EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000007170 (Gene tree)
Gene ID: 101941520
Gene Symbol: SYMPK
Alias: SPK|SYM
Full Name: symplekin
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 20615 bases
Position: chrKK083101.1:1617147-1637761
Accession: 22935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000009280	Symplekin_C	PF12295.8	3.1e-74	1	1
ENSCPBP00000009267	Symplekin_C	PF12295.8	3.3e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000011152	SYMPK-202	4287	-	ENSCPBP00000009280	1254 (aa)	-	-
ENSCPBT00000011136	SYMPK-201	4158	XM_005283742	ENSCPBP00000009267	1285 (aa)	XP_005283799	UPI0003891793

Gene Model

Click here to download ENSCPBG00000007170's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03015	mRNA surveillance pathway	KEGG
cpic04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000007170's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000007170	SYMPK	98	84.455	ENSG00000125755	SYMPK	100	88.811	Homo_sapiens
ENSCPBG00000007170	SYMPK	86	76.562	ENSAPOG00000015934	sympk	99	74.332	Acanthochromis_polyacanthus
ENSCPBG00000007170	SYMPK	98	84.000	ENSAMEG00000000680	SYMPK	99	82.029	Ailuropoda_melanoleuca
ENSCPBG00000007170	SYMPK	86	75.138	ENSACIG00000006357	sympk	97	71.698	Amphilophus_citrinellus
ENSCPBG00000007170	SYMPK	91	71.549	ENSAOCG00000024124	sympk	97	72.500	Amphiprion_ocellaris
ENSCPBG00000007170	SYMPK	86	76.287	ENSAPEG00000003465	sympk	88	76.190	Amphiprion_percula
ENSCPBG00000007170	SYMPK	88	74.978	ENSATEG00000008472	sympk	89	75.543	Anabas_testudineus
ENSCPBG00000007170	SYMPK	89	85.185	ENSACAG00000004126	SYMPK	100	82.113	Anolis_carolinensis
ENSCPBG00000007170	SYMPK	98	84.510	ENSANAG00000021087	SYMPK	99	88.235	Aotus_nancymaae
ENSCPBG00000007170	SYMPK	88	75.543	ENSACLG00000001813	sympk	90	75.543	Astatotilapia_calliptera
ENSCPBG00000007170	SYMPK	90	73.111	ENSAMXG00000013677	sympk	90	73.886	Astyanax_mexicanus
ENSCPBG00000007170	SYMPK	98	83.708	ENSBTAG00000012101	SYMPK	100	81.496	Bos_taurus
ENSCPBG00000007170	SYMPK	93	87.020	ENSCJAG00000012172	SYMPK	99	86.368	Callithrix_jacchus
ENSCPBG00000007170	SYMPK	98	83.879	ENSCAFG00000004376	SYMPK	100	81.399	Canis_familiaris
ENSCPBG00000007170	SYMPK	98	83.879	ENSCAFG00020001815	SYMPK	100	81.399	Canis_lupus_dingo
ENSCPBG00000007170	SYMPK	98	83.962	ENSCHIG00000026784	SYMPK	100	81.419	Capra_hircus
ENSCPBG00000007170	SYMPK	99	82.859	ENSTSYG00000006268	SYMPK	100	87.302	Carlito_syrichta
ENSCPBG00000007170	SYMPK	85	85.196	ENSCAPG00000005112	SYMPK	96	85.196	Cavia_aperea
ENSCPBG00000007170	SYMPK	99	80.760	ENSCPOG00000010434	SYMPK	93	85.482	Cavia_porcellus
ENSCPBG00000007170	SYMPK	98	84.578	ENSCCAG00000036309	SYMPK	99	88.241	Cebus_capucinus
ENSCPBG00000007170	SYMPK	98	84.038	ENSCATG00000045107	SYMPK	100	88.095	Cercocebus_atys
ENSCPBG00000007170	SYMPK	98	85.299	ENSCLAG00000001206	SYMPK	99	82.622	Chinchilla_lanigera
ENSCPBG00000007170	SYMPK	98	84.105	ENSCSAG00000003115	SYMPK	99	82.157	Chlorocebus_sabaeus
ENSCPBG00000007170	SYMPK	71	100.000	ENSCHOG00000012456	SYMPK	80	100.000	Choloepus_hoffmanni
ENSCPBG00000007170	SYMPK	85	48.876	ENSCING00000021232	-	96	48.596	Ciona_intestinalis
ENSCPBG00000007170	SYMPK	83	47.948	ENSCSAVG00000005154	-	100	47.854	Ciona_savignyi
ENSCPBG00000007170	SYMPK	98	82.259	ENSCANG00000040907	SYMPK	99	88.095	Colobus_angolensis_palliatus
ENSCPBG00000007170	SYMPK	89	83.505	ENSCGRG00001010086	Sympk	99	83.196	Cricetulus_griseus_chok1gshd
ENSCPBG00000007170	SYMPK	89	74.332	ENSCSEG00000016802	sympk	97	70.116	Cynoglossus_semilaevis
ENSCPBG00000007170	SYMPK	90	71.880	ENSDARG00000059553	sympk	88	72.890	Danio_rerio
ENSCPBG00000007170	SYMPK	99	83.910	ENSDNOG00000016149	SYMPK	98	82.609	Dasypus_novemcinctus
ENSCPBG00000007170	SYMPK	87	36.931	FBgn0037371	Sym	94	36.931	Drosophila_melanogaster
ENSCPBG00000007170	SYMPK	71	59.471	ENSEBUG00000000387	sympk	89	60.850	Eptatretus_burgeri
ENSCPBG00000007170	SYMPK	98	84.393	ENSEASG00005014227	SYMPK	100	82.190	Equus_asinus_asinus
ENSCPBG00000007170	SYMPK	98	84.393	ENSECAG00000008163	SYMPK	100	82.190	Equus_caballus
ENSCPBG00000007170	SYMPK	71	82.451	ENSEEUG00000000270	-	81	82.451	Erinaceus_europaeus
ENSCPBG00000007170	SYMPK	89	74.755	ENSELUG00000000850	sympk	88	74.755	Esox_lucius
ENSCPBG00000007170	SYMPK	99	87.423	ENSFCAG00000007337	SYMPK	100	81.658	Felis_catus
ENSCPBG00000007170	SYMPK	98	84.541	ENSFDAG00000011272	SYMPK	99	82.724	Fukomys_damarensis
ENSCPBG00000007170	SYMPK	88	74.977	ENSFHEG00000010274	sympk	93	71.806	Fundulus_heteroclitus
ENSCPBG00000007170	SYMPK	86	73.339	ENSGMOG00000002357	sympk	99	73.339	Gadus_morhua
ENSCPBG00000007170	SYMPK	88	74.503	ENSGAFG00000010976	sympk	89	75.092	Gambusia_affinis
ENSCPBG00000007170	SYMPK	88	73.694	ENSGACG00000002735	sympk	97	74.359	Gasterosteus_aculeatus
ENSCPBG00000007170	SYMPK	68	93.111	ENSGAGG00000012538	-	93	93.111	Gopherus_agassizii
ENSCPBG00000007170	SYMPK	98	84.295	ENSGGOG00000003410	SYMPK	100	88.095	Gorilla_gorilla
ENSCPBG00000007170	SYMPK	88	75.203	ENSHBUG00000023564	sympk	90	75.203	Haplochromis_burtoni
ENSCPBG00000007170	SYMPK	98	80.097	ENSHGLG00000005228	SYMPK	99	78.349	Heterocephalus_glaber_female
ENSCPBG00000007170	SYMPK	98	83.660	ENSHGLG00100018571	SYMPK	99	82.334	Heterocephalus_glaber_male
ENSCPBG00000007170	SYMPK	88	70.243	ENSHCOG00000017400	sympk	90	71.113	Hippocampus_comes
ENSCPBG00000007170	SYMPK	88	74.304	ENSIPUG00000024020	SYMPK	89	74.304	Ictalurus_punctatus
ENSCPBG00000007170	SYMPK	98	84.591	ENSSTOG00000001534	SYMPK	100	82.022	Ictidomys_tridecemlineatus
ENSCPBG00000007170	SYMPK	98	84.480	ENSJJAG00000006633	Sympk	99	82.430	Jaculus_jaculus
ENSCPBG00000007170	SYMPK	87	74.818	ENSKMAG00000016292	sympk	89	75.114	Kryptolebias_marmoratus
ENSCPBG00000007170	SYMPK	87	75.985	ENSLBEG00000027913	sympk	95	72.316	Labrus_bergylta
ENSCPBG00000007170	SYMPK	96	72.231	ENSLACG00000016497	SYMPK	99	72.533	Latimeria_chalumnae
ENSCPBG00000007170	SYMPK	98	83.719	ENSLAFG00000008726	SYMPK	100	81.288	Loxodonta_africana
ENSCPBG00000007170	SYMPK	98	84.026	ENSMMUG00000015428	SYMPK	100	88.095	Macaca_mulatta
ENSCPBG00000007170	SYMPK	98	84.198	ENSMNEG00000019439	SYMPK	100	88.095	Macaca_nemestrina
ENSCPBG00000007170	SYMPK	98	84.198	ENSMLEG00000040508	SYMPK	100	88.095	Mandrillus_leucophaeus
ENSCPBG00000007170	SYMPK	88	75.023	ENSMAMG00000010486	sympk	89	75.641	Mastacembelus_armatus
ENSCPBG00000007170	SYMPK	88	75.543	ENSMZEG00005014146	sympk	90	75.543	Maylandia_zebra
ENSCPBG00000007170	SYMPK	98	82.811	ENSMAUG00000015657	Sympk	99	81.328	Mesocricetus_auratus
ENSCPBG00000007170	SYMPK	98	83.827	ENSMICG00000001871	SYMPK	100	86.508	Microcebus_murinus
ENSCPBG00000007170	SYMPK	98	83.532	ENSMOCG00000008388	Sympk	98	82.381	Microtus_ochrogaster
ENSCPBG00000007170	SYMPK	95	69.244	ENSMMOG00000019227	sympk	93	73.297	Mola_mola
ENSCPBG00000007170	SYMPK	98	84.509	ENSMODG00000021534	SYMPK	96	84.509	Monodelphis_domestica
ENSCPBG00000007170	SYMPK	75	70.327	ENSMALG00000008347	sympk	96	70.644	Monopterus_albus
ENSCPBG00000007170	SYMPK	99	83.492	MGP_CAROLIEiJ_G0029267	Sympk	98	82.952	Mus_caroli
ENSCPBG00000007170	SYMPK	99	82.886	ENSMUSG00000023118	Sympk	98	82.275	Mus_musculus
ENSCPBG00000007170	SYMPK	99	83.134	MGP_PahariEiJ_G0021127	Sympk	98	82.911	Mus_pahari
ENSCPBG00000007170	SYMPK	99	83.373	MGP_SPRETEiJ_G0030351	-	98	82.911	Mus_spretus
ENSCPBG00000007170	SYMPK	98	82.720	ENSMPUG00000005505	SYMPK	100	80.323	Mustela_putorius_furo
ENSCPBG00000007170	SYMPK	80	81.719	ENSMLUG00000001359	SYMPK	99	81.126	Myotis_lucifugus
ENSCPBG00000007170	SYMPK	98	84.566	ENSNGAG00000000820	Sympk	97	84.325	Nannospalax_galili
ENSCPBG00000007170	SYMPK	84	75.914	ENSNBRG00000018101	sympk	91	75.914	Neolamprologus_brichardi
ENSCPBG00000007170	SYMPK	100	64.706	ENSNLEG00000002369	SYMPK	100	70.597	Nomascus_leucogenys
ENSCPBG00000007170	SYMPK	80	82.682	ENSMEUG00000003866	SYMPK	81	81.261	Notamacropus_eugenii
ENSCPBG00000007170	SYMPK	98	81.550	ENSOPRG00000009967	SYMPK	100	79.263	Ochotona_princeps
ENSCPBG00000007170	SYMPK	98	84.739	ENSODEG00000007519	SYMPK	99	82.595	Octodon_degus
ENSCPBG00000007170	SYMPK	88	74.352	ENSONIG00000016802	sympk	95	74.932	Oreochromis_niloticus
ENSCPBG00000007170	SYMPK	78	86.783	ENSOCUG00000005511	SYMPK	90	86.783	Oryctolagus_cuniculus
ENSCPBG00000007170	SYMPK	88	75.226	ENSORLG00000015338	sympk	97	73.990	Oryzias_latipes
ENSCPBG00000007170	SYMPK	88	75.136	ENSORLG00020004402	sympk	91	75.136	Oryzias_latipes_hni
ENSCPBG00000007170	SYMPK	88	75.226	ENSORLG00015005712	sympk	90	75.226	Oryzias_latipes_hsok
ENSCPBG00000007170	SYMPK	87	75.802	ENSOMEG00000022561	sympk	90	75.501	Oryzias_melastigma
ENSCPBG00000007170	SYMPK	98	84.215	ENSOGAG00000013483	SYMPK	100	81.832	Otolemur_garnettii
ENSCPBG00000007170	SYMPK	98	80.544	ENSOARG00000010349	SYMPK	100	78.335	Ovis_aries
ENSCPBG00000007170	SYMPK	98	84.455	ENSPPAG00000043204	SYMPK	100	88.095	Pan_paniscus
ENSCPBG00000007170	SYMPK	98	84.215	ENSPPRG00000004282	SYMPK	100	81.658	Panthera_pardus
ENSCPBG00000007170	SYMPK	98	83.239	ENSPTIG00000015420	SYMPK	93	88.136	Panthera_tigris_altaica
ENSCPBG00000007170	SYMPK	98	84.455	ENSPTRG00000011169	SYMPK	100	88.095	Pan_troglodytes
ENSCPBG00000007170	SYMPK	98	83.958	ENSPANG00000019930	SYMPK	100	88.095	Papio_anubis
ENSCPBG00000007170	SYMPK	89	75.893	ENSPKIG00000017132	sympk	96	72.029	Paramormyrops_kingsleyae
ENSCPBG00000007170	SYMPK	98	83.599	ENSPEMG00000007564	Sympk	99	82.051	Peromyscus_maniculatus_bairdii
ENSCPBG00000007170	SYMPK	82	64.909	ENSPMAG00000004936	sympk	100	65.388	Petromyzon_marinus
ENSCPBG00000007170	SYMPK	98	85.077	ENSPCIG00000024476	SYMPK	99	82.463	Phascolarctos_cinereus
ENSCPBG00000007170	SYMPK	86	75.368	ENSPFOG00000001194	sympk	89	75.368	Poecilia_formosa
ENSCPBG00000007170	SYMPK	86	75.368	ENSPLAG00000012995	sympk	89	75.368	Poecilia_latipinna
ENSCPBG00000007170	SYMPK	86	75.276	ENSPMEG00000008099	sympk	96	71.030	Poecilia_mexicana
ENSCPBG00000007170	SYMPK	84	75.184	ENSPREG00000006176	sympk	98	70.000	Poecilia_reticulata
ENSCPBG00000007170	SYMPK	89	87.903	ENSPPYG00000010135	SYMPK	99	87.903	Pongo_abelii
ENSCPBG00000007170	SYMPK	92	78.291	ENSPCAG00000005182	SYMPK	94	76.094	Procavia_capensis
ENSCPBG00000007170	SYMPK	98	84.227	ENSPCOG00000023740	SYMPK	100	87.302	Propithecus_coquereli
ENSCPBG00000007170	SYMPK	98	82.612	ENSPVAG00000001355	SYMPK	100	81.941	Pteropus_vampyrus
ENSCPBG00000007170	SYMPK	88	74.932	ENSPNYG00000011455	sympk	89	74.932	Pundamilia_nyererei
ENSCPBG00000007170	SYMPK	89	74.176	ENSPNAG00000016505	sympk	89	74.176	Pygocentrus_nattereri
ENSCPBG00000007170	SYMPK	98	83.373	ENSRNOG00000014353	Sympk	99	81.522	Rattus_norvegicus
ENSCPBG00000007170	SYMPK	98	84.118	ENSRBIG00000040963	SYMPK	99	88.202	Rhinopithecus_bieti
ENSCPBG00000007170	SYMPK	100	82.041	ENSRROG00000024834	SYMPK	97	87.873	Rhinopithecus_roxellana
ENSCPBG00000007170	SYMPK	98	84.578	ENSSBOG00000034497	SYMPK	100	88.095	Saimiri_boliviensis_boliviensis
ENSCPBG00000007170	SYMPK	92	85.900	ENSSHAG00000003139	SYMPK	100	85.813	Sarcophilus_harrisii
ENSCPBG00000007170	SYMPK	89	75.597	ENSSFOG00015006974	sympk	90	75.597	Scleropages_formosus
ENSCPBG00000007170	SYMPK	89	74.888	ENSSMAG00000018130	sympk	72	75.636	Scophthalmus_maximus
ENSCPBG00000007170	SYMPK	94	71.369	ENSSDUG00000007092	sympk	90	75.725	Seriola_dumerili
ENSCPBG00000007170	SYMPK	94	71.369	ENSSLDG00000014774	sympk	96	72.746	Seriola_lalandi_dorsalis
ENSCPBG00000007170	SYMPK	60	98.462	ENSSARG00000004274	-	63	98.462	Sorex_araneus
ENSCPBG00000007170	SYMPK	99	89.614	ENSSPUG00000002789	SYMPK	99	87.433	Sphenodon_punctatus
ENSCPBG00000007170	SYMPK	87	76.330	ENSSPAG00000000854	sympk	89	76.186	Stegastes_partitus
ENSCPBG00000007170	SYMPK	98	84.109	ENSSSCG00000003093	SYMPK	99	82.284	Sus_scrofa
ENSCPBG00000007170	SYMPK	89	74.710	ENSTRUG00000010202	sympk	97	71.380	Takifugu_rubripes
ENSCPBG00000007170	SYMPK	87	74.431	ENSTNIG00000017855	sympk	97	74.431	Tetraodon_nigroviridis
ENSCPBG00000007170	SYMPK	89	92.208	ENSTBEG00000000454	SYMPK	88	92.208	Tupaia_belangeri
ENSCPBG00000007170	SYMPK	100	73.636	ENSTTRG00000014311	SYMPK	100	73.405	Tursiops_truncatus
ENSCPBG00000007170	SYMPK	98	82.358	ENSUAMG00000022272	SYMPK	95	86.526	Ursus_americanus
ENSCPBG00000007170	SYMPK	98	84.202	ENSUMAG00000023698	SYMPK	100	81.818	Ursus_maritimus
ENSCPBG00000007170	SYMPK	89	88.136	ENSVVUG00000003024	SYMPK	97	88.136	Vulpes_vulpes
ENSCPBG00000007170	SYMPK	96	69.429	ENSXETG00000024453	sympk	97	71.644	Xenopus_tropicalis
ENSCPBG00000007170	SYMPK	86	73.781	ENSXCOG00000015368	sympk	99	73.781	Xiphophorus_couchianus
ENSCPBG00000007170	SYMPK	88	74.819	ENSXMAG00000005737	sympk	89	75.460	Xiphophorus_maculatus