSOMEG00000013264	polr1e	98	45.933	Oryzias_melastigma
ENSCPBG00000006923	POLR1E	99	67.640	ENSOGAG00000012981	POLR1E	96	66.667	Otolemur_garnettii
ENSCPBG00000006923	POLR1E	99	66.910	ENSOARG00000011465	POLR1E	95	65.937	Ovis_aries
ENSCPBG00000006923	POLR1E	99	65.937	ENSPPAG00000034566	POLR1E	98	70.874	Pan_paniscus
ENSCPBG00000006923	POLR1E	99	66.262	ENSPPRG00000005649	POLR1E	98	65.291	Panthera_pardus
ENSCPBG00000006923	POLR1E	99	66.505	ENSPTIG00000009774	POLR1E	98	65.534	Panthera_tigris_altaica
ENSCPBG00000006923	POLR1E	99	65.937	ENSPTRG00000020944	POLR1E	98	70.874	Pan_troglodytes
ENSCPBG00000006923	POLR1E	99	66.180	ENSPANG00000025563	POLR1E	98	70.874	Papio_anubis
ENSCPBG00000006923	POLR1E	99	47.143	ENSPKIG00000003562	polr1e	99	47.143	Paramormyrops_kingsleyae
ENSCPBG00000006923	POLR1E	95	80.662	ENSPSIG00000003274	POLR1E	92	80.662	Pelodiscus_sinensis
ENSCPBG00000006923	POLR1E	95	45.885	ENSPMGG00000024169	polr1e	96	45.636	Periophthalmus_magnuspinnatus
ENSCPBG00000006923	POLR1E	99	55.231	ENSPEMG00000022300	-	94	55.231	Peromyscus_maniculatus_bairdii
ENSCPBG00000006923	POLR1E	99	66.667	ENSPEMG00000019151	-	95	66.667	Peromyscus_maniculatus_bairdii
ENSCPBG00000006923	POLR1E	99	68.856	ENSPCIG00000014798	POLR1E	99	67.640	Phascolarctos_cinereus
ENSCPBG00000006923	POLR1E	99	43.468	ENSPFOG00000019627	polr1e	99	43.468	Poecilia_formosa
ENSCPBG00000006923	POLR1E	99	46.062	ENSPLAG00000022679	polr1e	99	46.062	Poecilia_latipinna
ENSCPBG00000006923	POLR1E	86	46.006	ENSPMEG00000022123	polr1e	93	46.006	Poecilia_mexicana
ENSCPBG00000006923	POLR1E	99	45.823	ENSPREG00000009470	polr1e	99	45.823	Poecilia_reticulata
ENSCPBG00000006923	POLR1E	99	65.937	ENSPPYG00000019061	POLR1E	98	64.964	Pongo_abelii
ENSCPBG00000006923	POLR1E	57	64.681	ENSPCAG00000004891	POLR1E	77	64.681	Procavia_capensis
ENSCPBG00000006923	POLR1E	99	67.883	ENSPCOG00000027448	POLR1E	98	66.910	Propithecus_coquereli
ENSCPBG00000006923	POLR1E	95	69.211	ENSPVAG00000007940	POLR1E	83	68.448	Pteropus_vampyrus
ENSCPBG00000006923	POLR1E	99	46.635	ENSPNYG00000001032	polr1e	99	46.635	Pundamilia_nyererei
ENSCPBG00000006923	POLR1E	97	43.532	ENSPNAG00000006987	polr1e	96	43.392	Pygocentrus_nattereri
ENSCPBG00000006923	POLR1E	99	64.964	ENSRNOG00000012664	Polr1e	95	64.964	Rattus_norvegicus
ENSCPBG00000006923	POLR1E	97	65.842	ENSRBIG00000034214	POLR1E	99	65.789	Rhinopithecus_bieti
ENSCPBG00000006923	POLR1E	99	66.423	ENSRROG00000031986	POLR1E	98	70.874	Rhinopithecus_roxellana
ENSCPBG00000006923	POLR1E	99	66.341	ENSSBOG00000021415	POLR1E	98	65.366	Saimiri_boliviensis_boliviensis
ENSCPBG00000006923	POLR1E	83	69.096	ENSSHAG00000016084	POLR1E	96	69.096	Sarcophilus_harrisii
ENSCPBG00000006923	POLR1E	100	48.441	ENSSFOG00015002293	polr1e	100	48.201	Scleropages_formosus
ENSCPBG00000006923	POLR1E	99	47.971	ENSSMAG00000011672	polr1e	93	47.733	Scophthalmus_maximus
ENSCPBG00000006923	POLR1E	99	46.651	ENSSDUG00000022279	polr1e	99	46.651	Seriola_dumerili
ENSCPBG00000006923	POLR1E	99	46.301	ENSSLDG00000024918	polr1e	99	46.539	Seriola_lalandi_dorsalis
ENSCPBG00000006923	POLR1E	64	74.286	ENSSARG00000009810	-	66	74.286	Sorex_araneus
ENSCPBG00000006923	POLR1E	99	78.554	ENSSPUG00000009499	POLR1E	99	78.554	Sphenodon_punctatus
ENSCPBG00000006923	POLR1E	99	46.539	ENSSPAG00000021240	polr1e	99	46.301	Stegastes_partitus
ENSCPBG00000006923	POLR1E	99	67.397	ENSSSCG00000005347	POLR1E	98	66.667	Sus_scrofa
ENSCPBG00000006923	POLR1E	91	70.979	ENSTGUG00000007169	POLR1E	84	70.979	Taeniopygia_guttata
ENSCPBG00000006923	POLR1E	100	46.062	ENSTRUG00000020779	polr1e	100	46.982	Takifugu_rubripes
ENSCPBG00000006923	POLR1E	100	47.754	ENSTNIG00000017812	polr1e	100	47.255	Tetraodon_nigroviridis
ENSCPBG00000006923	POLR1E	95	69.211	ENSTBEG00000013786	POLR1E	84	68.702	Tupaia_belangeri
ENSCPBG00000006923	POLR1E	95	68.182	ENSTTRG00000008294	POLR1E	84	67.677	Tursiops_truncatus
ENSCPBG00000006923	POLR1E	99	67.397	ENSUAMG00000012474	POLR1E	98	68.333	Ursus_americanus
ENSCPBG00000006923	POLR1E	99	67.397	ENSUMAG00000011496	POLR1E	98	66.423	Ursus_maritimus
ENSCPBG00000006923	POLR1E	82	66.471	ENSVPAG00000009048	POLR1E	81	65.882	Vicugna_pacos
ENSCPBG00000006923	POLR1E	99	68.537	ENSVVUG00000019954	POLR1E	98	67.805	Vulpes_vulpes
ENSCPBG00000006923	POLR1E	99	56.115	ENSXETG00000006533	polr1e	99	55.396	Xenopus_tropicalis
ENSCPBG00000006923	POLR1E	99	44.630	ENSXCOG00000013706	polr1e	99	44.153	Xiphophorus_couchianus
ENSCPBG00000006923	POLR1E	99	46.301	ENSXMAG00000012484	polr1e	99	46.301	Xiphophorus_maculatus